EnhancerDB
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Enhancers that regulate DNASE1L3[ENSG00000163687.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 58095425 58104175 enh48700 58200424 96249
Peripheral Blood (MM.1S) Thymus Blood (T-cell)
chr3 58145585 58153275 enh65673 58200424 47149
Stomach Liver (HepG2) Heart
chr3 58156825 58169208 enh35428 58200424 31216
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Heart
chr3 58159699 58160034 vista41111 58200424 40390
VISTA
chr3 58162589 58162663 vista41112 58200424 37761
VISTA
chr3 58163548 58163776 vista41113 58200424 36648
VISTA
chr3 58164078 58164222 vista41114 58200424 36202
VISTA
chr3 58168035 58168365 vista41115 58200424 32059
VISTA
chr3 58171170 58177355 enh63147 58200424 23069
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Spleen Uterus Heart
chr3 58192298 58192649 vista41116 58200424 7775
VISTA
chr3 58202964 58203031 vista41117 58200424 2540
VISTA
chr3 58204245 58210250 enh59182 58200424 3821
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9)
chr3 58213885 58218035 enh76936 58200424 13461
Muscle (A673)
chr3 58218436 58218533 vista41118 58200424 18012
VISTA
chr3 58224845 58230375 enh54142 58200424 24421
Prostate (PC-3) Large Intestine Esophagus Stomach Peripheral Blood (MM.1S) Heart
chr3 58230485 58242115 enh54143 58200424 30061
Prostate (PC-3) Uterus Large Intestine
chr3 58244605 58248755 enh35429 58200424 44181
Astrocyte
chr3 58246699 58246763 vista41119 58200424 46275
VISTA
chr3 58255889 58260227 enh45418 58200424 55465
Muscle (Myotube)
chr3 58271718 58276248 enh45419 58200424 71294
Muscle (Myotube)
Transcript facotrs that regulate DNASE1L3[ENSG00000163687.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 58202875 58203517 TCF7L2 UCSC Txn Factor no Conserved 58200424 2451 108529394
chr3 58202884 58203200 EBF1 UCSC Txn Factor no Conserved 58200424 2460 108529395
chr3 58202892 58203576 CTCF UCSC Txn Factor no Conserved 58200424 2468 108529396
chr3 58202944 58203229 SMC3 UCSC Txn Factor no Conserved 58200424 2520 108529397
chr3 58202951 58203216 RAD21 UCSC Txn Factor no Conserved 58200424 2527 108529398
chr3 58202964 58202967 MYB TRANSFAC yes 58200424 2540 70991050
chr3 58202964 58202981 RXRA JASPAR yes 58200424 2540 70991051
chr3 58202979 58202990 ESRRA JASPAR yes 58200424 2555 70991052
chr3 58202986 58202996 TEAD1 JASPAR yes 58200424 2562 70991053
chr3 58202986 58202996 TEAD4 JASPAR yes 58200424 2562 70991054
chr3 58202989 58203001 POU3F2 JASPAR yes 58200424 2565 70991055
chr3 58202990 58203003 POU3F3 JASPAR yes 58200424 2566 70991056
chr3 58203005 58203020 RUNX2 JASPAR yes 58200424 2581 70991057
chr3 58203006 58203015 RUNX2 JASPAR yes 58200424 2582 70991058
chr3 58203017 58203026 HIC2 JASPAR yes 58200424 2593 70991059
chr3 58203020 58203024 LFA1 TRANSFAC yes 58200424 2596 70991060
SNPs associated with DNASE1L3[ENSG00000163687.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 58177386 rs7626509 T C 598 Esophagus 0.000795528 6761091
chr3 58177386 rs7626509 T C 598 Esophagus 0.0680858 6761091
chr3 58206298 rs79964829 A T 5874 Esophagus 0.00401573 6761183
chr3 58604413 rs35212018 T A,G 403989 Heart 0.293192 6763798
chr3 58177386 rs7626509 T C 598 Breast 3.57599e-05 6761091
chr3 58208188 rs9844002 A C,G 7764 Lung 0.0366167 6761207
chr3 58168473 rs7615055 T C 9511 Stomach 0.0170449 6761002
Details of DNASE1L3[ENSG00000163687.9]
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Genomic Location chr3:58177984-58200424[-]
TSS 58200424
Gene Name DNASE1L3
Ensembl ID ENSG00000163687.9
ENTREZID 1776
Uniprot
A0A024R365
Q13609
Protein Name
Deoxyribonuclease
Deoxyribonuclease gamma
Expression levels of DNASE1L3[ENSG00000163687.9]
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