EnhancerDB
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Enhancers that regulate CBX5[ENSG00000094916.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 54587567 54593723 enh2375 54673886 80163
Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Epithelial (MCF-7)
chr12 54589708 54589846 vista13564 54673886 84040
VISTA
chr12 54604917 54618893 enh2376 54673886 54993
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus
chr12 54610103 54610277 vista13565 54673886 63609
VISTA
chr12 54610828 54611089 vista13566 54673886 62797
VISTA
chr12 54611719 54612027 vista13567 54673886 61859
VISTA
chr12 54620405 54624555 enh98970 54673886 49331
Uterus Stomach
chr12 54649185 54662915 enh2377 54673886 10971
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
chr12 54686065 54690215 enh110766 54673886 12179
Cervix (HeLa-S3)
chr12 54690191 54690205 vista13568 54673886 16305
VISTA
chr12 54698103 54698502 vista13569 54673886 24217
VISTA
chr12 54700865 54701198 vista13570 54673886 26979
VISTA
chr12 54717605 54726952 enh57604 54673886 43719
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Lung (A549) Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Blood (T-cell) Stomach
chr12 54727062 54734275 enh47585 54673886 53176
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Stomach Muscle (A673) Colon (HCT116) Adrenal Pancreas Uterus Thymus Heart
chr12 54745877 54746035 vista13571 54673886 71991
VISTA
chr12 54746110 54746353 vista13572 54673886 72224
VISTA
chr12 54746696 54746816 vista13573 54673886 72810
VISTA
chr12 54746942 54756928 enh2378 54673886 73056
Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr12 54749329 54749578 vista13574 54673886 75443
VISTA
chr12 54752421 54752649 vista13575 54673886 78535
VISTA
chr12 54752671 54753884 vista13576 54673886 78785
VISTA
chr12 54754477 54754933 vista13577 54673886 80591
VISTA
chr12 54760525 54766295 enh110767 54673886 86639
Cervix (HeLa-S3)
chr12 54768425 54772655 enh14747 54673886 94539
Placenta Uterus
chr12 54770417 54770796 vista13578 54673886 96531
VISTA
Transcript facotrs that regulate CBX5[ENSG00000094916.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with CBX5[ENSG00000094916.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 54626772 rs150926693 C CTT 0 Esophagus 0.110537 2651364
chr12 55353687 rs2256870 C T 679801 Esophagus 0.397119 2654668
chr12 54593953 rs17108995 G A 30771 Heart 0.305659 2651078
chr12 54477797 rs4759328 A G 146927 Heart 0.268728 2650462
chr12 54424123 rs7308105 T C 200601 Pancreas 0.228115 2650064
chr12 55141990 rs266671 T C 468104 Ovary 0.291204 2653864
chr12 54329516 rs55733428 G A 295208 Uterus 0.728169 2649137
chr12 54768662 rs1869884 G A 94776 Thyroid 0.239538 2652082
chr12 54838072 rs114199503 C G 164186 Adrenal 0.140399 2652564
Details of CBX5[ENSG00000094916.9]
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Genomic Location chr12:54624724-54673886[-]
TSS 54673886
Gene Name CBX5
Ensembl ID ENSG00000094916.9
ENTREZID 23468
Uniprot
V9HWG0
P45973
Protein Name
CBX5 protein
Chromobox homolog 5
Chromobox protein homolog 5
Expression levels of CBX5[ENSG00000094916.9]
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