EnhancerDB
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Enhancers that regulate GPN2[ENSG00000142751.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 27122205 27134409 enh26588 27216788 82379
Prostate (PC-3) Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Blood (T-cell)
chr1 27134625 27140735 enh11656 27216788 76053
Placenta Blood (T-cell) Lung (PC-9)
chr1 27154485 27154771 vista885 27216788 62017
VISTA
chr1 27154983 27155478 vista886 27216788 61310
VISTA
chr1 27160002 27160387 vista887 27216788 56401
VISTA
chr1 27163365 27169395 enh92037 27216788 47393
Liver (HepG2) Peripheral Blood (MM.1S) Spleen Blood (T-cell) Stomach
chr1 27165490 27165816 vista888 27216788 50972
VISTA
chr1 27172425 27178155 enh49691 27216788 38633
Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Epithelial (MCF-7)
chr1 27175784 27176273 vista889 27216788 40515
VISTA
chr1 27184739 27184972 vista890 27216788 31816
VISTA
chr1 27185457 27185720 vista891 27216788 31068
VISTA
chr1 27185755 27186143 vista892 27216788 30645
VISTA
chr1 27191386 27191927 vista893 27216788 24861
VISTA
chr1 27192234 27201210 enh168 27216788 15578
Skin (Keratinocyte) Prostate (PC-3) Esophagus Lung Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
chr1 27206205 27210355 enh92038 27216788 6433
Liver (HepG2)
chr1 27231968 27236534 enh49692 27216788 15180
Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Large Intestine Colon (HCT116) Lung (PC-9) Pancreas Epithelial (MCF-7)
chr1 27244420 27244792 vista894 27216788 27632
VISTA
chr1 27262605 27267375 enh92039 27216788 45817
Spleen Liver (HepG2)
chr1 27289282 27289295 vista895 27216788 72494
VISTA
chr1 27294965 27301275 enh61818 27216788 78177
Esophagus Liver (HepG2) Stomach
chr1 27301385 27305535 enh109300 27216788 84597
Stomach
Transcript facotrs that regulate GPN2[ENSG00000142751.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GPN2[ENSG00000142751.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 26327776 rs74577796 A G 874848 Esophagus 0.0335445 177628
chr1 27454068 rs796866582 CA C 237280 Esophagus 0.141771 184334
chr1 26319913 rs17163460 C A 882711 Heart 0.354175 177574
chr1 26914450 rs144798228 C T 288174 Pancreas 0.388715 181119
chr1 26746807 rs12728900 G A 455817 Spleen 0.44053 180293
chr1 27401699 rs11584086 A G 184911 Lung 0.0679485 184007
chr1 26503045 rs35775612 G A 699579 Stomach 0.248564 178832
chr1 26317761 rs147997330 C G 884863 Adrenal 0.173786 177544
Details of GPN2[ENSG00000142751.10]
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Genomic Location chr1:27202624-27216788[-]
TSS 27216788
Gene Name GPN2
Ensembl ID ENSG00000142751.10
ENTREZID 54707
Uniprot
Q9H9Y4
Protein Name
GPN-loop GTPase 2
Expression levels of GPN2[ENSG00000142751.10]
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