EnhancerDB
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Enhancers that regulate NHLH1[ENSG00000171786.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 160242090 160242278 vista3578 160336857 94579
VISTA
chr1 160316870 160317108 vista3579 160336857 19749
VISTA
chr1 160332348 160332525 vista3580 160336857 4332
VISTA
chr1 160341585 160349639 enh675 160336857 4728
Bone Marrow (K562) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Blood (Karpas-422) Pancreas Heart
chr1 160344568 160344717 vista3581 160336857 7711
VISTA
chr1 160345693 160345986 vista3582 160336857 8836
VISTA
chr1 160371929 160383735 enh27155 160336857 35072
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Thymus Stomach
chr1 160376163 160376541 vista3583 160336857 39306
VISTA
chr1 160377718 160378261 vista3584 160336857 40861
VISTA
chr1 160379189 160379307 vista3585 160336857 42332
VISTA
chr1 160396184 160404675 enh676 160336857 59327
Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (T-cell) Blood (Karpas-422)
chr1 160399608 160399975 vista3586 160336857 62751
VISTA
chr1 160402251 160402521 vista3587 160336857 65394
VISTA
chr1 160405290 160409955 enh677 160336857 68433
Blood (OCI-LY7) Large Intestine Thymus Blood (Karpas-422)
chr1 160407857 160407975 vista3588 160336857 71000
VISTA
chr1 160419005 160427195 enh49998 160336857 82148
Epithelial (MCF-7) Large Intestine Blood (GM12878) Blood (T-cell) Stomach
chr1 160420742 160421140 vista3589 160336857 83885
VISTA
chr1 160428005 160432715 enh678 160336857 91148
Blood (OCI-LY7) Blood (T-cell) Blood (Karpas-422)
chr1 160434829 160446658 enh679 160336857 97972
Blood (OCI-LY7) Blood (T-cell) Blood (Karpas-422) Blood (GM12878)
Transcript facotrs that regulate NHLH1[ENSG00000171786.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 160332145 160332581 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 160336857 4276 107839300
chr1 160332204 160332480 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 160336857 4377 107839301
chr1 160332206 160332622 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 160336857 4235 107839302
chr1 160332335 160332479 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 160336857 4378 107839303
chr1 160332363 160332378 TFAP2A JASPAR yes 160336857 4479 118383473
chr1 160332363 160332378 TFAP2C JASPAR yes 160336857 4479 118383474
chr1 160332365 160332380 TFAP2C JASPAR yes 160336857 4477 118383475
chr1 160332366 160332377 TFAP2A JASPAR yes 160336857 4480 118383476
chr1 160332366 160332377 TFAP2B JASPAR yes 160336857 4480 118383477
chr1 160332366 160332377 TFAP2C JASPAR yes 160336857 4480 118383478
chr1 160332366 160332378 TFAP2A JASPAR yes 160336857 4479 118383479
chr1 160332366 160332378 TFAP2B JASPAR yes 160336857 4479 118383480
chr1 160332366 160332378 TFAP2C JASPAR yes 160336857 4479 118383481
chr1 160332372 160332387 HNF4G JASPAR yes 160336857 4470 118383482
chr1 160332372 160332387 NR2C2 JASPAR yes 160336857 4470 118383483
chr1 160332380 160332399 PAX5 JASPAR yes 160336857 4458 118383484
chr1 160332386 160332391 SP1 TRANSFAC yes 160336857 4466 118383485
chr1 160332387 160332392 SP1 TRANSFAC yes 160336857 4465 118383486
chr1 160332407 160332933 ZNF274 GTRD no Liver (HepG2) 160336857 3924 107839304
chr1 160332415 160333010 ZNF274 GTRD no Bone Marrow (K562) 160336857 3847 107839305
chr1 160332417 160332966 ZNF274 GTRD no Liver (HepG2) 160336857 3891 107839306
chr1 160332436 160332962 ZNF274 GTRD no Liver (HepG2) 160336857 3895 107839307
chr1 160332444 160332450 SOX10 JASPAR yes 160336857 4407 118383487
chr1 160332452 160332467 TFAP2A JASPAR yes 160336857 4390 118383488
chr1 160332452 160332467 TFAP2C JASPAR yes 160336857 4390 118383489
chr1 160332455 160332470 STAT1 JASPAR yes 160336857 4387 118383490
chr1 160332457 160332468 STAT1 JASPAR yes 160336857 4389 118383491
chr1 160332457 160332468 STAT3 JASPAR yes 160336857 4389 118383492
chr1 160332462 160332467 ETS2 TRANSFAC yes 160336857 4390 118383493
chr1 160332463 160332484 ZNF263 JASPAR yes 160336857 4373 118383494
chr1 160332471 160332492 ZNF263 JASPAR yes 160336857 4365 118383495
chr1 160332473 160332485 INSM1 JASPAR yes 160336857 4372 118383496
chr1 160332474 160332484 MZF1 JASPAR yes 160336857 4373 118383497
chr1 160332474 160332495 ZNF263 JASPAR yes 160336857 4362 118383498
chr1 160332475 160332496 ZNF263 JASPAR yes 160336857 4361 118383499
chr1 160332478 160332488 SP1 JASPAR yes 160336857 4369 118383500
chr1 160332478 160332499 ZNF263 JASPAR yes 160336857 4358 118383501
chr1 160332480 160332486 MAZ TRANSFAC yes 160336857 4371 118383502
chr1 160332480 160332491 E2F6 JASPAR yes 160336857 4366 118383503
chr1 160332482 160332503 ZNF263 JASPAR yes 160336857 4354 118383504
chr1 160332484 160332489 ETS2 TRANSFAC yes 160336857 4368 118383505
chr1 160332485 160332506 ZNF263 JASPAR yes 160336857 4351 118383506
chr1 160332493 160332514 ZNF263 JASPAR yes 160336857 4343 118383507
chr1 160332495 160332515 RREB1 JASPAR yes 160336857 4342 118383508
chr1 160332497 160332507 ZNF740 JASPAR yes 160336857 4350 118383509
chr1 160332498 160332508 ZNF740 JASPAR yes 160336857 4349 118383510
chr1 160332501 160332515 PLAG1 JASPAR yes 160336857 4342 118383511
chr1 160332502 160332516 PLAG1 JASPAR yes 160336857 4341 118383512
chr1 160332502 160332517 NR2C2 JASPAR yes 160336857 4340 118383513
chr1 160332507 160332517 MZF1 JASPAR yes 160336857 4340 118383514
chr1 160332511 160332522 NFKB1 JASPAR yes 160336857 4335 118383515
chr1 160340345 160342061 ZNF274 GTRD no Bone Marrow (K562) 160336857 3488 21344428
chr1 160341674 160344550 ZNF274 GTRD no Bone Marrow (K562) 160336857 4817 21344429
chr1 160341796 160345079 ZNF274 GTRD no Bone Marrow (K562) 160336857 4939 21344430
chr1 160341796 160345079 ZNF274 GTRD no Bone Marrow (K562) 160336857 4939 107839308
SNPs associated with NHLH1[ENSG00000171786.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 160140998 rs1209804 G A 195859 Esophagus 0.330568 664198
chr1 160473695 rs6700654 A G 131057 Heart 0.178213 665637
chr1 160941118 rs115901521 G A 598480 Breast 0.386395 669474
chr1 159817278 rs2501348 A T 519579 Uterus 0.41257 662175
chr1 159550605 rs12745083 C T 786252 Thyroid 0.165877 661491
chr1 160317021 rs6668576 C A,T 19836 Liver 0.29181 664606
chr1 161320678 rs56295395 C T 978040 Lung 0.183255 671231
Details of NHLH1[ENSG00000171786.5]
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Genomic Location chr1:160336857-160342638[+]
TSS 160336857
Gene Name NHLH1
Ensembl ID ENSG00000171786.5
ENTREZID 4807
Uniprot
Q5T203
Q02575
Protein Name
Helix-loop-helix protein 1
Nescient helix loop helix 1
Expression levels of NHLH1[ENSG00000171786.5]
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