EnhancerDB
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Enhancers that regulate TMEM52[ENSG00000178821.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 1750265 1755569 enh4 1850712 95143
Blood (OCI-LY7) Blood (Karpas-422)
chr1 1756685 1769407 enh5 1850712 81305
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422)
chr1 1770710 1799155 enh6 1850712 51557
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 1772108 1772256 vista48 1850712 78456
VISTA
chr1 1793829 1793862 vista49 1850712 56850
VISTA
chr1 1802728 1810244 enh7 1850712 40468
Bone (Osteoblast) Blood (Karpas-422) Heart
chr1 1803114 1803303 vista50 1850712 47409
VISTA
chr1 1810253 1817136 enh26490 1850712 33576
Liver (HepG2) Brain (SK-N-SH) Large Intestine Astrocyte Colon (HCT116) Thyroid Neural Stem Cells (H9) Stomach
chr1 1814762 1815124 vista51 1850712 35588
VISTA
chr1 1823942 1833298 enh60079 1850712 17414
Peripheral Blood (MM.1S) Blood (OCI-LY7) Stomach
chr1 1835043 1841115 enh8 1850712 9597
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
chr1 1840449 1840835 vista52 1850712 9877
VISTA
chr1 1925685 1934195 enh11416 1850712 74973
Placenta Brain (SK-N-MC)
Transcript facotrs that regulate TMEM52[ENSG00000178821.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with TMEM52[ENSG00000178821.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 1141193 rs11466682 G A 707836 Esophagus 0.307255 4395
chr1 2380402 rs72924980 G A 529690 Thyroid 0.151197 14000
chr1 919855 rs116781904 G A 929174 Lung 0.234947 1454
chr1 1092563 rs57527288 G T 756466 Stomach 0.0651239 3764
Details of TMEM52[ENSG00000178821.8]
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Genomic Location chr1:1849029-1850712[-]
TSS 1850712
Gene Name TMEM52
Ensembl ID ENSG00000178821.8
ENTREZID 339456
Uniprot
Q8NDY8
Protein Name
Transmembrane protein 52
Expression levels of TMEM52[ENSG00000178821.8]
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