EnhancerDB
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Enhancers that regulate RAVER1[ENSG00000161847.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 10331225 10355975 enh5000 10444316 88341
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
chr19 10346765 10347120 vista28569 10444316 97196
VISTA
chr19 10349944 10350302 vista28570 10444316 94014
VISTA
chr19 10352370 10352740 vista28571 10444316 91576
VISTA
chr19 10385685 10392595 enh108715 10444316 51721
Lung (PC-9)
chr19 10408245 10412775 enh91209 10444316 31541
Bone Marrow (K562)
chr19 10442358 10442615 vista28572 10444316 1701
VISTA
chr19 10457281 10457542 vista28573 10444316 12965
VISTA
chr19 10482460 10486660 enh60746 10444316 38144
Blood (OCI-LY7)
chr19 10497565 10501795 enh91210 10444316 53249
Bone Marrow (K562) Spleen Uterus Blood (T-cell)
chr19 10513154 10513331 vista28574 10444316 68838
VISTA
chr19 10515339 10515636 vista28575 10444316 71023
VISTA
chr19 10515565 10521735 enh48167 10444316 71249
Blood (T-cell) Thymus Blood (OCI-LY7)
chr19 10516279 10516445 vista28576 10444316 71963
VISTA
chr19 10517647 10518072 vista28577 10444316 73331
VISTA
chr19 10519571 10519867 vista28578 10444316 75255
VISTA
chr19 10523082 10523284 vista28579 10444316 78766
VISTA
chr19 10526573 10526793 vista28580 10444316 82257
VISTA
chr19 10529596 10529758 vista28581 10444316 85280
VISTA
chr19 10532501 10532989 vista28582 10444316 88185
VISTA
chr19 10532745 10542455 enh87103 10444316 88429
Blood (GM12878) Thyroid Peripheral Blood (MM.1S) Blood (T-cell) Stomach
chr19 10534715 10535011 vista28583 10444316 90399
VISTA
chr19 10535896 10536533 vista28584 10444316 91580
VISTA
chr19 10538657 10539326 vista28585 10444316 94341
VISTA
Transcript facotrs that regulate RAVER1[ENSG00000161847.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 10442358 10442373 FOXP1 JASPAR yes 10444316 1943 70801530
chr19 10442359 10442374 FOXP1 JASPAR yes 10444316 1942 70801531
chr19 10442359 10442380 IRF1 JASPAR yes 10444316 1936 70801532
chr19 10442360 10442375 FOXP1 JASPAR yes 10444316 1941 70801533
chr19 10442360 10442381 IRF1 JASPAR yes 10444316 1935 70801534
chr19 10442361 10442376 FOXP1 JASPAR yes 10444316 1940 70801535
chr19 10442361 10442382 IRF1 JASPAR yes 10444316 1934 70801536
chr19 10442362 10442377 FOXP1 JASPAR yes 10444316 1939 70801537
chr19 10442362 10442383 IRF1 JASPAR yes 10444316 1933 70801538
chr19 10442363 10442378 FOXP1 JASPAR yes 10444316 1938 70801539
chr19 10442363 10442384 IRF1 JASPAR yes 10444316 1932 70801540
chr19 10442364 10442379 FOXP1 JASPAR yes 10444316 1937 70801541
chr19 10442364 10442385 IRF1 JASPAR yes 10444316 1931 70801542
chr19 10442365 10442380 FOXP1 JASPAR yes 10444316 1936 70801543
chr19 10442365 10442386 IRF1 JASPAR yes 10444316 1930 70801544
chr19 10442366 10442381 FOXP1 JASPAR yes 10444316 1935 70801545
chr19 10442366 10442387 IRF1 JASPAR yes 10444316 1929 70801546
chr19 10442367 10442382 FOXP1 JASPAR yes 10444316 1934 70801547
chr19 10442367 10442388 IRF1 JASPAR yes 10444316 1928 70801548
chr19 10442368 10442383 FOXP1 JASPAR yes 10444316 1933 70801549
chr19 10442368 10442389 IRF1 JASPAR yes 10444316 1927 70801550
chr19 10442369 10442384 FOXP1 JASPAR yes 10444316 1932 70801551
chr19 10442370 10442391 IRF1 JASPAR yes 10444316 1925 70801552
chr19 10442371 10442386 FOXP1 JASPAR yes 10444316 1930 70801553
chr19 10442388 10442400 TFAP2B JASPAR yes 10444316 1916 70801554
chr19 10442388 10442400 TFAP2C JASPAR yes 10444316 1916 70801555
chr19 10442396 10442401 ETS2 TRANSFAC yes 10444316 1915 70801556
chr19 10442401 10442411 BARHL2 JASPAR yes 10444316 1905 70801557
chr19 10442403 10442407 YY1 TRANSFAC yes 10444316 1909 70801558
chr19 10442407 10442410 MYB TRANSFAC yes 10444316 1906 70801559
chr19 10442440 10442448 FOXO3 JASPAR yes 10444316 1868 70801560
chr19 10442469 10442472 MYB TRANSFAC yes 10444316 1844 70801561
chr19 10442537 10442542 MYC TRANSFAC yes 10444316 1774 70801562
chr19 10442542 10442546 LFA1 TRANSFAC yes 10444316 1770 70801563
chr19 10442548 10443329 ZNF274 GTRD no Blood (GM12878) 10444316 987 108383147
chr19 10442572 10442577 TFAP2A TRANSFAC yes 10444316 1739 70801564
chr19 10442572 10442578 MZF1 JASPAR yes 10444316 1738 70801565
chr19 10442584 10442595 STAT1 JASPAR yes 10444316 1721 70801566
chr19 10442593 10442607 ZIC1 JASPAR yes 10444316 1709 70801567
chr19 10442593 10442608 ZIC4 JASPAR yes 10444316 1708 70801568
SNPs associated with RAVER1[ENSG00000161847.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 11082133 rs12981555 T C 637817 Heart 0.396452 5440338
chr19 10408581 rs148215750 G T 18307 Spleen 0.0878667 5435958
chr19 11192226 rs7249753 T C 747910 Ovary 0.335827 5440920
chr19 11059389 rs60185972 A G 615073 Thyroid 0.136569 5440068
chr19 10162187 rs183992782 G A 264701 Stomach 0.0258498 5434394
chr19 9896572 rs116792775 T C 530316 Adrenal 0.289251 5432680
Details of RAVER1[ENSG00000161847.9]
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Genomic Location chr19:10426888-10444316[-]
TSS 10444316
Gene Name RAVER1
Ensembl ID ENSG00000161847.9
ENTREZID 125950
Uniprot
Q8IY67
E9PAU2
Protein Name
Ribonucleoprotein PTB-binding 1
Expression levels of RAVER1[ENSG00000161847.9]
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