EnhancerDB
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Enhancers that regulate RANBP9[ENSG00000010017.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 13628065 13632215 enh8966 13711796 79581
Blood (Karpas-422)
chr6 13630387 13630831 vista50965 13711796 80965
VISTA
chr6 13636617 13636971 vista50966 13711796 74825
VISTA
chr6 13647185 13651375 enh97825 13711796 60421
Lung (PC-9) Epithelial (MCF-7)
chr6 13649579 13649948 vista50967 13711796 61848
VISTA
chr6 13651430 13651585 vista50968 13711796 60211
VISTA
chr6 13662469 13662838 vista50969 13711796 48958
VISTA
chr6 13663005 13684135 enh23044 13711796 27661
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Stomach Placenta Peripheral Blood (MM.1S) Pancreas Spleen Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr6 13671877 13672171 vista50970 13711796 39625
VISTA
chr6 13685445 13692335 enh91661 13711796 19461
Bone Marrow (K562) Blood (T-cell)
chr6 13701105 13705255 enh91662 13711796 6541
Bone Marrow (K562)
chr6 13709903 13710182 vista50971 13711796 1614
VISTA
chr6 13712805 13713056 vista50972 13711796 1009
VISTA
chr6 13721458 13739115 enh23045 13711796 9662
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Placenta Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Epithelial (MCF-7)
chr6 13745925 13750135 enh108053 13711796 34129
Blood (T-cell)
chr6 13758685 13770250 enh23046 13711796 46889
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Muscle (Myotube) Uterus Stomach
chr6 13762938 13763200 vista50973 13711796 51142
VISTA
chr6 13766479 13766874 vista50974 13711796 54683
VISTA
chr6 13773785 13779295 enh23047 13711796 61989
Placenta
chr6 13793425 13797915 enh23048 13711796 81629
Placenta Uterus
chr6 13808625 13813554 enh100461 13711796 96829
Uterus Brain (SK-N-SH)
chr6 13811144 13811203 vista50975 13711796 99348
VISTA
Transcript facotrs that regulate RANBP9[ENSG00000010017.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 13709912 13709925 HSF1 JASPAR yes 13711796 1871 70316725
chr6 13709925 13709940 MEF2A JASPAR yes 13711796 1856 70316726
chr6 13709926 13709941 MEF2C JASPAR yes 13711796 1855 70316727
chr6 13709929 13709933 YY1 TRANSFAC yes 13711796 1863 70316728
chr6 13709946 13709960 E2F7 JASPAR yes 13711796 1836 70316729
chr6 13709960 13709964 YY1 TRANSFAC yes 13711796 1832 70316730
chr6 13709969 13709974 H4TF1 TRANSFAC yes 13711796 1822 70316731
chr6 13709992 13710008 POU4F2 JASPAR yes 13711796 1788 70316732
chr6 13709994 13710009 HNF1A JASPAR yes 13711796 1787 70316733
chr6 13709995 13710007 HNF1B JASPAR yes 13711796 1789 70316734
chr6 13709995 13710008 HNF1B JASPAR yes 13711796 1788 70316735
chr6 13710004 13710007 MYB TRANSFAC yes 13711796 1789 70316736
chr6 13710004 13710015 PROP1 JASPAR yes 13711796 1781 70316737
chr6 13710008 13710015 NKX3-1 JASPAR yes 13711796 1781 70316738
chr6 13710037 13710053 SRF JASPAR yes 13711796 1743 70316739
chr6 13710043 13710047 TEAD2 TRANSFAC yes 13711796 1749 70316740
chr6 13710058 13710061 MYB TRANSFAC yes 13711796 1735 70316741
chr6 13710058 13710067 RUNX2 JASPAR yes 13711796 1729 70316742
chr6 13710058 13710068 RUNX3 JASPAR yes 13711796 1728 70316743
chr6 13710058 13710069 RUNX1 JASPAR yes 13711796 1727 70316744
chr6 13710067 13710079 FOXI1 JASPAR yes 13711796 1717 70316745
chr6 13710067 13710081 GATA2 JASPAR yes 13711796 1715 70316746
chr6 13710067 13710082 FOXP1 JASPAR yes 13711796 1714 70316747
chr6 13710068 13710079 FOXP2 JASPAR yes 13711796 1717 70316748
chr6 13710069 13710077 FOXG1 JASPAR yes 13711796 1719 70316749
chr6 13710069 13710077 FOXO3 JASPAR yes 13711796 1719 70316750
chr6 13710071 13710079 GATA3 JASPAR yes 13711796 1717 70316751
chr6 13710118 13710134 NFYA JASPAR yes 13711796 1662 70316752
chr6 13710119 13710137 NFYA JASPAR yes 13711796 1659 70316753
chr6 13710123 13710127 H1TF2 TRANSFAC yes 13711796 1669 70316754
chr6 13710123 13710127 NFE TRANSFAC yes 13711796 1669 70316755
chr6 13710123 13710127 SRF TRANSFAC yes 13711796 1669 70316756
chr6 13710154 13710168 SPI1 JASPAR yes 13711796 1628 70316757
chr6 13710156 13710176 RREB1 JASPAR yes 13711796 1620 70316758
chr6 13710172 13710177 SP1 TRANSFAC yes 13711796 1619 70316759
chr6 13710899 13712912 POLR2A UCSC Txn Factor no Conserved 13711796 897 108538609
chr6 13712816 13712830 BATF3 JASPAR yes 13711796 1020 70316760
chr6 13712819 13712827 CREB1 JASPAR yes 13711796 1023 70316761
chr6 13712821 13712826 ATF1 TRANSFAC yes 13711796 1025 70316762
chr6 13712830 13712834 YY1 TRANSFAC yes 13711796 1034 70316763
chr6 13712840 13712851 HOXC11 JASPAR yes 13711796 1044 70316764
chr6 13712840 13712851 HOXC13 JASPAR yes 13711796 1044 70316765
chr6 13712840 13712851 HOXD12 JASPAR yes 13711796 1044 70316766
chr6 13712845 13712858 POU2F2 JASPAR yes 13711796 1049 70316767
chr6 13712845 13712859 POU1F1 JASPAR yes 13711796 1049 70316768
chr6 13712846 13712858 POU3F1 JASPAR yes 13711796 1050 70316769
chr6 13712846 13712858 POU3F2 JASPAR yes 13711796 1050 70316770
chr6 13712846 13712859 POU3F3 JASPAR yes 13711796 1050 70316771
chr6 13712847 13712859 POU2F1 JASPAR yes 13711796 1051 70316772
chr6 13712855 13712858 MYB TRANSFAC yes 13711796 1059 70316773
chr6 13712871 13712874 MYB TRANSFAC yes 13711796 1075 70316774
chr6 13712888 13712892 YY1 TRANSFAC yes 13711796 1092 70316775
chr6 13712897 13712909 EHF JASPAR yes 13711796 1101 70316776
chr6 13712897 13712910 ELF3 JASPAR yes 13711796 1101 70316777
chr6 13712898 13712909 ELF5 JASPAR yes 13711796 1102 70316778
chr6 13712900 13712905 ETS2 TRANSFAC yes 13711796 1104 70316779
chr6 13712900 13712908 FEV JASPAR yes 13711796 1104 70316780
chr6 13712905 13712919 FOXF2 JASPAR yes 13711796 1109 70316781
chr6 13712907 13712911 YY1 TRANSFAC yes 13711796 1111 70316782
chr6 13712925 13712940 MEF2C JASPAR yes 13711796 1129 70316783
chr6 13712926 13712941 MEF2A JASPAR yes 13711796 1130 70316784
chr6 13712928 13712938 MEF2A JASPAR yes 13711796 1132 70316785
chr6 13712929 13713149 SPI1 UCSC Txn Factor no Conserved 13711796 1133 108538610
chr6 13712939 13712946 SPI1 JASPAR yes 13711796 1143 70316786
chr6 13712958 13712962 H1TF2 TRANSFAC yes 13711796 1162 70316787
chr6 13712958 13712962 NFE TRANSFAC yes 13711796 1162 70316788
chr6 13712958 13712962 SRF TRANSFAC yes 13711796 1162 70316789
chr6 13712958 13712964 NFYC TRANSFAC yes 13711796 1162 70316790
chr6 13712981 13712991 NFIA JASPAR yes 13711796 1185 70316791
chr6 13712982 13712991 NFIX JASPAR yes 13711796 1186 70316792
chr6 13712983 13712989 NFIC JASPAR yes 13711796 1187 70316793
chr6 13712992 13713001 NFIX JASPAR yes 13711796 1196 70316794
chr6 13712992 13713002 NFIA JASPAR yes 13711796 1196 70316795
chr6 13712994 13713000 NFIC JASPAR yes 13711796 1198 70316796
chr6 13713004 13713019 NR2C2 JASPAR yes 13711796 1208 70316797
chr6 13713009 13713026 ZNF410 JASPAR yes 13711796 1213 70316798
chr6 13713010 13713021 FOSL2 JASPAR yes 13711796 1214 70316799
chr6 13713021 13713024 MYB TRANSFAC yes 13711796 1225 70316800
chr6 13713024 13713028 YY1 TRANSFAC yes 13711796 1228 70316801
chr6 13713032 13713038 LEF1 TRANSFAC yes 13711796 1236 70316802
chr6 13713032 13713038 SOX10 JASPAR yes 13711796 1236 70316803
chr6 13713032 13713047 FOXP1 JASPAR yes 13711796 1236 70316804
chr6 13713033 13713042 SRY JASPAR yes 13711796 1237 70316805
chr6 13713033 13713044 FOXP2 JASPAR yes 13711796 1237 70316806
chr6 13713035 13713043 FOXO3 JASPAR yes 13711796 1239 70316807
SNPs associated with RANBP9[ENSG00000010017.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 13715997 rs424001 C T 4201 Esophagus 8.78484e-05 8846431
chr6 14004071 rs147258920 C G,T 292275 Heart 0.317969 8848493
chr6 14259968 rs116425897 C T 548172 Pancreas 0.282207 8850597
chr6 13069381 rs114931793 A G 552349 Spleen 0.0318771 8841872
chr6 14379472 rs72822643 C T 667676 Thyroid 0.114558 8851960
chr6 13451287 rs77343626 T C 170443 Liver 0.0884433 8844580
chr6 13760067 rs140326332 GC G 48271 Lung 0.0752974 8846756
chr6 14695426 rs200201301 C CTTGTT 983630 Stomach 0.300416 8854840
chr6 14654675 rs73370124 G A 942879 Adrenal 0.249092 8854405
Details of RANBP9[ENSG00000010017.9]
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Genomic Location chr6:13621730-13711796[-]
TSS 13711796
Gene Name RANBP9
Ensembl ID ENSG00000010017.9
ENTREZID 10048
Uniprot
Q96S59
A0A024QZW3
Protein Name
isoform CRA_a
isoform CRA_b
Importin-9
RAN binding protein 9
RAN binding protein 9
Ran-binding protein 9
Expression levels of RANBP9[ENSG00000010017.9]
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