EnhancerDB
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Enhancers that regulate PDPN[ENSG00000162493.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 13812005 13816155 enh47140 13909960 93805
Thymus
chr1 13821717 13829175 enh47141 13909960 80785
Muscle (A673) Peripheral Blood (MM.1S) Thymus Blood (OCI-LY7)
chr1 13825180 13825414 vista423 13909960 84546
VISTA
chr1 13859925 13864075 enh63998 13909960 45885
Heart
chr1 13868002 13872829 enh47142 13909960 37131
Prostate (RWPE1) Lung Heart Thymus Stomach
chr1 13872857 13879475 enh42887 13909960 30485
Muscle (Myotube) Brain (SK-N-MC)
chr1 13880865 13885015 enh95833 13909960 24945
Epithelial (MCF-7)
chr1 13893605 13898035 enh111358 13909960 11925
Brain (SK-N-MC)
chr1 13913549 13922282 enh26536 13909960 3589
Prostate (RWPE1) Esophagus Astrocyte Uterus Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr1 13917058 13917313 vista424 13909960 7098
VISTA
chr1 13920056 13920639 vista425 13909960 10096
VISTA
chr1 13924305 13933435 enh26537 13909960 14345
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (Myotube) Heart
chr1 13931629 13932064 vista426 13909960 21669
VISTA
chr1 13941685 13957555 enh26538 13909960 31725
Astrocyte Prostate (PC-3) Uterus Stomach
chr1 13949833 13950153 vista427 13909960 39873
VISTA
chr1 13965601 13971644 enh42888 13909960 55641
Muscle (Myotube) Peripheral Blood (MM.1S) Blood (OCI-LY7)
chr1 13975725 13981015 enh78954 13909960 65765
Prostate (PC-3)
chr1 13986085 13996475 enh68 13909960 76125
Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Blood (Karpas-422) Spleen Uterus Thymus Stomach
chr1 14007045 14016214 enh69 13909960 97085
Blood (OCI-LY7) Prostate (RWPE1) Peripheral Blood (MM.1S) Blood (Karpas-422)
Transcript facotrs that regulate PDPN[ENSG00000162493.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 13913549 13913557 FOXL1 JASPAR yes 13909960 3589 26850958
chr1 13913549 13913564 FOXP1 JASPAR yes 13909960 3589 26850959
chr1 13913551 13913566 FOXP1 JASPAR yes 13909960 3591 26850960
chr1 13913553 13913557 TEAD2 TRANSFAC yes 13909960 3593 26850961
chr1 13913553 13913558 TBP TRANSFAC yes 13909960 3593 26850962
chr1 13913553 13913559 TFIID TRANSFAC yes 13909960 3593 26850963
chr1 13913553 13913564 FOXC1 JASPAR yes 13909960 3593 26850964
chr1 13913553 13913565 FOXC2 JASPAR yes 13909960 3593 26850965
chr1 13913554 13913565 FOXP2 JASPAR yes 13909960 3594 26850966
chr1 13913560 13913566 SOX10 JASPAR yes 13909960 3600 26850967
chr1 13913573 13913584 ESRRB JASPAR yes 13909960 3613 26850968
chr1 13913582 13913596 RXRG JASPAR yes 13909960 3622 26850969
chr1 13913584 13913599 HNF1A JASPAR yes 13909960 3624 26850970
chr1 13913585 13913598 HNF1B JASPAR yes 13909960 3625 26850971
chr1 13913586 13913598 HNF1B JASPAR yes 13909960 3626 26850972
chr1 13913589 13913601 MYBL1 JASPAR yes 13909960 3629 26850973
chr1 13913594 13913597 MYB TRANSFAC yes 13909960 3634 26850974
chr1 13913621 13913639 NR3C1 JASPAR yes 13909960 3661 26850975
chr1 13913650 13913655 ETS2 TRANSFAC yes 13909960 3690 26850976
chr1 13913658 13913662 YY1 TRANSFAC yes 13909960 3698 26850977
chr1 13913665 13913682 ZNF410 JASPAR yes 13909960 3705 26850978
chr1 13913667 13913677 MZF1 JASPAR yes 13909960 3707 26850979
chr1 13913668 13913674 MZF1 JASPAR yes 13909960 3708 26850980
chr1 13913686 13913701 SOX21 JASPAR yes 13909960 3726 26850981
chr1 13913686 13913702 SOX4 JASPAR yes 13909960 3726 26850982
chr1 13913705 13913720 MEF2C JASPAR yes 13909960 3745 26850983
chr1 13913707 13913711 YY1 TRANSFAC yes 13909960 3747 26850984
chr1 13913716 13913732 POU4F3 JASPAR yes 13909960 3756 26850985
chr1 13913717 13913733 POU4F3 JASPAR yes 13909960 3757 26850986
chr1 13913719 13913733 POU4F1 JASPAR yes 13909960 3759 26850987
chr1 13913747 13913767 TP53 JASPAR yes 13909960 3787 26850988
chr1 13913752 13913756 YY1 TRANSFAC yes 13909960 3792 26850989
chr1 13913752 13913765 ELF1 JASPAR yes 13909960 3792 26850990
chr1 13913753 13913761 FEV JASPAR yes 13909960 3793 26850991
chr1 13913789 13913807 NR3C1 JASPAR yes 13909960 3829 26850992
chr1 13913873 13913888 STAT2 JASPAR yes 13909960 3913 26850993
chr1 13913874 13913888 STAT1 JASPAR yes 13909960 3914 26850994
chr1 13913880 13913890 TEAD1 JASPAR yes 13909960 3920 26850995
chr1 13913880 13913890 TEAD4 JASPAR yes 13909960 3920 26850996
chr1 13913888 13913902 GATA2 JASPAR yes 13909960 3928 26850997
chr1 13913892 13913900 GATA3 JASPAR yes 13909960 3932 26850998
chr1 13913893 13913907 POU1F1 JASPAR yes 13909960 3933 26850999
chr1 13913903 13913907 YY1 TRANSFAC yes 13909960 3943 26851000
chr1 13913912 13913916 YY1 TRANSFAC yes 13909960 3952 26851001
chr1 13913945 13913949 TEAD2 TRANSFAC yes 13909960 3985 26851002
chr1 13913947 13913950 MYB TRANSFAC yes 13909960 3987 26851003
chr1 13913966 13913976 SP1 JASPAR yes 13909960 4006 26851004
chr1 13913966 13913987 ZNF263 JASPAR yes 13909960 4006 26851005
chr1 13913969 13913979 SP1 JASPAR yes 13909960 4009 26851006
chr1 13913969 13913990 ZNF263 JASPAR yes 13909960 4009 26851007
chr1 13913972 13913982 SP1 JASPAR yes 13909960 4012 26851008
chr1 13913972 13913993 ZNF263 JASPAR yes 13909960 4012 26851009
chr1 13913975 13913985 SP1 JASPAR yes 13909960 4015 26851010
chr1 13913975 13913996 ZNF263 JASPAR yes 13909960 4015 26851011
chr1 13913979 13913986 CEBPA TRANSFAC yes 13909960 4019 26851012
chr1 13913980 13913991 E2F6 JASPAR yes 13909960 4020 26851013
chr1 13914026 13914030 YY1 TRANSFAC yes 13909960 4066 26851014
chr1 13914039 13914045 JUN TRANSFAC yes 13909960 4079 26851015
chr1 13914055 13914065 REL JASPAR yes 13909960 4095 26851016
chr1 13914055 13914066 NFKB1 JASPAR yes 13909960 4095 26851017
chr1 13914058 13914073 STAT1 JASPAR yes 13909960 4098 26851018
chr1 13914059 13914066 NFATC2 JASPAR yes 13909960 4099 26851019
chr1 13914060 13914071 STAT1 JASPAR yes 13909960 4100 26851020
chr1 13914060 13914071 STAT3 JASPAR yes 13909960 4100 26851021
chr1 13914063 13914070 ETS1 TRANSFAC yes 13909960 4103 26851022
chr1 13914103 13914108 ETS2 TRANSFAC yes 13909960 4143 26851023
chr1 13914123 13914133 HOXB13 JASPAR yes 13909960 4163 26851024
chr1 13914123 13914133 HOXD13 JASPAR yes 13909960 4163 26851025
chr1 13914128 13914133 MYB TRANSFAC yes 13909960 4168 26851026
chr1 13914153 13914168 HSF1 JASPAR yes 13909960 4193 26851027
chr1 13914198 13914214 NFYA JASPAR yes 13909960 4238 26851028
chr1 13914203 13914207 YY1 TRANSFAC yes 13909960 4243 26851029
chr1 13914211 13914215 LFA1 TRANSFAC yes 13909960 4251 26851030
chr1 13914230 13914241 NFE2L2 JASPAR yes 13909960 4270 26851031
chr1 13914239 13914243 YY1 TRANSFAC yes 13909960 4279 26851032
chr1 13914241 13914249 GATA3 JASPAR yes 13909960 4281 26851033
chr1 13914279 13914282 MYB TRANSFAC yes 13909960 4319 26851034
chr1 13914282 13914296 TLX1 JASPAR yes 13909960 4322 26851035
chr1 13914283 13914297 TLX1 JASPAR yes 13909960 4323 26851036
chr1 13914291 13914297 NFIC JASPAR yes 13909960 4331 26851037
chr1 13914293 13914297 H1TF2 TRANSFAC yes 13909960 4333 26851038
chr1 13914293 13914297 NFE TRANSFAC yes 13909960 4333 26851039
chr1 13914293 13914297 SRF TRANSFAC yes 13909960 4333 26851040
chr1 13914307 13914322 FOXP1 JASPAR yes 13909960 4347 26851041
chr1 13914310 13914321 FOXP2 JASPAR yes 13909960 4350 26851042
chr1 13914311 13914319 FOXO3 JASPAR yes 13909960 4351 26851043
chr1 13914315 13914330 SOX21 JASPAR yes 13909960 4355 26851044
chr1 13914315 13914331 SOX4 JASPAR yes 13909960 4355 26851045
chr1 13914329 13914334 ETS2 TRANSFAC yes 13909960 4369 26851046
chr1 13914345 13914348 MYB TRANSFAC yes 13909960 4385 26851047
chr1 13914345 13914357 INSM1 JASPAR yes 13909960 4385 26851048
chr1 13914345 13914359 NR2F1 JASPAR yes 13909960 4385 26851049
chr1 13914349 13914357 SP1 TRANSFAC yes 13909960 4389 26851050
chr1 13914353 13914374 REST JASPAR yes 13909960 4393 26851051
chr1 13914357 13914361 NFE TRANSFAC yes 13909960 4397 26851052
chr1 13914372 13914378 NFIC JASPAR yes 13909960 4412 26851053
chr1 13914372 13914386 TLX1 JASPAR yes 13909960 4412 26851054
chr1 13914373 13914387 TLX1 JASPAR yes 13909960 4413 26851055
chr1 13914389 13914395 YY1 JASPAR yes 13909960 4429 26851056
chr1 13914390 13914410 ESR1 JASPAR yes 13909960 4430 26851057
chr1 13914415 13914429 SPIC JASPAR yes 13909960 4455 26851058
chr1 13914493 13914507 TCF7L2 JASPAR yes 13909960 4533 26851059
chr1 13914504 13914510 JUN TRANSFAC yes 13909960 4544 26851060
chr1 13914517 13914529 INSM1 JASPAR yes 13909960 4557 26851061
chr1 13914524 13914529 ETS2 TRANSFAC yes 13909960 4564 26851062
chr1 13914534 13914543 ZEB1 JASPAR yes 13909960 4574 26851063
chr1 13914573 13914585 PKNOX1 JASPAR yes 13909960 4613 26851064
chr1 13914573 13914585 TGIF1 JASPAR yes 13909960 4613 26851065
chr1 13914573 13914585 TGIF2 JASPAR yes 13909960 4613 26851066
chr1 13914584 13914597 JUN JASPAR yes 13909960 4624 26851067
chr1 13914612 13914619 SP1 TRANSFAC yes 13909960 4652 26851068
chr1 13914613 13914618 SP1 TRANSFAC yes 13909960 4653 26851069
chr1 13914613 13914619 SP1 TRANSFAC yes 13909960 4653 26851070
chr1 13914613 13914620 SP1 TRANSFAC yes 13909960 4653 26851071
chr1 13914613 13914625 ZBTB7B JASPAR yes 13909960 4653 26851072
chr1 13914615 13914625 ZNF740 JASPAR yes 13909960 4655 26851073
chr1 13914616 13914626 ZNF740 JASPAR yes 13909960 4656 26851074
chr1 13914616 13914636 RREB1 JASPAR yes 13909960 4656 26851075
chr1 13914617 13914631 PLAG1 JASPAR yes 13909960 4657 26851076
chr1 13914618 13914638 RREB1 JASPAR yes 13909960 4658 26851077
chr1 13914620 13914640 RREB1 JASPAR yes 13909960 4660 26851078
chr1 13914623 13914629 HiNF-A TRANSFAC yes 13909960 4663 26851079
chr1 13914648 13914659 EBF1 JASPAR yes 13909960 4688 26851080
chr1 13914671 13914684 NR2F1 JASPAR yes 13909960 4711 26851081
chr1 13914695 13914710 RUNX2 JASPAR yes 13909960 4735 26851082
chr1 13914701 13914707 SOX10 JASPAR yes 13909960 4741 26851083
chr1 13914707 13914718 TFAP2A JASPAR yes 13909960 4747 26851084
chr1 13914707 13914718 TFAP2B JASPAR yes 13909960 4747 26851085
chr1 13914707 13914718 TFAP2C JASPAR yes 13909960 4747 26851086
chr1 13914711 13914730 PAX5 JASPAR yes 13909960 4751 26851087
chr1 13914747 13914756 SRY JASPAR yes 13909960 4787 26851088
chr1 13914749 13914752 MYB TRANSFAC yes 13909960 4789 26851089
chr1 13914750 13914766 SOX8 JASPAR yes 13909960 4790 26851090
chr1 13914758 13914767 SOX9 JASPAR yes 13909960 4798 26851091
chr1 13914760 13914769 SRY JASPAR yes 13909960 4800 26851092
chr1 13914800 13914814 PLAG1 JASPAR yes 13909960 4840 26851093
chr1 13914810 13914815 ETS2 TRANSFAC yes 13909960 4850 26851094
chr1 13914815 13914826 FLI1 JASPAR yes 13909960 4855 26851095
chr1 13914824 13914828 LFA1 TRANSFAC yes 13909960 4864 26851096
chr1 13914829 13914842 HSF1 JASPAR yes 13909960 4869 26851097
chr1 13914829 13914842 HSF2 JASPAR yes 13909960 4869 26851098
chr1 13914833 13914848 MEF2A JASPAR yes 13909960 4873 26851099
chr1 13914835 13914847 MEF2A JASPAR yes 13909960 4875 26851100
chr1 13914836 13914846 MEF2A JASPAR yes 13909960 4876 26851101
chr1 13914837 13914841 YY1 TRANSFAC yes 13909960 4877 26851102
chr1 13914838 13914852 POU1F1 JASPAR yes 13909960 4878 26851103
chr1 13914839 13914851 POU3F1 JASPAR yes 13909960 4879 26851104
chr1 13914839 13914852 POU3F3 JASPAR yes 13909960 4879 26851105
chr1 13914840 13914852 POU2F1 JASPAR yes 13909960 4880 26851106
chr1 13914843 13914846 MYB TRANSFAC yes 13909960 4883 26851107
chr1 13914850 13914860 CUX1 JASPAR yes 13909960 4890 26851108
chr1 13914850 13914860 CUX2 JASPAR yes 13909960 4890 26851109
chr1 13914865 13914869 LFA1 TRANSFAC yes 13909960 4905 26851110
chr1 13914868 13914883 STAT1 JASPAR yes 13909960 4908 26851111
chr1 13914868 13914885 ZNF410 JASPAR yes 13909960 4908 26851112
chr1 13914871 13914887 ZNF143 JASPAR yes 13909960 4911 26851113
chr1 13914920 13914924 YY1 TRANSFAC yes 13909960 4960 26851114
chr1 13914933 13914944 NFE2L2 JASPAR yes 13909960 4973 26851115
chr1 13914953 13914959 NFE2 TRANSFAC yes 13909960 4993 26851116
SNPs associated with PDPN[ENSG00000162493.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 13947024 rs59835073 C T 2572 Esophagus 4.45511e-11 89639
chr1 13946586 rs6703700 G A 2134 Esophagus 2.93916e-07 89626
chr1 13946586 rs6703700 G A 2134 Esophagus 5.49421e-08 89626
chr1 14136289 rs114577181 T A 191837 Heart 0.232238 91200
chr1 14007451 rs2487650 C A 62999 Heart 0.248607 90274
chr1 13946586 rs6703700 G A 2134 Breast 1.21348e-05 89626
chr1 13942731 rs11880 T C 0 Ovary 0.143414 89547
chr1 13994607 rs12076838 C T 50155 Uterus 0.187202 90231
chr1 13897058 rs7553203 C A,T 12902 Lung 0.0163078 89273
chr1 13943897 rs12408407 T G 0 Stomach 0.00501681 89574
chr1 13943897 rs12408407 T G 0 Adrenal 0.0308523 89574
Details of PDPN[ENSG00000162493.12]
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Genomic Location chr1:13909960-13944452[+]
TSS 13909960
Gene Name PDPN
Ensembl ID ENSG00000162493.12
ENTREZID 10630
Uniprot
Q86YL7
Protein Name
Podoplanin
Expression levels of PDPN[ENSG00000162493.12]
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