EnhancerDB
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  3. SYPL2[ENSG00000143028.7]
Enhancers that regulate SYPL2[ENSG00000143028.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 109910105 109937735 enh12125 110009180 71445
Prostate (PC-3) Liver (HepG2) Liver Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 109913179 109913623 vista2853 110009180 95557
VISTA
chr1 109928106 109928152 vista2854 110009180 81028
VISTA
chr1 109933790 109934137 vista2855 110009180 75043
VISTA
chr1 109937534 109937767 vista2856 110009180 71413
VISTA
chr1 109938897 109939079 vista2857 110009180 70101
VISTA
chr1 109979395 109983823 enh27061 110009180 25357
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Muscle (Myotube)
chr1 109981518 109981703 vista2858 110009180 27477
VISTA
chr1 110057545 110061855 enh49936 110009180 48365
Brain (SK-N-MC) Large Intestine
chr1 110070963 110077287 enh27062 110009180 61783
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Pancreas (Panc1) Muscle (Myotube) Thymus Heart
chr1 110096345 110100495 enh94038 110009180 87165
Spleen
chr1 110102365 110115715 enh551 110009180 93185
Skin (Keratinocyte) Prostate (PC-3) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript facotrs that regulate SYPL2[ENSG00000143028.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SYPL2[ENSG00000143028.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 110036998 rs17575205 G C 12239 Heart 7.67986e-13 546654
chr1 109912051 rs17646665 A G 97129 Heart 3.9073e-15 546219
chr1 110478860 rs6537886 G A 454101 Spleen 0.375198 549711
chr1 110007636 rs4246517 G C 1544 Ovary 6.9988e-20 546611
chr1 109904971 rs3879449 A T 104209 Uterus 6.19837e-05 546165
chr1 109912051 rs17646665 A G 97129 Thyroid 3.1451e-11 546219
chr1 109936682 rs6537757 G A 72498 Lung 1.04181e-25 546445
Details of SYPL2[ENSG00000143028.7]
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Genomic Location chr1:110009180-110024759[+]
TSS 110009180
Gene Name SYPL2
Ensembl ID ENSG00000143028.7
ENTREZID 284612
Uniprot
B4DYR7
Q5VXT5
Protein Name
SYPL2 protein
Synaptophysin-like protein 2
Expression levels of SYPL2[ENSG00000143028.7]
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