EnhancerDB
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Enhancers that regulate SPAG9[ENSG00000008294.16]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 49104529 49108791 enh4465 49198226 89435
Blood (OCI-LY7) Blood (Karpas-422)
chr17 49110885 49117755 enh4466 49198226 80471
Brain (SK-N-MC) Astrocyte Muscle (A673) Blood (Karpas-422) Pancreas Spleen Thymus
chr17 49122205 49131895 enh4467 49198226 66331
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422)
chr17 49132219 49145135 enh4468 49198226 53091
Skin (Keratinocyte) Prostate (PC-3) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9)
chr17 49142836 49143005 vista25136 49198226 55221
VISTA
chr17 49145605 49149795 enh4469 49198226 48431
Prostate (PC-3) Blood (Karpas-422)
chr17 49159468 49177825 enh4470 49198226 20401
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
chr17 49178525 49192315 enh52526 49198226 5911
Liver (HepG2) Large Intestine Liver Thyroid Lung (PC-9) Pancreas Uterus Stomach
chr17 49182545 49182921 vista25137 49198226 15305
VISTA
chr17 49196679 49197214 vista25138 49198226 1012
VISTA
chr17 49200610 49212675 enh17225 49198226 2384
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Placenta Colon (HCT116) Lung (PC-9) Stomach
chr17 49205476 49205735 vista25139 49198226 7250
VISTA
chr17 49210436 49210615 vista25140 49198226 12210
VISTA
chr17 49215345 49219495 enh52527 49198226 17119
Large Intestine
chr17 49259405 49267975 enh107316 49198226 61179
Brain (SK-N-SH) Lung
chr17 49273865 49278015 enh48043 49198226 75639
Thymus
Transcript facotrs that regulate SPAG9[ENSG00000008294.16]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 49196640 49197144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 1082 108272066
chr17 49196657 49196901 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 1325 108272067
chr17 49196680 49196695 LEF1 JASPAR yes 49198226 1531 21255411
chr17 49196681 49196695 TCF7L2 JASPAR yes 49198226 1531 21255412
chr17 49196683 49196690 TCF4 TRANSFAC yes 49198226 1536 21255413
chr17 49196684 49196690 LEF1 TRANSFAC yes 49198226 1536 21255414
chr17 49196684 49196690 TCF4 TRANSFAC yes 49198226 1536 21255415
chr17 49196698 49196702 YY1 TRANSFAC yes 49198226 1524 21255416
chr17 49196704 49196713 SNAI2 JASPAR yes 49198226 1513 21255417
chr17 49196704 49196714 ID4 JASPAR yes 49198226 1512 21255418
chr17 49196704 49196714 NHLH1 JASPAR yes 49198226 1512 21255419
chr17 49196704 49196714 TCF3 JASPAR yes 49198226 1512 21255420
chr17 49196704 49196714 TCF4 JASPAR yes 49198226 1512 21255421
chr17 49196704 49197360 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 866 108272068
chr17 49196705 49196726 REST JASPAR yes 49198226 1500 21255422
chr17 49196706 49196715 ZEB1 JASPAR yes 49198226 1511 21255423
chr17 49196712 49197222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 1004 108272069
chr17 49196726 49196741 MEF2C JASPAR yes 49198226 1485 21255424
chr17 49196727 49196742 MEF2A JASPAR yes 49198226 1484 21255425
chr17 49196736 49196750 XBP1 JASPAR yes 49198226 1476 21255426
chr17 49196746 49196751 USF2 TRANSFAC yes 49198226 1475 21255427
chr17 49196752 49196759 TCF4 TRANSFAC yes 49198226 1467 21255428
chr17 49196753 49196759 LEF1 TRANSFAC yes 49198226 1467 21255429
chr17 49196753 49196759 TCF4 TRANSFAC yes 49198226 1467 21255430
chr17 49196756 49196762 GATA1 TRANSFAC yes 49198226 1464 21255431
chr17 49196756 49196764 GATA5 JASPAR yes 49198226 1462 21255432
chr17 49196762 49196766 H4TF2 TRANSFAC yes 49198226 1460 21255433
chr17 49196774 49196777 MYB TRANSFAC yes 49198226 1449 21255434
chr17 49196788 49196803 IRF9 JASPAR yes 49198226 1423 21255435
chr17 49196789 49196803 IRF7 JASPAR yes 49198226 1423 21255436
chr17 49196789 49196803 IRF8 JASPAR yes 49198226 1423 21255437
chr17 49196807 49197247 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 49198226 979 108272070
chr17 49196812 49197348 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 49198226 878 108272071
chr17 49196818 49197254 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 49198226 972 108272072
chr17 49196830 49196834 NFE TRANSFAC yes 49198226 1392 21255438
chr17 49196851 49197274 REST UCSC Txn Factor no Conserved 49198226 952 108272073
chr17 49196858 49197182 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 49198226 1044 108272074
chr17 49196866 49197190 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49198226 1036 108272075
chr17 49196870 49196888 ESR1 JASPAR yes 49198226 1338 21255439
chr17 49196872 49196892 ESR1 JASPAR yes 49198226 1334 21255440
chr17 49196880 49197267 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 959 108272076
chr17 49196880 49197274 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 952 108272077
chr17 49196880 49197400 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49198226 826 108272078
chr17 49196883 49196894 ESRRA JASPAR yes 49198226 1332 21255441
chr17 49196887 49196891 ESR1 TRANSFAC yes 49198226 1335 21255442
chr17 49196900 49197160 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 1066 108272079
chr17 49196907 49196922 SCRT1 JASPAR yes 49198226 1304 21255443
chr17 49196908 49197564 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 662 108272080
chr17 49196910 49196913 MYB TRANSFAC yes 49198226 1313 21255444
chr17 49196911 49196920 SNAI2 JASPAR yes 49198226 1306 21255445
chr17 49196911 49196921 FIGLA JASPAR yes 49198226 1305 21255446
chr17 49196911 49196921 MSC JASPAR yes 49198226 1305 21255447
chr17 49196913 49197157 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 1069 108272081
chr17 49196921 49197172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 1054 108272082
chr17 49196924 49197165 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 49198226 1061 108272083
chr17 49196930 49196941 FOXP2 JASPAR yes 49198226 1285 21255448
chr17 49196931 49196935 TEAD2 TRANSFAC yes 49198226 1291 21255449
chr17 49196931 49196936 TBP TRANSFAC yes 49198226 1290 21255450
chr17 49196935 49196945 MYF6 JASPAR yes 49198226 1281 21255451
chr17 49196937 49197180 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49198226 1046 108272084
chr17 49196943 49197134 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 1092 108272085
chr17 49196948 49197170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 49198226 1056 108272086
chr17 49196949 49196954 ETS2 TRANSFAC yes 49198226 1272 21255452
chr17 49196949 49197166 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49198226 1060 108272087
chr17 49196951 49196961 RELA JASPAR yes 49198226 1265 21255453
chr17 49196960 49196970 NFATC3 JASPAR yes 49198226 1256 21255454
chr17 49196962 49196968 ETS1 JASPAR yes 49198226 1258 21255455
chr17 49196972 49196981 NFIX JASPAR yes 49198226 1245 21255456
chr17 49196972 49196982 NFIA JASPAR yes 49198226 1244 21255457
chr17 49196974 49196980 NFIC JASPAR yes 49198226 1246 21255458
chr17 49196974 49196986 PKNOX1 JASPAR yes 49198226 1240 21255459
chr17 49196974 49196986 PKNOX2 JASPAR yes 49198226 1240 21255460
chr17 49196974 49196986 TGIF1 JASPAR yes 49198226 1240 21255461
chr17 49196974 49196986 TGIF2 JASPAR yes 49198226 1240 21255462
chr17 49196980 49196984 NFE TRANSFAC yes 49198226 1242 21255463
chr17 49196980 49197114 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 49198226 1112 108272088
chr17 49196986 49197526 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 700 108272089
chr17 49197000 49197008 SP1 TRANSFAC yes 49198226 1218 21255464
chr17 49197000 49197010 SP1 JASPAR yes 49198226 1216 21255465
chr17 49197001 49197007 SP1 TRANSFAC yes 49198226 1219 21255466
chr17 49197001 49197011 SP1 JASPAR yes 49198226 1215 21255467
chr17 49197002 49197009 SP1 TRANSFAC yes 49198226 1217 21255468
chr17 49197003 49197008 SP1 TRANSFAC yes 49198226 1218 21255469
chr17 49197003 49197009 SP1 TRANSFAC yes 49198226 1217 21255470
chr17 49197003 49197010 SP1 TRANSFAC yes 49198226 1216 21255471
chr17 49197003 49197072 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 1154 108272090
chr17 49197010 49197014 H1TF2 TRANSFAC yes 49198226 1212 21255472
chr17 49197010 49197014 NFE TRANSFAC yes 49198226 1212 21255473
chr17 49197010 49197014 SRF TRANSFAC yes 49198226 1212 21255474
chr17 49197016 49197483 CTCF UCSC Txn Factor no Conserved 49198226 743 108272091
chr17 49197017 49197032 MEF2C JASPAR yes 49198226 1194 21255475
chr17 49197018 49197033 MEF2A JASPAR yes 49198226 1193 21255476
chr17 49197019 49197030 FOXB1 JASPAR yes 49198226 1196 21255477
chr17 49197019 49197030 FOXC1 JASPAR yes 49198226 1196 21255478
chr17 49197019 49197031 FOXC2 JASPAR yes 49198226 1195 21255479
chr17 49197019 49197031 MEF2A JASPAR yes 49198226 1195 21255480
chr17 49197019 49197031 MEF2B JASPAR yes 49198226 1195 21255481
chr17 49197019 49197031 MEF2D JASPAR yes 49198226 1195 21255482
chr17 49197020 49197030 MEF2A JASPAR yes 49198226 1196 21255483
chr17 49197021 49197025 TEAD2 TRANSFAC yes 49198226 1201 21255484
chr17 49197021 49197026 TBP TRANSFAC yes 49198226 1200 21255485
chr17 49197021 49197027 TMF TRANSFAC yes 49198226 1199 21255486
chr17 49197047 49197068 REST JASPAR yes 49198226 1158 21255487
chr17 49197051 49197055 NFE TRANSFAC yes 49198226 1171 21255488
chr17 49197055 49197066 ESRRB JASPAR yes 49198226 1160 21255489
chr17 49197067 49197471 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49198226 755 108272092
chr17 49197071 49197507 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 719 108272093
chr17 49197074 49197086 TEAD1 JASPAR yes 49198226 1140 21255490
chr17 49197074 49197398 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 828 108272094
chr17 49197075 49197081 PEA3 TRANSFAC yes 49198226 1145 21255491
chr17 49197076 49197086 TEAD1 JASPAR yes 49198226 1140 21255492
chr17 49197076 49197086 TEAD4 JASPAR yes 49198226 1140 21255493
chr17 49197077 49197085 TEAD3 JASPAR yes 49198226 1141 21255494
chr17 49197094 49197099 GATA2 JASPAR yes 49198226 1127 21255495
chr17 49197098 49197113 SOX21 JASPAR yes 49198226 1113 21255496
chr17 49197098 49197114 SOX4 JASPAR yes 49198226 1112 21255497
chr17 49197098 49197388 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 49198226 838 108272095
chr17 49197101 49197371 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 855 108272096
chr17 49197105 49197120 FOXA1 JASPAR yes 49198226 1106 21255498
chr17 49197106 49197118 FOXI1 JASPAR yes 49198226 1108 21255499
chr17 49197106 49197121 FOXP1 JASPAR yes 49198226 1105 21255500
chr17 49197107 49197116 SRY JASPAR yes 49198226 1110 21255501
chr17 49197107 49197118 FOXP2 JASPAR yes 49198226 1108 21255502
chr17 49197107 49197119 FOXC2 JASPAR yes 49198226 1107 21255503
chr17 49197108 49197116 FOXG1 JASPAR yes 49198226 1110 21255504
chr17 49197108 49197116 FOXO3 JASPAR yes 49198226 1110 21255505
chr17 49197108 49197119 FOXB1 JASPAR yes 49198226 1107 21255506
chr17 49197108 49197119 FOXC1 JASPAR yes 49198226 1107 21255507
chr17 49197109 49197120 FOXA1 JASPAR yes 49198226 1106 21255508
chr17 49197114 49197126 FOXI1 JASPAR yes 49198226 1100 21255509
chr17 49197116 49197376 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49198226 850 108272097
chr17 49197117 49197121 YY1 TRANSFAC yes 49198226 1105 21255510
chr17 49197118 49197348 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 878 108272098
chr17 49197118 49197414 RAD21 UCSC Txn Factor no Conserved 49198226 812 108272099
chr17 49197122 49197578 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 648 108272100
chr17 49197124 49197480 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 49198226 746 108272101
chr17 49197126 49197356 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 870 108272102
chr17 49197131 49197375 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49198226 851 108272103
chr17 49197138 49197402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49198226 824 108272104
chr17 49197143 49197413 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 49198226 813 108272105
chr17 49197154 49197160 SOX10 JASPAR yes 49198226 1066 21255511
chr17 49197155 49197345 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 49198226 881 108272106
chr17 49197156 49197167 TBX2 JASPAR yes 49198226 1059 21255512
chr17 49197156 49198167 ZNF143 GTRD no Epithelial (MCF-7) 49198226 59 108272107
chr17 49197163 49197984 ZNF274 GTRD no Bone Marrow (K562) 49198226 242 108272108
chr17 49197165 49198543 ZBTB33 GTRD no Lung (A549) 49198226 317 108272109
chr17 49197167 49197383 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 49198226 843 108272110
chr17 49197167 49198033 ZBTB33 GTRD no Lung (A549) 49198226 193 108272111
chr17 49197171 49197831 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 49198226 395 108272112
chr17 49197173 49197337 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 49198226 889 108272113
chr17 49197173 49197768 ZNF274 GTRD no Bone Marrow (K562) 49198226 458 108272114
chr17 49197175 49197551 ZNF143 GTRD no Epithelial (MCF-7) 49198226 675 108272115
chr17 49197178 49197602 ZNF143 GTRD no Epithelial (MCF-7) 49198226 624 108272116
chr17 49197182 49197358 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 868 108272117
chr17 49197188 49197200 PROX1 JASPAR yes 49198226 1026 21255513
chr17 49197189 49197739 ZNF274 GTRD no Cervix (HeLa-S3) 49198226 487 108272118
chr17 49197193 49197323 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 903 108272119
chr17 49197204 49197785 ZNF274 GTRD no Cervix (HeLa-S3) 49198226 441 108272120
chr17 49197206 49197727 ZNF274 GTRD no Cervix (HeLa-S3) 49198226 499 108272121
chr17 49200385 49200833 TCF7L2 GTRD no Colon (HCT116) 49198226 2159 21772016
chr17 49202823 49203103 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 4597 21772017
chr17 49202846 49203076 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 4620 21772018
chr17 49202877 49203001 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 49198226 4651 21772019
chr17 49202911 49202988 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 49198226 4685 21772020
SNPs associated with SPAG9[ENSG00000008294.16], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 48929503 rs3922591 A C 110032 Pancreas 0.038233 4926203
chr17 49455031 rs796886431 GA G 256805 Spleen 0.149822 4929601
chr17 48582276 rs11649849 G A 457259 Liver 0.344014 4923788
chr17 49066055 rs9898653 T C 0 Adrenal 6.20628e-05 4927565
Details of SPAG9[ENSG00000008294.16]
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Genomic Location chr17:49039535-49198226[-]
TSS 49198226
Gene Name SPAG9
Ensembl ID ENSG00000008294.16
ENTREZID 9043
Uniprot
Q5JB53
O60271
Protein Name
C-Jun-amino-terminal kinase-interacting protein 4
Sperm associated antigen 9 variant 5
Expression levels of SPAG9[ENSG00000008294.16]
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