EnhancerDB
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Enhancers that regulate KRT20[ENSG00000171431.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 38957965 38969075 enh32190 39041479 72404
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Lung (PC-9) Epithelial (MCF-7)
chr17 38995625 38999775 enh112500 39041479 41704
Brain (SK-N-MC)
chr17 39001145 39015955 enh17144 39041479 25524
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 39003172 39003257 vista24757 39041479 38222
VISTA
chr17 39010500 39010808 vista24758 39041479 30671
VISTA
chr17 39012522 39012675 vista24759 39041479 28804
VISTA
chr17 39055145 39077753 enh17145 39041479 13666
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 39066622 39066986 vista24760 39041479 25143
VISTA
chr17 39069125 39069341 vista24761 39041479 27646
VISTA
chr17 39086965 39091115 enh32191 39041479 45486
Astrocyte
chr17 39088847 39089143 vista24762 39041479 47368
VISTA
chr17 39091937 39092186 vista24763 39041479 50458
VISTA
chr17 39099743 39114455 enh17146 39041479 58264
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Ovary Esophagus Placenta Colon (HCT116) Lung (PC-9)
chr17 39108843 39109211 vista24764 39041479 67364
VISTA
chr17 39110175 39110404 vista24765 39041479 68696
VISTA
chr17 39113005 39113367 vista24766 39041479 71526
VISTA
Transcript facotrs that regulate KRT20[ENSG00000171431.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with KRT20[ENSG00000171431.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 39943093 rs34314307 G T 901614 Esophagus 0.106685 4875288
chr17 39866295 rs9908890 A G 824816 Pancreas 0.364676 4874933
chr17 39937376 rs9913846 C T 895897 Ovary 0.175445 4875213
chr17 38646147 rs1901187 T C 386046 Uterus 0.460756 4867439
Details of KRT20[ENSG00000171431.3]
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Genomic Location chr17:39032193-39041479[-]
TSS 39041479
Gene Name KRT20
Ensembl ID ENSG00000171431.3
ENTREZID 54474
Uniprot
P35900
Protein Name
type I cytoskeletal 20
Keratin
Expression levels of KRT20[ENSG00000171431.3]
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