EnhancerDB
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Enhancers that regulate SMIM6[ENSG00000259120.2]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 73541846 73552035 enh17378 73642323 90288
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Placenta Colon (HCT116) Thyroid Pancreas Epithelial (MCF-7)
chr17 73545364 73545732 vista25984 73642323 96591
VISTA
chr17 73546030 73546166 vista25985 73642323 96157
VISTA
chr17 73571945 73577255 enh52591 73642323 65068
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Pancreas Stomach
chr17 73599541 73603669 enh86270 73642323 38654
Colon (HCT116)
chr17 73631575 73631992 vista25986 73642323 10331
VISTA
chr17 73641652 73641951 vista25987 73642323 372
VISTA
chr17 73668800 73695855 enh17379 73642323 26477
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 73684314 73684419 vista25988 73642323 41991
VISTA
chr17 73685500 73685825 vista25989 73642323 43177
VISTA
chr17 73689850 73690283 vista25990 73642323 47527
VISTA
chr17 73691946 73692277 vista25991 73642323 49623
VISTA
chr17 73696530 73696897 vista25992 73642323 54207
VISTA
chr17 73718198 73718514 vista25993 73642323 75875
VISTA
chr17 73719261 73719909 vista25994 73642323 76938
VISTA
chr17 73734249 73734591 vista25995 73642323 91926
VISTA
Transcript facotrs that regulate SMIM6[ENSG00000259120.2]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 73641303 73641655 ZBTB33 GTRD no Brain (SK-N-SH) 73642323 668 108294430
chr17 73641364 73641934 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 73642323 389 108294431
chr17 73641422 73642695 ZNF143 GTRD no Epithelial (MCF-7) 73642323 372 108294432
chr17 73641460 73641930 GATA3 UCSC Txn Factor no Conserved 73642323 393 108294433
chr17 73641460 73641930 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 73642323 393 108294434
chr17 73641483 73642139 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 73642323 184 108294435
chr17 73641534 73641944 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 73642323 379 108294436
chr17 73641574 73641854 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 73642323 469 108294437
chr17 73641580 73642473 ZNF143 GTRD no Epithelial (MCF-7) 73642323 150 108294438
chr17 73641657 73641660 MYB TRANSFAC yes 73642323 663 21296642
chr17 73641696 73641711 ZIC4 JASPAR yes 73642323 612 21296643
chr17 73641719 73641728 NFIX JASPAR yes 73642323 595 21296644
chr17 73641721 73641727 NFIC JASPAR yes 73642323 596 21296645
chr17 73641724 73642352 ZNF274 GTRD no Bone Marrow (K562) 73642323 29 108294439
chr17 73641750 73641771 IRF1 JASPAR yes 73642323 552 21296646
chr17 73641752 73641757 ETS2 TRANSFAC yes 73642323 566 21296647
chr17 73641752 73641767 IRF9 JASPAR yes 73642323 556 21296648
chr17 73641753 73641767 IRF7 JASPAR yes 73642323 556 21296649
chr17 73641753 73641767 IRF8 JASPAR yes 73642323 556 21296650
chr17 73641754 73641768 STAT1 JASPAR yes 73642323 555 21296651
chr17 73641773 73641776 MYB TRANSFAC yes 73642323 547 21296652
chr17 73641780 73641784 ESR1 TRANSFAC yes 73642323 539 21296653
chr17 73641782 73642280 TCF7L2 GTRD no Colon (HCT116) 73642323 43 108294440
chr17 73641788 73641793 SP1 TRANSFAC yes 73642323 530 21296654
chr17 73641806 73641816 MYF6 JASPAR yes 73642323 507 21296655
chr17 73641819 73642425 ZNF274 GTRD no Blood (GM12878) 73642323 102 108294441
chr17 73641831 73642207 ZNF143 GTRD no Epithelial (MCF-7) 73642323 116 108294442
chr17 73641832 73641836 NFE TRANSFAC yes 73642323 487 21296656
chr17 73641837 73642320 ZNF274 GTRD no Blood (GM12878) 73642323 3 108294443
chr17 73641841 73641856 RFX5 JASPAR yes 73642323 467 21296657
chr17 73641847 73642191 ZNF274 GTRD no Bone Marrow (K562) 73642323 132 108294444
chr17 73641849 73641857 TBX5 JASPAR yes 73642323 466 21296658
chr17 73641849 73641858 ZEB1 JASPAR yes 73642323 465 21296659
chr17 73641850 73641860 ID4 JASPAR yes 73642323 463 21296660
chr17 73641850 73641860 TCF3 JASPAR yes 73642323 463 21296661
chr17 73641850 73641860 TCF4 JASPAR yes 73642323 463 21296662
chr17 73641852 73641857 USF2 TRANSFAC yes 73642323 466 21296663
chr17 73641856 73641861 TFAP2A TRANSFAC yes 73642323 462 21296664
chr17 73641856 73641862 MZF1 JASPAR yes 73642323 461 21296665
chr17 73641858 73641871 NFKB1 JASPAR yes 73642323 452 21296666
chr17 73641866 73641871 USF2 TRANSFAC yes 73642323 452 21296667
chr17 73641870 73641875 TFAP2A TRANSFAC yes 73642323 448 21296668
chr17 73641870 73641876 MZF1 JASPAR yes 73642323 447 21296669
chr17 73641874 73641889 FOXP1 JASPAR yes 73642323 434 21296670
chr17 73641875 73641886 FOXA1 JASPAR yes 73642323 437 21296671
chr17 73641875 73641890 FOXA1 JASPAR yes 73642323 433 21296672
chr17 73641876 73641887 FOXB1 JASPAR yes 73642323 436 21296673
chr17 73641876 73641887 FOXC1 JASPAR yes 73642323 436 21296674
chr17 73641876 73641888 FOXC2 JASPAR yes 73642323 435 21296675
chr17 73641877 73641888 FOXP2 JASPAR yes 73642323 435 21296676
chr17 73641878 73641886 FOXO3 JASPAR yes 73642323 437 21296677
chr17 73641879 73641886 FOXD2 JASPAR yes 73642323 437 21296678
chr17 73641879 73641886 FOXI1 JASPAR yes 73642323 437 21296679
chr17 73641879 73641886 FOXL1 JASPAR yes 73642323 437 21296680
chr17 73641879 73641886 FOXO4 JASPAR yes 73642323 437 21296681
chr17 73641879 73641886 FOXO6 JASPAR yes 73642323 437 21296682
chr17 73641879 73641886 FOXP3 JASPAR yes 73642323 437 21296683
chr17 73641879 73641887 FOXD1 JASPAR yes 73642323 436 21296684
chr17 73641879 73641887 FOXG1 JASPAR yes 73642323 436 21296685
chr17 73641879 73641887 FOXO3 JASPAR yes 73642323 436 21296686
chr17 73641879 73641888 SRY JASPAR yes 73642323 435 21296687
chr17 73641890 73641909 RFX2 JASPAR yes 73642323 414 21296688
chr17 73641892 73641907 RFX5 JASPAR yes 73642323 416 21296689
chr17 73641916 73641920 TEAD2 TRANSFAC yes 73642323 403 21296690
chr17 73641916 73641926 NKX2-3 JASPAR yes 73642323 397 21296691
chr17 73641917 73641926 NKX3-2 JASPAR yes 73642323 397 21296692
chr17 73641926 73641936 FIGLA JASPAR yes 73642323 387 21296693
chr17 73641926 73641936 TCF4 JASPAR yes 73642323 387 21296694
chr17 73641928 73641937 ZEB1 JASPAR yes 73642323 386 21296695
chr17 73641930 73641935 SP1 TRANSFAC yes 73642323 388 21296696
chr17 73641933 73641938 SP1 TRANSFAC yes 73642323 385 21296697
chr17 73641937 73641946 HIC2 JASPAR yes 73642323 377 21296698
chr17 73641940 73641944 LFA1 TRANSFAC yes 73642323 379 21296699
chr17 73641943 73641947 YY1 TRANSFAC yes 73642323 376 21296700
chr17 73641951 73642772 POLR2A UCSC Txn Factor no Conserved 73642323 372 108294445
SNPs associated with SMIM6[ENSG00000259120.2], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 72975555 rs8081467 G A 666768 Esophagus 0.0967003 5052962
chr17 74315738 rs139823099 C T 671681 Spleen 0.279406 5062039
chr17 74267228 rs142765345 G GA 623171 Stomach 0.237424 5061859
Details of SMIM6[ENSG00000259120.2]
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Genomic Location chr17:73642323-73644057[+]
TSS 73642323
Gene Name SMIM6
Ensembl ID ENSG00000259120.2
ENTREZID 100130933
Uniprot
P0DI80
Protein Name
Small integral membrane protein 6
Expression levels of SMIM6[ENSG00000259120.2]
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