EnhancerDB
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Enhancers that regulate CDK5R1[ENSG00000176749.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 30711985 30718355 enh58749 30813637 95282
Skin (Keratinocyte) Liver (HepG2)
chr17 30723443 30723679 vista24428 30813637 89958
VISTA
chr17 30724674 30725107 vista24429 30813637 88530
VISTA
chr17 30726822 30727202 vista24430 30813637 86435
VISTA
chr17 30778136 30778420 vista24431 30813637 35217
VISTA
chr17 30783625 30787775 enh52464 30813637 25862
Large Intestine
chr17 30823818 30823986 vista24432 30813637 10181
VISTA
chr17 30828061 30836895 enh44411 30813637 14424
Blood (T-cell) Esophagus Blood (GM12878) Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
chr17 30830584 30830931 vista24433 30813637 16947
VISTA
chr17 30837973 30838187 vista24434 30813637 24336
VISTA
chr17 30840656 30854616 enh17103 30813637 27019
Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (GM12878) Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr17 30844051 30844402 vista24435 30813637 30414
VISTA
chr17 30846365 30846870 vista24436 30813637 32728
VISTA
chr17 30847234 30847756 vista24437 30813637 33597
VISTA
chr17 30850461 30850579 vista24438 30813637 36824
VISTA
chr17 30851083 30851355 vista24439 30813637 37446
VISTA
chr17 30866810 30871095 enh69258 30813637 53173
Neural Stem Cells (H9)
chr17 30876099 30888642 enh4363 30813637 62462
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 30886393 30886627 vista24440 30813637 72756
VISTA
chr17 30889305 30900495 enh44412 30813637 75668
Skin (Keratinocyte) Prostate (PC-3) Esophagus Bone (Osteoblast) Blood (GM12878) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
chr17 30903785 30907935 enh17104 30813637 90148
Placenta
chr17 30907001 30907345 vista24441 30813637 93364
VISTA
Transcript facotrs that regulate CDK5R1[ENSG00000176749.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with CDK5R1[ENSG00000176749.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 30124655 rs55767705 G A 688982 Esophagus 0.0311474 4828454
chr17 30124313 rs146877106 G A 689324 Heart 0.215544 4828444
chr17 31703034 rs6505338 T A 884760 Heart 0.371852 4836001
chr17 31637301 rs117547935 C T 819027 Pancreas 0.253854 4835743
chr17 29881356 rs59374944 T G 932281 Breast 0.270525 4826459
chr17 30123787 rs9905200 A G 689850 Thyroid 0.106994 4828438
chr17 30822607 rs62065492 C T 4333 Lung 0.000393296 4830995
chr17 31429419 rs112061787 T C 611145 Stomach 0.339041 4834160
chr17 30881674 rs16967400 T G 63400 Adrenal 0.0234892 4831567
Details of CDK5R1[ENSG00000176749.4]
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Genomic Location chr17:30813637-30818274[+]
TSS 30813637
Gene Name CDK5R1
Ensembl ID ENSG00000176749.4
ENTREZID 8851
Uniprot
Q8N619
Q15078
Protein Name
Cyclin-dependent kinase 5 activator
Cyclin-dependent kinase 5 activator 1
Expression levels of CDK5R1[ENSG00000176749.4]
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