EnhancerDB
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Enhancers that regulate CASKIN2[ENSG00000177303.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 73411265 73417455 enh52590 73511664 94209
Large Intestine
chr17 73418765 73428832 enh17376 73511664 82832
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 73426423 73426691 vista25979 73511664 84973
VISTA
chr17 73434845 73446815 enh17377 73511664 64849
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus
chr17 73447245 73452495 enh32360 73511664 59169
Bone Marrow (K562) Liver (HepG2) Large Intestine Astrocyte Epithelial (MCF-7)
chr17 73456096 73456218 vista25980 73511664 55446
VISTA
chr17 73456599 73456615 vista25981 73511664 55049
VISTA
chr17 73462394 73471595 enh62653 73511664 40069
Esophagus Liver (HepG2) Stomach Heart
chr17 73474410 73478836 enh44490 73511664 32828
Muscle (Myotube) Brain (SK-N-SH)
chr17 73514344 73514665 vista25982 73511664 2680
VISTA
chr17 73525565 73534090 enh107725 73511664 13901
Cervix (HeLa-S3) Blood (T-cell)
chr17 73531533 73531826 vista25983 73511664 19869
VISTA
chr17 73541846 73552035 enh17378 73511664 30182
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Placenta Colon (HCT116) Thyroid Pancreas Epithelial (MCF-7)
chr17 73545364 73545732 vista25984 73511664 33700
VISTA
chr17 73546030 73546166 vista25985 73511664 34366
VISTA
chr17 73571945 73577255 enh52591 73511664 60281
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Pancreas Stomach
chr17 73599541 73603669 enh86270 73511664 87877
Colon (HCT116)
Transcript facotrs that regulate CASKIN2[ENSG00000177303.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 73514356 73514366 MAX JASPAR yes 73511664 2692 21296436
chr17 73514370 73514374 YY1 TRANSFAC yes 73511664 2706 21296437
chr17 73514398 73514404 YY1 JASPAR yes 73511664 2734 21296438
chr17 73514411 73514421 SP1 JASPAR yes 73511664 2747 21296439
chr17 73514411 73514665 RUNX3 UCSC Txn Factor no Conserved 73511664 2747 108294339
chr17 73514411 73514665 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 73511664 2747 108294340
chr17 73514424 73514436 TFAP2A JASPAR yes 73511664 2760 21296440
chr17 73514424 73514436 TFAP2B JASPAR yes 73511664 2760 21296441
chr17 73514424 73514436 TFAP2C JASPAR yes 73511664 2760 21296442
chr17 73514424 73514439 TFAP2A JASPAR yes 73511664 2760 21296443
chr17 73514424 73514439 TFAP2C JASPAR yes 73511664 2760 21296444
chr17 73514425 73514434 TFAP2A JASPAR yes 73511664 2761 21296445
chr17 73514426 73514435 TFAP2A JASPAR yes 73511664 2762 21296446
chr17 73514442 73514457 NR2C2 JASPAR yes 73511664 2778 21296447
chr17 73514445 73514457 INSM1 JASPAR yes 73511664 2781 21296448
chr17 73514452 73514456 LFA1 TRANSFAC yes 73511664 2788 21296449
chr17 73514454 73514468 GATA2 JASPAR yes 73511664 2790 21296450
chr17 73514456 73514464 GATA3 JASPAR yes 73511664 2792 21296451
chr17 73514456 73514464 GATA5 JASPAR yes 73511664 2792 21296452
chr17 73514460 73514672 SPI1 UCSC Txn Factor no Conserved 73511664 2796 108294341
chr17 73514461 73514476 STAT2 JASPAR yes 73511664 2797 21296453
chr17 73514462 73514671 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 73511664 2798 108294342
chr17 73514468 73514672 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 73511664 2804 108294343
chr17 73514501 73514519 IRF2 JASPAR yes 73511664 2837 21296454
chr17 73514502 73514514 IRF1 JASPAR yes 73511664 2838 21296455
chr17 73514542 73514556 SPI1 JASPAR yes 73511664 2878 21296456
chr17 73514543 73514556 ELF1 JASPAR yes 73511664 2879 21296457
chr17 73514544 73514556 EHF JASPAR yes 73511664 2880 21296458
chr17 73514544 73514556 ELF1 JASPAR yes 73511664 2880 21296459
chr17 73514544 73514556 ELF4 JASPAR yes 73511664 2880 21296460
chr17 73514544 73514557 ELF3 JASPAR yes 73511664 2880 21296461
chr17 73514545 73514556 ELF5 JASPAR yes 73511664 2881 21296462
chr17 73514546 73514552 PEA3 TRANSFAC yes 73511664 2882 21296463
chr17 73514546 73514556 ETV6 JASPAR yes 73511664 2882 21296464
chr17 73514546 73514557 ELK4 JASPAR yes 73511664 2882 21296465
chr17 73514546 73514557 FLI1 JASPAR yes 73511664 2882 21296466
chr17 73514547 73514555 EHF JASPAR yes 73511664 2883 21296467
chr17 73514548 73514555 SPI1 JASPAR yes 73511664 2884 21296468
chr17 73514589 73514599 MZF1 JASPAR yes 73511664 2925 21296469
chr17 73514592 73514612 PPARG JASPAR yes 73511664 2928 21296470
chr17 73514594 73514612 NR3C1 JASPAR yes 73511664 2930 21296471
chr17 73514597 73514609 TEAD1 JASPAR yes 73511664 2933 21296472
chr17 73514598 73514612 GATA2 JASPAR yes 73511664 2934 21296473
chr17 73514602 73514610 GATA3 JASPAR yes 73511664 2938 21296474
chr17 73514602 73514610 GATA5 JASPAR yes 73511664 2938 21296475
chr17 73514613 73514620 SPIB JASPAR yes 73511664 2949 21296476
SNPs associated with CASKIN2[ENSG00000177303.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 73196329 rs11077779 C T 300013 Esophagus 0.143258 5054830
chr17 73377676 rs6501784 C A 118666 Esophagus 0.0383851 5056376
chr17 73507993 rs796927034 GC G 0 Heart 0.00393336 5057524
chr17 73507993 rs796927034 GC G 0 Heart 0.020087 5057524
chr17 73546307 rs73364218 C A,T 34643 Pancreas 0.12116 5057792
chr17 72519798 rs1472726 C T 976544 Breast 0.135364 5050412
chr17 74124405 rs4788914 A C 612741 Spleen 0.243937 5060539
chr17 73450862 rs4073989 G A 45480 Lung 0.0245876 5057289
Details of CASKIN2[ENSG00000177303.5]
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Genomic Location chr17:73496342-73511664[-]
TSS 73511664
Gene Name CASKIN2
Ensembl ID ENSG00000177303.5
ENTREZID 57513
Uniprot
Q8WXE0
Protein Name
Caskin-2
Expression levels of CASKIN2[ENSG00000177303.5]
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