EnhancerDB
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Enhancers that regulate MTHFSD[ENSG00000103248.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 86486845 86503395 enh31990 86588841 85446
Astrocyte Cervix (HeLa-S3) Large Intestine Stomach
chr16 86499961 86500190 vista23393 86588841 88651
VISTA
chr16 86508845 86515335 enh16892 86588841 73506
Placenta Cervix (HeLa-S3) Stomach
chr16 86523025 86527175 enh109738 86588841 61666
Stomach
chr16 86532148 86532503 vista23394 86588841 56338
VISTA
chr16 86541340 86541581 vista23395 86588841 47260
VISTA
chr16 86549385 86555939 enh16893 86588841 32902
Esophagus Cervix (HeLa-S3) Placenta Pancreas
chr16 86587305 86587716 vista23396 86588841 1125
VISTA
chr16 86605943 86606044 vista23397 86588841 17102
VISTA
chr16 86606085 86610269 enh102550 86588841 17244
Bone (Osteoblast)
chr16 86609499 86609840 vista23398 86588841 20658
VISTA
chr16 86615965 86626395 enh31991 86588841 27124
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (Myoblast) Epithelial (MCF-7)
chr16 86619952 86620235 vista23399 86588841 31111
VISTA
chr16 86626425 86634395 enh31992 86588841 37584
Astrocyte
chr16 86639865 86655285 enh31993 86588841 51024
Large Intestine Astrocyte Bone (Osteoblast) Lung Pancreas (Panc1) Uterus Pancreas Spleen Neural Stem Cells (H9) Heart
chr16 86653031 86653193 vista23400 86588841 64190
VISTA
chr16 86658765 86671055 enh31994 86588841 69924
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Muscle (A673) Muscle (Myotube) Epithelial (MCF-7)
chr16 86664163 86664323 vista23401 86588841 75322
VISTA
chr16 86685005 86689677 enh31995 86588841 96164
Astrocyte Muscle (Myotube) Bone (Osteoblast) Heart
Transcript facotrs that regulate MTHFSD[ENSG00000103248.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 86587309 86587328 CTCF JASPAR yes 86588841 1513 49412460
chr16 86587313 86587319 YY1 JASPAR yes 86588841 1522 49412461
chr16 86587316 86587322 ZNF354C JASPAR yes 86588841 1519 49412462
chr16 86587338 86587348 GCM2 JASPAR yes 86588841 1493 49412463
chr16 86587338 86587349 GCM1 JASPAR yes 86588841 1492 49412464
chr16 86587368 86587387 CTCF JASPAR yes 86588841 1454 49412465
chr16 86587372 86587382 TCF3 JASPAR yes 86588841 1459 49412466
chr16 86587373 86587382 SNAI2 JASPAR yes 86588841 1459 49412467
chr16 86587374 86587379 USF2 TRANSFAC yes 86588841 1462 49412468
chr16 86587384 86588134 POLR2A UCSC Txn Factor no Conserved 86588841 707 108218360
chr16 86587386 86587762 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 86588841 1079 108218361
chr16 86587402 86587416 BATF3 JASPAR yes 86588841 1425 49412469
chr16 86587409 86587419 TFAP4 JASPAR yes 86588841 1422 49412470
chr16 86587425 86587445 TP63 JASPAR yes 86588841 1396 49412471
chr16 86587430 86587435 SP1 TRANSFAC yes 86588841 1406 49412472
chr16 86587432 86587437 TFAP2A TRANSFAC yes 86588841 1404 49412473
chr16 86587432 86587438 MZF1 JASPAR yes 86588841 1403 49412474
chr16 86587451 86587459 FOXL1 JASPAR yes 86588841 1382 49412475
chr16 86587465 86587480 FOXP1 JASPAR yes 86588841 1361 49412476
chr16 86587466 86587477 FOXA1 JASPAR yes 86588841 1364 49412477
chr16 86587466 86587790 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 86588841 1051 108218362
chr16 86587467 86587787 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 86588841 1054 108218363
chr16 86587468 86587479 FOXP2 JASPAR yes 86588841 1362 49412478
chr16 86587469 86587477 FOXO3 JASPAR yes 86588841 1364 49412479
chr16 86587470 86587477 FOXD2 JASPAR yes 86588841 1364 49412480
chr16 86587470 86587477 FOXI1 JASPAR yes 86588841 1364 49412481
chr16 86587470 86587477 FOXL1 JASPAR yes 86588841 1364 49412482
chr16 86587470 86587477 FOXO4 JASPAR yes 86588841 1364 49412483
chr16 86587470 86587477 FOXO6 JASPAR yes 86588841 1364 49412484
chr16 86587470 86587477 FOXP3 JASPAR yes 86588841 1364 49412485
chr16 86587470 86587478 FOXD1 JASPAR yes 86588841 1363 49412486
chr16 86587470 86587478 FOXG1 JASPAR yes 86588841 1363 49412487
chr16 86587470 86587478 FOXO3 JASPAR yes 86588841 1363 49412488
chr16 86587472 86587478 HiNF-A TRANSFAC yes 86588841 1363 49412489
chr16 86587472 86587487 NFYB JASPAR yes 86588841 1354 49412490
chr16 86587474 86587490 NFYA JASPAR yes 86588841 1351 49412491
chr16 86587474 86587745 ZNF274 GTRD no Bone Marrow (K562) 86588841 1096 108218364
chr16 86587475 86587493 NFYA JASPAR yes 86588841 1348 49412492
chr16 86587476 86587966 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 86588841 875 108218365
chr16 86587479 86587483 H1TF2 TRANSFAC yes 86588841 1358 49412493
chr16 86587479 86587483 NFE TRANSFAC yes 86588841 1358 49412494
chr16 86587479 86587483 SRF TRANSFAC yes 86588841 1358 49412495
chr16 86587479 86588003 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 86588841 838 108218366
chr16 86587489 86587813 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 86588841 1028 108218367
chr16 86587491 86587851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 86588841 990 108218368
chr16 86587493 86587763 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 86588841 1078 108218369
chr16 86587494 86587814 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 86588841 1027 108218370
chr16 86587513 86587528 NFYB JASPAR yes 86588841 1313 49412496
chr16 86587515 86587531 NFYA JASPAR yes 86588841 1310 49412497
chr16 86587516 86587534 NFYA JASPAR yes 86588841 1307 49412498
chr16 86587519 86587975 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 86588841 866 108218371
chr16 86587520 86587524 H1TF2 TRANSFAC yes 86588841 1317 49412499
chr16 86587520 86587524 NFE TRANSFAC yes 86588841 1317 49412500
chr16 86587520 86587524 SRF TRANSFAC yes 86588841 1317 49412501
chr16 86587525 86587529 LFA1 TRANSFAC yes 86588841 1312 49412502
chr16 86587528 86587992 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 86588841 849 108218372
chr16 86587532 86587908 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 86588841 933 108218373
chr16 86587544 86587844 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 86588841 997 108218374
chr16 86587551 86587556 TFAP2A TRANSFAC yes 86588841 1285 49412503
chr16 86587551 86587557 MZF1 JASPAR yes 86588841 1284 49412504
chr16 86587562 86587825 NFYB UCSC Txn Factor no Conserved 86588841 1016 108218375
chr16 86587562 86587825 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 86588841 1016 108218376
chr16 86587563 86587714 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 86588841 1127 108218377
chr16 86587568 86587924 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 86588841 917 108218378
chr16 86587578 86587926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 86588841 915 108218379
chr16 86587583 86587757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 86588841 1084 108218380
chr16 86587591 86587606 NFYB JASPAR yes 86588841 1235 49412505
chr16 86587593 86587609 NFYA JASPAR yes 86588841 1232 49412506
chr16 86587594 86587612 NFYA JASPAR yes 86588841 1229 49412507
chr16 86587595 86587941 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 86588841 900 108218381
chr16 86587596 86587769 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 86588841 1072 108218382
chr16 86587598 86587602 H1TF2 TRANSFAC yes 86588841 1239 49412508
chr16 86587598 86587602 NFE TRANSFAC yes 86588841 1239 49412509
chr16 86587598 86587602 SRF TRANSFAC yes 86588841 1239 49412510
chr16 86587609 86587617 MEIS2 JASPAR yes 86588841 1224 49412511
chr16 86587609 86587617 MEIS3 JASPAR yes 86588841 1224 49412512
chr16 86587610 86587614 NFE TRANSFAC yes 86588841 1227 49412513
chr16 86587610 86587617 MEIS1 JASPAR yes 86588841 1224 49412514
chr16 86587616 86587631 NFYB JASPAR yes 86588841 1210 49412515
chr16 86587618 86587634 NFYA JASPAR yes 86588841 1207 49412516
chr16 86587619 86587637 NFYA JASPAR yes 86588841 1204 49412517
chr16 86587623 86587627 H1TF2 TRANSFAC yes 86588841 1214 49412518
chr16 86587623 86587627 NFE TRANSFAC yes 86588841 1214 49412519
chr16 86587623 86587627 SRF TRANSFAC yes 86588841 1214 49412520
chr16 86587640 86587655 NFYB JASPAR yes 86588841 1186 49412521
chr16 86587642 86587658 NFYA JASPAR yes 86588841 1183 49412522
chr16 86587643 86587661 NFYA JASPAR yes 86588841 1180 49412523
chr16 86587645 86587663 MAFF JASPAR yes 86588841 1178 49412524
chr16 86587647 86587651 H1TF2 TRANSFAC yes 86588841 1190 49412525
chr16 86587647 86587651 NFE TRANSFAC yes 86588841 1190 49412526
chr16 86587647 86587651 SRF TRANSFAC yes 86588841 1190 49412527
chr16 86587653 86587664 SPDEF JASPAR yes 86588841 1177 49412528
chr16 86587654 86587665 FLI1 JASPAR yes 86588841 1176 49412529
chr16 86587655 86587662 PEA3 TRANSFAC yes 86588841 1179 49412530
chr16 86587658 86587668 GCM2 JASPAR yes 86588841 1173 49412531
chr16 86587661 86587671 SP1 JASPAR yes 86588841 1170 49412532
chr16 86587664 86587669 SP1 TRANSFAC yes 86588841 1172 49412533
chr16 86587667 86587672 SP1 TRANSFAC yes 86588841 1169 49412534
chr16 86587671 86587685 GATA2 JASPAR yes 86588841 1156 49412535
chr16 86587673 86587681 GATA3 JASPAR yes 86588841 1160 49412536
chr16 86587673 86587681 GATA5 JASPAR yes 86588841 1160 49412537
SNPs associated with MTHFSD[ENSG00000103248.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of MTHFSD[ENSG00000103248.13]
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Genomic Location chr16:86563782-86588841[-]
TSS 86588841
Gene Name MTHFSD
Ensembl ID ENSG00000103248.13
ENTREZID 64779
Uniprot
F5H0M7
Q2M296
B4DN17
Protein Name
Methenyltetrahydrofolate synthase domain-containing protein
Expression levels of MTHFSD[ENSG00000103248.13]
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