EnhancerDB
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Enhancers that regulate CCDC24[ENSG00000159214.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 44343872 44358722 enh11818 44457031 98309
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 44378405 44378587 vista1428 44457031 78444
VISTA
chr1 44380893 44381202 vista1429 44457031 75829
VISTA
chr1 44385605 44393795 enh26662 44457031 63236
Astrocyte Prostate (RWPE1)
chr1 44419838 44419961 vista1430 44457031 37070
VISTA
chr1 44428103 44428423 vista1431 44457031 28608
VISTA
chr1 44430681 44431060 vista1432 44457031 25971
VISTA
chr1 44452990 44453115 vista1433 44457031 3916
VISTA
chr1 44469265 44473779 enh61832 44457031 12234
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Pancreas Uterus Stomach
chr1 44483385 44487535 enh64034 44457031 26354
Heart
chr1 44489645 44495109 enh306 44457031 32614
Colon (HCT116) Blood (Karpas-422)
chr1 44495684 44496307 vista1434 44457031 38653
VISTA
chr1 44500383 44503337 vista42 44457031 43352
VISTA
chr1 44502605 44518075 enh11819 44457031 45574
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Stomach
chr1 44522945 44528795 enh49724 44457031 65914
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Uterus
chr1 44531225 44546035 enh307 44457031 74194
Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Bone (Osteoblast) Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube)
chr1 44549045 44561575 enh66909 44457031 92014
Bone Marrow (K562) Cervix (HeLa-S3) Neural Stem Cells (H9) Lung (PC-9)
Transcript facotrs that regulate CCDC24[ENSG00000159214.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 44452828 44453318 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 44457031 3713 107803046
chr1 44452991 44453004 SMAD2 JASPAR yes 44457031 4027 118283930
chr1 44452999 44453011 INSM1 JASPAR yes 44457031 4020 118283931
chr1 44453044 44453059 FOXA1 JASPAR yes 44457031 3972 118283932
chr1 44453045 44453060 FOXP1 JASPAR yes 44457031 3971 118283933
chr1 44453046 44453057 FOXP2 JASPAR yes 44457031 3974 118283934
chr1 44453046 44453058 FOXC2 JASPAR yes 44457031 3973 118283935
chr1 44453047 44453055 FOXD1 JASPAR yes 44457031 3976 118283936
chr1 44453047 44453055 FOXG1 JASPAR yes 44457031 3976 118283937
chr1 44453047 44453055 FOXO3 JASPAR yes 44457031 3976 118283938
chr1 44453047 44453058 FOXB1 JASPAR yes 44457031 3973 118283939
chr1 44453047 44453058 FOXC1 JASPAR yes 44457031 3973 118283940
chr1 44453048 44453055 FOXD2 JASPAR yes 44457031 3976 118283941
chr1 44453048 44453055 FOXI1 JASPAR yes 44457031 3976 118283942
chr1 44453048 44453055 FOXL1 JASPAR yes 44457031 3976 118283943
chr1 44453048 44453055 FOXO4 JASPAR yes 44457031 3976 118283944
chr1 44453048 44453055 FOXO6 JASPAR yes 44457031 3976 118283945
chr1 44453048 44453055 FOXP3 JASPAR yes 44457031 3976 118283946
chr1 44453048 44453056 FOXO3 JASPAR yes 44457031 3975 118283947
chr1 44453048 44453059 FOXA1 JASPAR yes 44457031 3972 118283948
chr1 44453054 44453058 YY1 TRANSFAC yes 44457031 3973 118283949
chr1 44453054 44453067 EOMES JASPAR yes 44457031 3964 118283950
chr1 44453056 44453066 TBR1 JASPAR yes 44457031 3965 118283951
chr1 44453063 44453077 PLAG1 JASPAR yes 44457031 3954 118283952
SNPs associated with CCDC24[ENSG00000159214.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 44496765 rs2486009 T C 34565 Esophagus 0.179181 276336
chr1 43694679 rs114989200 C A,G 762352 Heart 0.0705442 271710
chr1 45196720 rs9988437 G A 734520 Heart 0.117381 280999
chr1 43472313 rs1754140 G A 984718 Pancreas 0.225337 270283
chr1 43812879 rs114338202 G A 644152 Breast 0.360716 272476
chr1 44214545 rs397741786 T TA 242486 Spleen 0.263737 274693
chr1 45000893 rs272562 A G 538693 Liver 0.340409 279481
chr1 45272201 rs138630887 G A,C 810001 Lung 0.265849 281395
chr1 43601935 rs605510 C T 855096 Stomach 0.242912 271468
chr1 43834112 rs77175505 G A 622919 Adrenal 0.74633 272591
Details of CCDC24[ENSG00000159214.8]
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Genomic Location chr1:44457031-44462200[+]
TSS 44457031
Gene Name CCDC24
Ensembl ID ENSG00000159214.8
ENTREZID 149473
Uniprot
Q8N4L8
Protein Name
CCDC24 protein
Coiled-coil domain-containing protein 24
Expression levels of CCDC24[ENSG00000159214.8]
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