EnhancerDB
  1. Home
  2. Gene
  3. MSI2[ENSG00000153944.6]
Enhancers that regulate MSI2[ENSG00000153944.6]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 55233785 55238795 enh32240 55333212 94417
Astrocyte Muscle (Myotube) Cervix (HeLa-S3)
chr17 55240285 55246435 enh17239 55333212 86777
Prostate (PC-3) Placenta Neural Stem Cells (H9) Lung (PC-9)
chr17 55250145 55254295 enh104348 55333212 78917
Peripheral Blood (MM.1S)
chr17 55259745 55263895 enh104349 55333212 69317
Peripheral Blood (MM.1S)
chr17 55285385 55295002 enh32241 55333212 38210
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Epithelial (MCF-7)
chr17 55288386 55288469 vista25222 55333212 44743
VISTA
chr17 55292764 55293032 vista25223 55333212 40180
VISTA
chr17 55302245 55306395 enh94311 55333212 26817
Spleen
chr17 55310211 55314774 enh69300 55333212 18438
Neural Stem Cells (H9)
chr17 55317631 55322755 enh65055 55333212 10457
Spleen Cervix (HeLa-S3) Ovary Heart
chr17 55357405 55371735 enh17240 55333212 24193
Bone Marrow (K562) Brain (SK-N-SH) Lung Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
chr17 55381445 55396695 enh4483 55333212 48233
Large Intestine Esophagus Blood (OCI-LY7) Muscle (A673) Blood (Karpas-422) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 55400085 55412060 enh4484 55333212 66873
Large Intestine Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr17 55416945 55424575 enh75921 55333212 83733
Thyroid Muscle (A673) Liver (HepG2) Ovary
chr17 55425305 55429815 enh75922 55333212 92093
Muscle (A673) Stomach
chr17 55429945 55439655 enh4485 55333212 96733
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
chr17 55432914 55433044 vista25224 55333212 99702
VISTA
Transcript facotrs that regulate MSI2[ENSG00000153944.6]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with MSI2[ENSG00000153944.6], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 55427060 rs60009244 C T 0 Esophagus 0.0441448 4948763
chr17 55456558 rs74550090 C T 0 Esophagus 0.30848 4949118
chr17 54885087 rs4793832 G A 448125 Heart 0.328318 4945206
chr17 54826992 rs16957770 C T 506220 Breast 0.267935 4944764
chr17 55897641 rs2685512 G A 135595 Spleen 0.349873 4953452
chr17 55292948 rs72828973 G T 40264 Ovary 0.242618 4947671
chr17 54674269 rs183675440 C T 658943 Uterus 0.39066 4943655
chr17 55419687 rs792401 G A 0 Thyroid 0.000834617 4948693
chr17 55094844 rs4992883 C G 238368 Liver 0.47727 4946177
chr17 55604697 rs73312838 A C,G 0 Adrenal 0.254491 4950753
Details of MSI2[ENSG00000153944.6]
Back to top
Genomic Location chr17:55333212-55762046[+]
TSS 55333212
Gene Name MSI2
Ensembl ID ENSG00000153944.6
ENTREZID 124540
Uniprot
Q96DH6
B4DHE8
Protein Name
RNA-binding protein Musashi homolog 2
Expression levels of MSI2[ENSG00000153944.6]
Back to top