EnhancerDB
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Enhancers that regulate CHMP6[ENSG00000176108.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 78870769 78877695 enh4641 78965398 87703
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas Blood (Karpas-422) Breast Epithelial (MCF-7)
chr17 78881985 78890295 enh4642 78965398 75103
Peripheral Blood (MM.1S) Blood (Karpas-422)
chr17 78890952 78896515 enh32375 78965398 68883
Astrocyte Muscle (Myoblast) Muscle (Myotube) Uterus Stomach
chr17 78899725 78908055 enh32376 78965398 57343
Muscle (Myoblast) Astrocyte Muscle (Myotube)
chr17 78900870 78900990 vista26363 78965398 64408
VISTA
chr17 78901796 78901941 vista26364 78965398 63457
VISTA
chr17 78909985 78914135 enh48078 78965398 51263
Thymus
chr17 78914225 78918815 enh99457 78965398 46583
Uterus
chr17 78940336 78947620 enh62657 78965398 17778
Prostate (RWPE1) Esophagus Muscle (A673) Muscle (Myoblast) Pancreas Uterus Stomach
chr17 78950836 78960204 enh32377 78965398 5194
Astrocyte Muscle (Myotube) Bone (Osteoblast)
chr17 78958668 78958859 vista26365 78965398 6539
VISTA
chr17 78962835 78962976 vista26366 78965398 2422
VISTA
chr17 78978625 78988515 enh17431 78965398 13227
Placenta
chr17 78989925 79003875 enh17432 78965398 24527
Prostate (RWPE1) Blood (T-cell) Esophagus Lung Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myotube) Uterus Thymus Heart
chr17 78992000 78992331 vista26367 78965398 26602
VISTA
chr17 79008825 79027145 enh17433 78965398 43427
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
chr17 79011145 79011369 vista26368 78965398 45747
VISTA
chr17 79011561 79011905 vista26369 78965398 46163
VISTA
chr17 79017666 79018027 vista26370 78965398 52268
VISTA
chr17 79018501 79018654 vista26371 78965398 53103
VISTA
chr17 79024187 79024380 vista26372 78965398 58789
VISTA
chr17 79028945 79037155 enh96773 78965398 63547
Epithelial (MCF-7)
chr17 79036667 79036941 vista26373 78965398 71269
VISTA
chr17 79038005 79048395 enh17434 78965398 72607
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Stomach
chr17 79046413 79046604 vista26374 78965398 81015
VISTA
chr17 79051965 79056115 enh75945 78965398 86567
Muscle (A673)
chr17 79052498 79052591 vista26375 78965398 87100
VISTA
chr17 79055149 79055334 vista26376 78965398 89751
VISTA
chr17 79056542 79056873 vista26377 78965398 91144
VISTA
chr17 79058967 79071355 enh17435 78965398 93569
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 79064673 79065032 vista26378 78965398 99275
VISTA
Transcript facotrs that regulate CHMP6[ENSG00000176108.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 78958196 78960461 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 4937 108308070
chr17 78960615 78963254 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2144 108308134
chr17 78960939 78963030 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2368 108308135
chr17 78961511 78963060 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2338 108308136
chr17 78961550 78964193 TCF7L2 GTRD no Colon (HCT116) 78965398 1205 108308137
chr17 78961574 78963089 ZNF274 GTRD no Liver (HepG2) 78965398 2309 108308138
chr17 78961612 78963294 ZNF274 GTRD no Liver (HepG2) 78965398 2104 108308139
chr17 78961619 78963052 ZNF274 GTRD no Liver (HepG2) 78965398 2346 108308140
chr17 78961644 78963697 TCF7L2 GTRD no Colon (HCT116) 78965398 1701 108308141
chr17 78961796 78962870 TCF7L2 GTRD no Colon (HCT116) 78965398 2528 108308142
chr17 78961814 78963756 TCF7L2 GTRD no Colon (HCT116) 78965398 1642 108308143
chr17 78961878 78963796 TCF7L2 GTRD no Colon (HCT116) 78965398 1602 108308144
chr17 78961945 78962940 ZBTB33 GTRD no Lung (A549) 78965398 2458 108308145
chr17 78961967 78963899 ZNF274 GTRD no Liver (HepG2) 78965398 1499 108308146
chr17 78961996 78963888 ZNF274 GTRD no Liver (HepG2) 78965398 1510 108308147
chr17 78962020 78963074 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2324 108308148
chr17 78962030 78963310 TCF7L2 GTRD no Colon (HCT116) 78965398 2088 108308149
chr17 78962032 78963117 ZNF274 GTRD no Liver (HepG2) 78965398 2281 108308150
chr17 78962038 78963123 ZNF274 GTRD no Liver (HepG2) 78965398 2275 108308151
chr17 78962045 78963228 TCF7L2 GTRD no Colon (HCT116) 78965398 2170 108308152
chr17 78962056 78962892 TCF7L2 GTRD no Colon (HCT116) 78965398 2506 108308153
chr17 78962064 78963011 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2387 108308154
chr17 78962066 78963297 ZNF274 GTRD no Liver (HepG2) 78965398 2101 108308155
chr17 78962068 78963073 ZNF274 GTRD no Liver (HepG2) 78965398 2325 108308156
chr17 78962072 78963056 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2342 108308157
chr17 78962073 78963217 ZNF274 GTRD no Liver (HepG2) 78965398 2181 108308158
chr17 78962075 78963092 ZNF274 GTRD no Liver (HepG2) 78965398 2306 108308159
chr17 78962077 78963156 ZNF274 GTRD no Liver (HepG2) 78965398 2242 108308160
chr17 78962089 78962950 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2448 108308161
chr17 78962098 78962893 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2505 108308162
chr17 78962109 78963062 ZNF274 GTRD no Liver (HepG2) 78965398 2336 108308163
chr17 78962109 78963136 ZNF274 GTRD no Liver (HepG2) 78965398 2262 108308164
chr17 78962110 78962946 ZNF274 GTRD no Liver (HepG2) 78965398 2452 108308165
chr17 78962112 78963033 ZNF274 GTRD no Liver (HepG2) 78965398 2365 108308166
chr17 78962113 78962944 ZNF274 GTRD no Liver (HepG2) 78965398 2454 108308167
chr17 78962118 78962993 ZNF274 GTRD no Liver (HepG2) 78965398 2405 108308168
chr17 78962120 78963152 ZNF274 GTRD no Liver (HepG2) 78965398 2246 108308169
chr17 78962125 78963146 ZNF274 GTRD no Liver (HepG2) 78965398 2252 108308170
chr17 78962128 78963151 ZNF274 GTRD no Liver (HepG2) 78965398 2247 108308171
chr17 78962131 78963064 ZNF274 GTRD no Liver (HepG2) 78965398 2334 108308172
chr17 78962133 78963043 ZNF274 GTRD no Liver (HepG2) 78965398 2355 108308173
chr17 78962134 78963216 ZNF274 GTRD no Liver (HepG2) 78965398 2182 108308174
chr17 78962135 78963151 ZNF274 GTRD no Liver (HepG2) 78965398 2247 108308175
chr17 78962136 78963090 ZNF274 GTRD no Liver (HepG2) 78965398 2308 108308176
chr17 78962136 78963225 ZNF274 GTRD no Liver (HepG2) 78965398 2173 108308177
chr17 78962137 78963060 ZNF274 GTRD no Liver (HepG2) 78965398 2338 108308178
chr17 78962140 78963041 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2357 108308179
chr17 78962140 78963115 ZNF274 GTRD no Liver (HepG2) 78965398 2283 108308180
chr17 78962141 78963282 ZNF274 GTRD no Liver (HepG2) 78965398 2116 108308181
chr17 78962159 78963208 ZNF274 GTRD no Liver (HepG2) 78965398 2190 108308182
chr17 78962162 78962898 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2500 108308183
chr17 78962169 78962889 ZNF274 GTRD no Bone Marrow (K562) 78965398 2509 108308184
chr17 78962170 78963108 ZNF274 GTRD no Liver (HepG2) 78965398 2290 108308185
chr17 78962172 78962942 ZNF274 GTRD no Liver (HepG2) 78965398 2456 108308186
chr17 78962173 78962838 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2560 108308187
chr17 78962178 78963095 ZNF274 GTRD no Liver (HepG2) 78965398 2303 108308188
chr17 78962184 78963149 ZNF274 GTRD no Liver (HepG2) 78965398 2249 108308189
chr17 78962187 78963312 ZNF274 GTRD no Liver (HepG2) 78965398 2086 108308190
chr17 78962196 78963079 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2319 108308191
chr17 78962198 78962897 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2501 108308192
chr17 78962199 78963112 ZNF274 GTRD no Liver (HepG2) 78965398 2286 108308193
chr17 78962201 78962900 ZNF274 GTRD no Bone Marrow (K562) 78965398 2498 108308194
chr17 78962208 78963003 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2395 108308195
chr17 78962208 78963147 ZNF274 GTRD no Liver (HepG2) 78965398 2251 108308196
chr17 78962209 78962862 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2536 108308197
chr17 78962209 78962930 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2468 108308198
chr17 78962221 78963126 ZNF274 GTRD no Liver (HepG2) 78965398 2272 108308199
chr17 78962222 78962920 ZNF274 GTRD no Liver (HepG2) 78965398 2478 108308200
chr17 78962224 78962874 ZNF274 GTRD no Liver (HepG2) 78965398 2524 108308201
chr17 78962226 78962867 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2531 108308202
chr17 78962227 78963097 ZNF274 GTRD no Liver (HepG2) 78965398 2301 108308203
chr17 78962228 78963035 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2363 108308204
chr17 78962236 78963030 ZNF274 GTRD no Liver (HepG2) 78965398 2368 108308205
chr17 78962242 78962838 ZNF274 GTRD no Liver (HepG2) 78965398 2560 108308206
chr17 78962247 78962898 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2500 108308207
chr17 78962247 78963127 ZNF274 GTRD no Liver (HepG2) 78965398 2271 108308208
chr17 78962247 78963150 ZNF274 GTRD no Liver (HepG2) 78965398 2248 108308209
chr17 78962248 78963063 ZNF274 GTRD no Liver (HepG2) 78965398 2335 108308210
chr17 78962250 78962864 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2534 108308211
chr17 78962260 78963020 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2378 108308212
chr17 78962263 78962942 ZNF274 GTRD no Liver (HepG2) 78965398 2456 108308213
chr17 78962264 78962876 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2522 108308214
chr17 78962265 78963040 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2358 108308215
chr17 78962268 78963014 ZNF274 GTRD no Liver (HepG2) 78965398 2384 108308216
chr17 78962271 78962863 ZNF274 GTRD no Liver (HepG2) 78965398 2535 108308217
chr17 78962275 78962869 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2529 108308218
chr17 78962296 78962869 ZNF274 GTRD no Blood (GM12878) 78965398 2529 108308219
chr17 78962307 78963001 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2397 108308220
chr17 78962309 78962922 ZNF274 GTRD no Liver (HepG2) 78965398 2476 108308221
chr17 78962327 78962850 ZNF274 GTRD no Liver (HepG2) 78965398 2548 108308222
chr17 78962327 78962914 ZNF274 GTRD no Cervix (HeLa-S3) 78965398 2484 108308223
chr17 78962334 78962943 ZNF274 GTRD no Liver (HepG2) 78965398 2455 108308224
chr17 78962456 78963079 ZNF274 GTRD no Liver (HepG2) 78965398 2319 108308225
chr17 78962645 78962981 ZNF143 GTRD no Epithelial (MCF-7) 78965398 2417 108308226
chr17 78962690 78963306 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2092 108308227
chr17 78962721 78963061 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2337 108308228
chr17 78962721 78963114 CHD2 UCSC Txn Factor no Conserved 78965398 2284 108308229
chr17 78962726 78963162 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2236 108308230
chr17 78962728 78963098 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 78965398 2300 108308231
chr17 78962734 78963114 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2284 108308232
chr17 78962740 78963130 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2268 108308233
chr17 78962748 78963024 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2374 108308234
chr17 78962755 78963135 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2263 108308235
chr17 78962756 78963355 CTCF UCSC Txn Factor no Conserved 78965398 2043 108308236
chr17 78962758 78963118 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2280 108308237
chr17 78962758 78963128 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2270 108308238
chr17 78962759 78963103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 78965398 2295 108308239
chr17 78962759 78963123 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2275 108308240
chr17 78962759 78963419 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 78965398 1979 108308241
chr17 78962764 78963154 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2244 108308242
chr17 78962765 78963141 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2257 108308243
chr17 78962776 78963056 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 78965398 2342 108308244
chr17 78962781 78963237 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2161 108308245
chr17 78962791 78963131 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2267 108308246
chr17 78962799 78963023 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2375 108308247
chr17 78962799 78963089 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2309 108308248
chr17 78962799 78963159 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2239 108308249
chr17 78962807 78963077 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2321 108308250
chr17 78962807 78963143 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 78965398 2255 108308251
chr17 78962811 78963101 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2297 108308252
chr17 78962818 78963068 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 78965398 2330 108308253
chr17 78962824 78963127 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2271 108308254
chr17 78962826 78963090 RAD21 UCSC Txn Factor no Conserved 78965398 2308 108308255
chr17 78962830 78963086 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2312 108308256
chr17 78962831 78963141 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2257 108308257
chr17 78962832 78963112 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2286 108308258
chr17 78962833 78963163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2235 108308259
chr17 78962834 78963094 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 78965398 2304 108308260
chr17 78962840 78963226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2172 108308261
chr17 78962842 78963072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 78965398 2326 108308262
chr17 78962842 78963132 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 78965398 2266 108308263
chr17 78962844 78962966 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2432 108308264
chr17 78962844 78963088 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 78965398 2310 108308265
chr17 78962849 78963044 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 78965398 2354 108308266
chr17 78962850 78963096 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 78965398 2302 108308267
chr17 78962852 78963116 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2282 108308268
chr17 78962854 78963068 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2330 108308269
chr17 78962855 78963045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2353 108308270
chr17 78962858 78962862 YY1 TRANSFAC yes 78965398 2536 21316545
chr17 78962862 78963138 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2260 108308271
chr17 78962863 78963123 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 78965398 2275 108308272
chr17 78962864 78962870 GATA3 JASPAR yes 78965398 2528 21316546
chr17 78962867 78962882 ZBTB33 JASPAR yes 78965398 2516 21316547
chr17 78962870 78962884 E2F7 JASPAR yes 78965398 2514 21316548
chr17 78962870 78963140 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2258 108308273
chr17 78962873 78963043 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2355 108308274
chr17 78962875 78963067 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 78965398 2331 108308275
chr17 78962882 78963011 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2387 108308276
chr17 78962884 78963001 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 78965398 2397 108308277
chr17 78962885 78962890 TFAP2A TRANSFAC yes 78965398 2508 21316549
chr17 78962885 78962891 MZF1 JASPAR yes 78965398 2507 21316550
chr17 78962896 78963156 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 78965398 2242 108308278
chr17 78962902 78962913 FOXH1 JASPAR yes 78965398 2485 21316551
chr17 78962903 78962909 ZNF354C JASPAR yes 78965398 2489 21316552
chr17 78962910 78963030 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 78965398 2368 108308279
chr17 78962939 78962958 CTCF JASPAR yes 78965398 2440 21316553
chr17 78962948 78963168 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 78965398 2230 108308280
SNPs associated with CHMP6[ENSG00000176108.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 78998263 rs115079934 T C 14946 Esophagus 0.000231997 5108772
chr17 78982282 rs6565522 A G 0 Heart 0.207925 5108465
chr17 78138903 rs12941971 C T 826495 Ovary 0.482118 5100464
chr17 78708418 rs9915378 A G 256980 Uterus 0.312575 5105071
chr17 79362574 rs12150093 C T 379257 Adrenal 0.209651 5113168
Details of CHMP6[ENSG00000176108.5]
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Genomic Location chr17:78965398-78983317[+]
TSS 78965398
Gene Name CHMP6
Ensembl ID ENSG00000176108.5
ENTREZID 79643
Uniprot
Q96FZ7
Protein Name
Charged multivesicular body protein 6
Expression levels of CHMP6[ENSG00000176108.5]
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