1.ecDNA/eccDNA datasets in Homo sapiens. |
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| 2.ecDNA/eccDNA datasets in Mus musculus. |
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| 3.eccDNA datasets in Yeast. |
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| 4.eccDNA datasets in Gallus gallus. |
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| 5.eccDNA datasets in Arabidopsis thaliana. |
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| 6.eccDNA datasets in other species. |
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7.Enhancer datasets used in eccDNA Atlas. |
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| 8.Super-enhancer datasets used in eccDNA Atlas. |
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| 9.SNP datasets used in eccDNA Atlas. |
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| 10.eQTL datasets used in eccDNA Atlas. |
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| 11.CTCF binding site datasets used in eccDNA Atlas. |
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| 12.Chromatin accessibility peak datasets used in eccDNA Atlas. |
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| 13.Enhancers data identified in 20 TCGA tumors. |
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| Items | Description |
|---|---|
| eccDNA ID | Numbers named according to order and species. |
| Species | Species information corresponding to eccDNA. |
| eccDNA type | Types of eccDNA(microDNA,eccDNA,spcDNA,etc). |
| Location | Genomic location of eccDNA. |
| Health/Disease | Judgment of whether eccDNA belongs to the type of health or disease. |
| Tissue/Cell line | The specific tissue or cells used in the experiment or prediction. |
| Disease name | The specific disease name corresponding to eccDNA. |
| Experiment/Prediction | Determine whether eccDNA is obtained by prediction or experimental confirmation. |
| Validation strategies | specific validation strategies(FISH,DNA-sequencing,ecc_finder,etc). |
| Pubmed ID | PMID of the article. |
