EnhancerDB
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Enhancers that regulate NHLRC4[ENSG00000257108.1]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 515994 523755 enh31662 616996 93241
Astrocyte Brain (SK-N-SH)
chr16 524196 530055 enh52186 616996 86941
Large Intestine Heart
chr16 548771 552995 enh64931 616996 64001
Liver (HepG2) Heart
chr16 575519 575832 vista21515 616996 41164
VISTA
chr16 578748 579156 vista21516 616996 37840
VISTA
chr16 591405 595555 enh52187 616996 21441
Large Intestine
chr16 612039 612238 vista21517 616996 4758
VISTA
chr16 615969 616302 vista21518 616996 694
VISTA
chr16 640431 645880 enh16491 616996 23435
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
chr16 643606 643989 vista21519 616996 26610
VISTA
chr16 648945 656215 enh47911 616996 31949
Thymus
chr16 651803 652154 vista21520 616996 34807
VISTA
chr16 656285 663385 enh47912 616996 39289
Esophagus Thymus Prostate (RWPE1) Stomach
chr16 658205 658397 vista21521 616996 41209
VISTA
chr16 668836 673975 enh58692 616996 51840
Esophagus Skin (Keratinocyte) Stomach
Transcript facotrs that regulate NHLRC4[ENSG00000257108.1]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 612043 612058 RUNX2 JASPAR yes 616996 4938 49325090
chr16 612055 612070 FOXA1 JASPAR yes 616996 4926 49325091
chr16 612081 612092 NRF1 JASPAR yes 616996 4904 49325092
chr16 612098 612112 GLIS2 JASPAR yes 616996 4884 49325093
chr16 612108 612120 HES5 JASPAR yes 616996 4876 49325094
chr16 612108 612120 HES7 JASPAR yes 616996 4876 49325095
chr16 612120 612125 SP1 TRANSFAC yes 616996 4871 49325096
chr16 612153 612171 E2F3 JASPAR yes 616996 4825 49325097
chr16 612173 612187 GLIS2 JASPAR yes 616996 4809 49325098
chr16 612173 612187 GLIS3 JASPAR yes 616996 4809 49325099
chr16 612187 612192 TFAP2A TRANSFAC yes 616996 4804 49325100
chr16 612187 612193 MZF1 JASPAR yes 616996 4803 49325101
chr16 612209 612221 GLI2 JASPAR yes 616996 4775 49325102
chr16 612213 612809 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 616996 4187 108170772
chr16 615969 615981 INSM1 JASPAR yes 616996 1015 49325103
chr16 615988 616458 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 616996 538 108170773
chr16 615994 616006 PKNOX1 JASPAR yes 616996 990 49325104
chr16 615994 616006 PKNOX2 JASPAR yes 616996 990 49325105
chr16 615994 616006 TGIF1 JASPAR yes 616996 990 49325106
chr16 615994 616006 TGIF2 JASPAR yes 616996 990 49325107
chr16 616009 616028 PAX5 JASPAR yes 616996 968 49325108
chr16 616022 616033 E2F6 JASPAR yes 616996 963 49325109
chr16 616059 616063 LFA1 TRANSFAC yes 616996 933 49325110
chr16 616063 616084 ZNF263 JASPAR yes 616996 912 49325111
chr16 616070 616074 LFA1 TRANSFAC yes 616996 922 49325112
chr16 616079 616085 MAZ TRANSFAC yes 616996 911 49325113
chr16 616083 616439 GATA2 UCSC Txn Factor no Conserved 616996 557 108170774
chr16 616084 616088 LFA1 TRANSFAC yes 616996 908 49325114
chr16 616087 616101 PLAG1 JASPAR yes 616996 895 49325115
chr16 616092 616104 ZBTB7B JASPAR yes 616996 892 49325116
chr16 616115 616126 EBF1 JASPAR yes 616996 870 49325117
chr16 616135 616155 RREB1 JASPAR yes 616996 841 49325118
chr16 616144 616149 SP1 TRANSFAC yes 616996 847 49325119
chr16 616144 616156 GLI2 JASPAR yes 616996 840 49325120
chr16 616151 616163 TEAD1 JASPAR yes 616996 833 49325121
chr16 616170 616190 RREB1 JASPAR yes 616996 806 49325122
chr16 616179 616189 ZNF740 JASPAR yes 616996 807 49325123
chr16 616179 616193 GLIS2 JASPAR yes 616996 803 49325124
chr16 616179 616193 GLIS3 JASPAR yes 616996 803 49325125
chr16 616183 616194 EBF1 JASPAR yes 616996 802 49325126
chr16 616220 616232 INSM1 JASPAR yes 616996 764 49325127
chr16 616225 616230 SP1 TRANSFAC yes 616996 766 49325128
chr16 616226 616246 TP63 JASPAR yes 616996 750 49325129
chr16 616228 616243 TP53 JASPAR yes 616996 753 49325130
chr16 616254 616262 BSX JASPAR yes 616996 734 49325131
chr16 616256 616260 YY1 TRANSFAC yes 616996 736 49325132
chr16 616259 616262 MYB TRANSFAC yes 616996 734 49325133
chr16 616271 616277 GATA3 JASPAR yes 616996 719 49325134
chr16 616272 616285 ATF4 JASPAR yes 616996 711 49325135
chr16 616288 616298 SP1 JASPAR yes 616996 698 49325136
chr16 616293 616302 TFAP2A JASPAR yes 616996 694 49325137
SNPs associated with NHLRC4[ENSG00000257108.1], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 1235230 rs150147254 C T 615735 Esophagus 0.277675 4254409
chr16 619822 rs3833959 T TGGCGGCCCGGAGGCA 327 Esophagus 0.0289727 4247269
chr16 759178 rs9939965 A C 139683 Heart 0.279107 4248403
chr16 1242300 rs57734057 T C 622805 Spleen 0.093244 4254599
chr16 335619 rs45612235 G A,C 281377 Uterus 0.197098 4244955
chr16 728514 rs72773411 G A 109019 Thyroid 0.263683 4248178
Details of NHLRC4[ENSG00000257108.1]
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Genomic Location chr16:616996-619495[+]
TSS 616996
Gene Name NHLRC4
Ensembl ID ENSG00000257108.1
ENTREZID 283948
Uniprot
P0CG21
Protein Name
NHL-repeat-containing protein 4
Expression levels of NHLRC4[ENSG00000257108.1]
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