EnhancerDB
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Enhancers that regulate NKX2-5[ENSG00000183072.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 172588377 172598615 enh66133 172662360 63745
Spleen Heart
chr5 172620770 172633535 enh66134 172662360 28825
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung Lung (PC-9) Heart Epithelial (MCF-7)
chr5 172632796 172633597 vista1400 172662360 28763
VISTA
chr5 172652687 172657384 enh66135 172662360 4976
Heart
chr5 172663658 172663862 vista50204 172662360 1298
VISTA
chr5 172673091 172677782 enh66136 172662360 10731
Heart
chr5 172681967 172686540 enh66137 172662360 19607
Lung Heart
chr5 172682692 172685952 vista1401 172662360 20332
VISTA
chr5 172691485 172700950 enh8882 172662360 29125
Spleen Muscle (Myotube) Blood (Karpas-422) Heart
chr5 172692201 172696969 vista1402 172662360 29841
VISTA
chr5 172695992 172696368 vista50205 172662360 33632
VISTA
chr5 172698519 172698848 vista50206 172662360 36159
VISTA
chr5 172705328 172708211 vista1403 172662360 42968
VISTA
chr5 172707053 172713046 enh66138 172662360 44693
Pancreas Neural Stem Cells (H9) Heart
chr5 172710965 172711353 vista50207 172662360 48605
VISTA
chr5 172714625 172733895 enh22820 172662360 52265
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
chr5 172729503 172729731 vista50208 172662360 67143
VISTA
chr5 172730964 172731211 vista50209 172662360 68604
VISTA
chr5 172735705 172749689 enh22821 172662360 73345
Brain (SK-N-SH) Bone (Osteoblast) Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
chr5 172761341 172761739 vista50210 172662360 98981
VISTA
Transcript facotrs that regulate NKX2-5[ENSG00000183072.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr5 172657340 172657360 RREB1 JASPAR yes 172662360 5000 67859590
chr5 172657376 172657381 MYC TRANSFAC yes 172662360 4979 67859593
chr5 172663266 172666302 EZH2 UCSC Txn Factor no Conserved 172662360 906 108537545
chr5 172663658 172663663 TFAP2A TRANSFAC yes 172662360 1298 70765242
chr5 172663658 172663664 MZF1 JASPAR yes 172662360 1298 70765243
chr5 172663695 172663704 NFIX JASPAR yes 172662360 1335 70765244
chr5 172663696 172663702 NFIC JASPAR yes 172662360 1336 70765245
chr5 172663724 172663729 SP1 TRANSFAC yes 172662360 1364 70765246
chr5 172663763 172663774 NRF1 JASPAR yes 172662360 1403 70765247
chr5 172663784 172663790 PEA3 TRANSFAC yes 172662360 1424 70765248
chr5 172663793 172663809 SRF JASPAR yes 172662360 1433 70765249
chr5 172663793 172663811 SRF JASPAR yes 172662360 1433 70765250
chr5 172663803 172663808 TFAP2A TRANSFAC yes 172662360 1443 70765251
chr5 172663803 172663809 MZF1 JASPAR yes 172662360 1443 70765252
chr5 172663820 172663824 NFE TRANSFAC yes 172662360 1460 70765253
chr5 172663822 172663835 HSF1 JASPAR yes 172662360 1462 70765254
chr5 172663822 172663835 HSF2 JASPAR yes 172662360 1462 70765255
chr5 172663822 172663835 HSF4 JASPAR yes 172662360 1462 70765256
SNPs associated with NKX2-5[ENSG00000183072.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 172675053 rs62378333 C G 12693 Heart 0.183088 8708269
chr5 172293335 rs793029 C A,T 365777 Breast 0.406162 8705894
chr5 172736916 rs76519209 C T 74556 Spleen 0.287752 8708879
chr5 172707463 rs11134786 C T 45103 Thyroid 0.25017 8708505
Details of NKX2-5[ENSG00000183072.9]
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Genomic Location chr5:172659112-172662360[-]
TSS 172662360
Gene Name NKX2-5
Ensembl ID ENSG00000183072.9
ENTREZID 1482
Uniprot
E5RH49
A0A0S2Z383
P52952
A0A0S2Z3K2
Protein Name
Homeobox protein Nkx-2.5
NK2 transcription factor related locus 5
NK2 transcription factor related locus 5 isoform 1
NK2 transcription factor related locus 5 isoform 2
Expression levels of NKX2-5[ENSG00000183072.9]
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