EnhancerDB
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Enhancers that regulate VPS33A[ENSG00000139719.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 122681575 122681727 vista15204 122751068 69341
VISTA
chr12 122771781 122771848 vista15205 122751068 20713
VISTA
chr12 122775725 122779875 enh103813 122751068 24657
Peripheral Blood (MM.1S)
chr12 122787585 122793995 enh2659 122751068 36517
Prostate (PC-3) Blood (Karpas-422) Epithelial (MCF-7)
chr12 122849366 122861555 enh15067 122751068 98298
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript facotrs that regulate VPS33A[ENSG00000139719.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with VPS33A[ENSG00000139719.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 122750578 rs143536384 T C 0 Esophagus 0.0354182 2957596
chr12 122777467 rs61954383 A G 26399 Esophagus 0.00157698 2957639
chr12 122775893 rs61954382 T G 24825 Heart 0.0295401 2957621
chr12 122220311 rs555062552 A T 493800 Pancreas 0.390354 2955007
chr12 123145864 rs2245199 C T 394796 Adrenal 0.139545 2959324
Details of VPS33A[ENSG00000139719.5]
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Genomic Location chr12:122714111-122751068[-]
TSS 122751068
Gene Name VPS33A
Ensembl ID ENSG00000139719.5
ENTREZID 65082
Uniprot
Q96AX1
Protein Name
Alternative protein VPS33A
Vacuolar protein sorting-associated protein 33A
Expression levels of VPS33A[ENSG00000139719.5]
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