EnhancerDB
  1. Home
  2. Gene
  3. FGD2[ENSG00000146192.10]
Enhancers that regulate FGD2[ENSG00000146192.10]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 36869985 36884155 enh49089 36973422 89267
Bone Marrow (K562) Prostate (PC-3) Blood (T-cell) Esophagus Lung Stomach Adrenal Pancreas Uterus Thymus Heart
chr6 36890865 36909026 enh23197 36973422 64396
Cervix (HeLa-S3) Prostate (RWPE1) Bone (Osteoblast) Placenta Lung (PC-9)
chr6 36910665 36914815 enh89005 36973422 58607
Pancreas
chr6 36926425 36935175 enh110273 36973422 38247
Stomach
chr6 36938608 36942758 enh66201 36973422 30664
Heart
chr6 36963565 36968335 enh66202 36973422 5087
Ovary Thyroid Pancreas Heart Stomach
chr6 36975377 36975678 vista51772 36973422 1955
VISTA
chr6 36983906 36993535 enh9089 36973422 10484
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Lung Stomach Thyroid Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
chr6 36997320 36997527 vista51773 36973422 23898
VISTA
chr6 37001116 37001406 vista51774 36973422 27694
VISTA
chr6 37006588 37006757 vista51775 36973422 33166
VISTA
chr6 37012585 37032515 enh23198 36973422 39163
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 37016531 37017062 vista51776 36973422 43109
VISTA
chr6 37017119 37017495 vista51777 36973422 43697
VISTA
chr6 37017809 37018367 vista51778 36973422 44387
VISTA
chr6 37018897 37019476 vista51779 36973422 45475
VISTA
chr6 37019695 37020025 vista51780 36973422 46273
VISTA
chr6 37024161 37024556 vista51781 36973422 50739
VISTA
chr6 37025964 37026081 vista51782 36973422 52542
VISTA
chr6 37030245 37030479 vista51783 36973422 56823
VISTA
chr6 37037482 37048213 enh38957 36973422 64060
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr6 37048990 37055795 enh23199 36973422 75568
Bone Marrow (K562) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Uterus Heart
chr6 37051169 37051555 vista51784 36973422 77747
VISTA
chr6 37057385 37075268 enh23200 36973422 83963
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr6 37063832 37064083 vista51785 36973422 90410
VISTA
chr6 37067331 37067581 vista51786 36973422 93909
VISTA
chr6 37070053 37070857 vista51787 36973422 96631
VISTA
Transcript facotrs that regulate FGD2[ENSG00000146192.10]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 36975403 36975410 E2F1 TRANSFAC yes 36973422 1981 70355723
chr6 36975415 36975420 ETS2 TRANSFAC yes 36973422 1993 70355724
chr6 36975417 36975429 SRF JASPAR yes 36973422 1995 70355725
chr6 36975436 36975448 NHLH1 JASPAR yes 36973422 2014 70355726
chr6 36975437 36975447 TFAP4 JASPAR yes 36973422 2015 70355727
chr6 36975455 36975470 NR2C2 JASPAR yes 36973422 2033 70355728
chr6 36975458 36975462 LFA1 TRANSFAC yes 36973422 2036 70355729
chr6 36975460 36975474 SPIC JASPAR yes 36973422 2038 70355730
chr6 36975463 36975474 ETV2 JASPAR yes 36973422 2041 70355731
chr6 36975464 36975471 SPIB JASPAR yes 36973422 2042 70355732
chr6 36975467 36975481 STAT1 JASPAR yes 36973422 2045 70355733
chr6 36975467 36975482 STAT2 JASPAR yes 36973422 2045 70355734
chr6 36975474 36975495 REST JASPAR yes 36973422 2052 70355735
chr6 36975479 36975494 TFAP2A JASPAR yes 36973422 2057 70355736
chr6 36975479 36975494 TFAP2C JASPAR yes 36973422 2057 70355737
chr6 36975485 36975490 SP1 TRANSFAC yes 36973422 2063 70355738
chr6 36975498 36975504 HiNF-A TRANSFAC yes 36973422 2076 70355739
chr6 36975499 36975513 SPI1 JASPAR yes 36973422 2077 70355740
chr6 36975504 36975519 IRF9 JASPAR yes 36973422 2082 70355741
chr6 36975506 36975520 STAT1 JASPAR yes 36973422 2084 70355742
chr6 36975506 36975521 STAT2 JASPAR yes 36973422 2084 70355743
chr6 36975508 36975529 IRF1 JASPAR yes 36973422 2086 70355744
chr6 36975520 36975541 IRF1 JASPAR yes 36973422 2098 70355745
chr6 36975550 36975555 SP1 TRANSFAC yes 36973422 2128 70355746
chr6 36975571 36975581 SREBF1 JASPAR yes 36973422 2149 70355747
chr6 36975571 36975581 SREBF2 JASPAR yes 36973422 2149 70355748
chr6 36975592 36975607 RFX5 JASPAR yes 36973422 2170 70355749
chr6 36975594 36975608 PLAG1 JASPAR yes 36973422 2172 70355750
chr6 36975602 36975608 MAZ TRANSFAC yes 36973422 2180 70355751
chr6 36975607 36975618 E2F6 JASPAR yes 36973422 2185 70355752
chr6 36975608 36975613 SP1 TRANSFAC yes 36973422 2186 70355753
chr6 36975642 36975646 H4TF2 TRANSFAC yes 36973422 2220 70355754
chr6 36975646 36975650 H1TF2 TRANSFAC yes 36973422 2224 70355755
chr6 36975646 36975650 NFE TRANSFAC yes 36973422 2224 70355756
chr6 36975646 36975650 SRF TRANSFAC yes 36973422 2224 70355757
chr6 36975669 36975673 H1TF2 TRANSFAC yes 36973422 2247 70355758
chr6 36975669 36975673 NFE TRANSFAC yes 36973422 2247 70355759
chr6 36975669 36975673 SRF TRANSFAC yes 36973422 2247 70355760
SNPs associated with FGD2[ENSG00000146192.10], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 36988196 rs56016101 T A 0 Esophagus 3.67606e-13 8997757
chr6 37709865 rs76581942 C T 713019 Esophagus 0.115105 9003562
chr6 36580025 rs148506000 C T 393397 Heart 0.142674 8994408
chr6 36984718 rs1224488 G A,C 0 Pancreas 0.159444 8997716
chr6 36830360 rs76207768 G A 143062 Spleen 0.347923 8996554
chr6 36086275 rs56024538 CCACCTCCCTGG C 887147 Liver 0.465556 8991682
chr6 36975033 rs831512 T C 0 Lung 0.175729 8997686
Details of FGD2[ENSG00000146192.10]
Back to top
Genomic Location chr6:36973422-36996846[+]
TSS 36973422
Gene Name FGD2
Ensembl ID ENSG00000146192.10
ENTREZID 221472
Uniprot
Q7Z6J4
Protein Name
RhoGEF and PH domain-containing protein 2
FYVE
Expression levels of FGD2[ENSG00000146192.10]
Back to top