EnhancerDB
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  3. AL589739.1[ENSG00000269753.1]
Enhancers that regulate AL589739.1[ENSG00000269753.1]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 2162230 2193653 enh11423 2258581 64928
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 2162325 2162996 vista62 2258581 95585
VISTA
chr1 2171824 2171946 vista63 2258581 86635
VISTA
chr1 2172142 2172385 vista64 2258581 86196
VISTA
chr1 2177615 2177829 vista65 2258581 80752
VISTA
chr1 2190530 2190674 vista66 2258581 67907
VISTA
chr1 2194994 2213473 enh11424 2258581 45108
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
chr1 2213745 2234616 enh11425 2258581 23965
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr1 2221868 2222548 vista67 2258581 36033
VISTA
chr1 2230678 2230895 vista68 2258581 27686
VISTA
chr1 2231691 2232185 vista69 2258581 26396
VISTA
chr1 2232428 2232896 vista70 2258581 25685
VISTA
chr1 2238957 2252675 enh11426 2258581 5906
Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Thymus Heart
chr1 2245775 2246116 vista71 2258581 12465
VISTA
chr1 2246556 2246763 vista72 2258581 11818
VISTA
chr1 2253622 2253773 vista73 2258581 4808
VISTA
chr1 2254081 2254230 vista74 2258581 4351
VISTA
chr1 2273378 2284472 enh89452 2258581 14797
Brain (SK-N-SH) Prostate (RWPE1)
chr1 2310545 2316376 enh11427 2258581 51964
Liver (HepG2) Prostate (RWPE1) Ovary Esophagus Muscle (A673) Placenta Pancreas Breast Spleen Uterus
Transcript facotrs that regulate AL589739.1[ENSG00000269753.1]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 2253322 2254585 ZNF274 GTRD no Blood (GM12878) 2258581 3996 107801823
chr1 2253322 2254585 ZNF274 GTRD no Blood (GM12878) 2258581 3996 107801824
chr1 2253631 2253637 TCF1 TRANSFAC yes 2258581 4944 118216669
chr1 2253644 2253655 CDX2 JASPAR yes 2258581 4926 118216670
chr1 2253644 2253655 RUNX1 JASPAR yes 2258581 4926 118216671
chr1 2253645 2253656 HOXA10 JASPAR yes 2258581 4925 118216672
chr1 2253646 2253655 CDX1 JASPAR yes 2258581 4926 118216673
chr1 2253646 2253656 HOXA13 JASPAR yes 2258581 4925 118216674
chr1 2253646 2253656 HOXB13 JASPAR yes 2258581 4925 118216675
chr1 2253646 2253656 HOXD13 JASPAR yes 2258581 4925 118216676
chr1 2253646 2253667 IRF1 JASPAR yes 2258581 4914 118216677
chr1 2253650 2253656 TBP TRANSFAC yes 2258581 4925 118216678
chr1 2253650 2253665 PRDM1 JASPAR yes 2258581 4916 118216679
chr1 2253654 2253665 FOXC1 JASPAR yes 2258581 4916 118216680
chr1 2253669 2253672 MYB TRANSFAC yes 2258581 4909 118216681
chr1 2253678 2253697 RFX2 JASPAR yes 2258581 4884 118216682
chr1 2253682 2253698 RFX2 JASPAR yes 2258581 4883 118216683
chr1 2253682 2253698 RFX3 JASPAR yes 2258581 4883 118216684
chr1 2253682 2253698 RFX4 JASPAR yes 2258581 4883 118216685
chr1 2253682 2253698 RFX5 JASPAR yes 2258581 4883 118216686
chr1 2253683 2253702 RFX2 JASPAR yes 2258581 4879 118216687
chr1 2253702 2253712 MZF1 JASPAR yes 2258581 4869 118216688
chr1 2253705 2253711 SP1 TRANSFAC yes 2258581 4870 118216689
chr1 2253705 2253715 SP1 JASPAR yes 2258581 4866 118216690
chr1 2253708 2253719 EBF1 JASPAR yes 2258581 4862 118216691
chr1 2253715 2253735 TP63 JASPAR yes 2258581 4846 118216692
chr1 2253718 2253733 TP53 JASPAR yes 2258581 4848 118216693
chr1 2253740 2253750 NFATC3 JASPAR yes 2258581 4831 118216694
chr1 2253742 2253749 NFATC2 JASPAR yes 2258581 4832 118216695
chr1 2254096 2254101 SP1 TRANSFAC yes 2258581 4480 118216696
chr1 2254099 2254104 SP1 TRANSFAC yes 2258581 4477 118216697
chr1 2254103 2254109 PEA3 TRANSFAC yes 2258581 4472 118216698
chr1 2254106 2254117 NFKB1 JASPAR yes 2258581 4464 118216699
chr1 2254134 2254142 FOXO3 JASPAR yes 2258581 4439 118216700
chr1 2254134 2254149 STAT1 JASPAR yes 2258581 4432 118216701
chr1 2254136 2254147 STAT3 JASPAR yes 2258581 4434 118216702
chr1 2254149 2254166 BCL6B JASPAR yes 2258581 4415 118216703
chr1 2254158 2254173 RFX5 JASPAR yes 2258581 4408 118216704
chr1 2254184 2254205 REST JASPAR yes 2258581 4376 118216705
chr1 2254185 2254200 RFX5 JASPAR yes 2258581 4381 118216706
chr1 2254196 2254217 REST JASPAR yes 2258581 4364 118216707
chr1 2254197 2254216 REST JASPAR yes 2258581 4365 118216708
chr1 2254203 2254212 TFAP2A JASPAR yes 2258581 4369 118216709
chr1 2254208 2254213 SP1 TRANSFAC yes 2258581 4368 118216710
chr1 2254225 2254229 LFA1 TRANSFAC yes 2258581 4352 118216711
SNPs associated with AL589739.1[ENSG00000269753.1], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 1294411 rs183005773 C T 964170 Esophagus 0.153066 5997
chr1 2811917 rs149359043 C T 552875 Breast 0.35737 15783
chr1 3148153 rs2651920 T C 889111 Liver 0.481246 19284
chr1 1294411 rs183005773 C T 964170 Stomach 0.552365 5997
Details of AL589739.1[ENSG00000269753.1]
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Genomic Location chr1:2258581-2259042[+]
TSS 2258581
Gene Name AL589739.1
Ensembl ID ENSG00000269753.1
ENTREZID
Uniprot
Protein Name
Expression levels of AL589739.1[ENSG00000269753.1]
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