EnhancerDB
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Enhancers that regulate RAB3A[ENSG00000105649.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 18214987 18215493 vista28891 18314884 99391
VISTA
chr19 18221726 18232275 enh5045 18314884 82609
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Stomach Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
chr19 18230044 18230277 vista28892 18314884 84607
VISTA
chr19 18261345 18265895 enh99546 18314884 48989
Uterus
chr19 18264934 18265291 vista28893 18314884 49593
VISTA
chr19 18266025 18270215 enh5046 18314884 44669
Pancreas Uterus Blood (Karpas-422)
chr19 18282501 18282708 vista28894 18314884 32176
VISTA
chr19 18292405 18298627 enh69535 18314884 16257
Stomach Neural Stem Cells (H9) Epithelial (MCF-7)
chr19 18315989 18316123 vista28895 18314884 1105
VISTA
chr19 18330865 18335015 enh91218 18314884 15981
Bone Marrow (K562)
chr19 18336382 18342544 enh60754 18314884 21498
Blood (OCI-LY7)
chr19 18360705 18364855 enh109831 18314884 45821
Stomach
chr19 18365499 18365609 vista28896 18314884 50615
VISTA
chr19 18382556 18382948 vista28897 18314884 67672
VISTA
chr19 18386325 18390475 enh5047 18314884 71441
Blood (Karpas-422)
chr19 18393747 18393881 vista28898 18314884 78863
VISTA
chr19 18393965 18416709 enh5048 18314884 79081
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Uterus Adrenal Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
chr19 18395702 18395850 vista28899 18314884 80818
VISTA
chr19 18401020 18401539 vista28900 18314884 86136
VISTA
chr19 18402387 18403564 vista28901 18314884 87503
VISTA
chr19 18404099 18404539 vista28902 18314884 89215
VISTA
chr19 18405326 18405850 vista28903 18314884 90442
VISTA
chr19 18414244 18414595 vista28904 18314884 99360
VISTA
Transcript facotrs that regulate RAB3A[ENSG00000105649.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 18315059 18316341 ZNF143 GTRD no Epithelial (MCF-7) 18314884 175 108396495
chr19 18315061 18317179 ZNF274 GTRD no Blood (GM12878) 18314884 177 108396496
chr19 18315116 18317032 ZNF274 GTRD no Blood (GM12878) 18314884 232 108396497
chr19 18315349 18316019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 18314884 465 108396498
chr19 18315377 18316977 ZNF274 GTRD no Blood (GM12878) 18314884 493 108396499
chr19 18315390 18316605 ZNF274 GTRD no Liver (HepG2) 18314884 506 108396500
chr19 18315565 18316362 ZNF274 GTRD no Liver (HepG2) 18314884 681 108396501
chr19 18315580 18316542 ZNF274 GTRD no Blood (GM12878) 18314884 696 108396502
chr19 18315580 18316584 ZNF143 GTRD no Epithelial (MCF-7) 18314884 696 108396503
chr19 18315587 18316592 ZNF274 GTRD no Liver (HepG2) 18314884 703 108396504
chr19 18315600 18316064 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 18314884 716 108396505
chr19 18315612 18316076 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 18314884 728 108396506
chr19 18315628 18316559 ZNF143 GTRD no Epithelial (MCF-7) 18314884 744 108396507
chr19 18315634 18317024 ZNF274 GTRD no Liver (HepG2) 18314884 750 108396508
chr19 18315635 18316529 ZNF143 GTRD no Epithelial (MCF-7) 18314884 751 108396509
chr19 18315649 18316453 ZNF143 GTRD no Epithelial (MCF-7) 18314884 765 108396510
chr19 18315651 18316388 ZNF274 GTRD no Liver (HepG2) 18314884 767 108396511
chr19 18315651 18316484 TCF7L2 GTRD no Colon (HCT116) 18314884 767 108396512
chr19 18315657 18316387 ZNF143 GTRD no Epithelial (MCF-7) 18314884 773 108396513
chr19 18315664 18316724 ZNF274 GTRD no Blood (GM12878) 18314884 780 108396514
chr19 18315669 18316359 ZNF143 GTRD no Epithelial (MCF-7) 18314884 785 108396515
chr19 18315670 18316498 ZNF274 GTRD no Liver (HepG2) 18314884 786 108396516
chr19 18315671 18316322 ZNF274 GTRD no Liver (HepG2) 18314884 787 108396517
chr19 18315671 18316454 ZNF274 GTRD no Liver (HepG2) 18314884 787 108396518
chr19 18315672 18316672 ZNF274 GTRD no Blood (GM12878) 18314884 788 108396519
chr19 18315677 18316304 ZNF274 GTRD no Liver (HepG2) 18314884 793 108396520
chr19 18315689 18316485 ZNF274 GTRD no Liver (HepG2) 18314884 805 108396521
chr19 18315691 18316416 ZNF274 GTRD no Liver (HepG2) 18314884 807 108396522
chr19 18315695 18317031 ZNF274 GTRD no Blood (GM12878) 18314884 811 108396523
chr19 18315698 18316384 ZNF274 GTRD no Liver (HepG2) 18314884 814 108396524
chr19 18315710 18316927 ZNF143 GTRD no Epithelial (MCF-7) 18314884 826 108396525
chr19 18315711 18316325 ZNF143 GTRD no Epithelial (MCF-7) 18314884 827 108396526
chr19 18315717 18316476 ZNF274 GTRD no Liver (HepG2) 18314884 833 108396527
chr19 18315718 18316363 ZNF274 GTRD no Liver (HepG2) 18314884 834 108396528
chr19 18315720 18316359 ZNF274 GTRD no Liver (HepG2) 18314884 836 108396529
chr19 18315728 18316226 ZNF143 GTRD no Epithelial (MCF-7) 18314884 844 108396530
chr19 18315733 18316251 ZNF274 GTRD no Blood (GM12878) 18314884 849 108396531
chr19 18315734 18316510 ZNF274 GTRD no Blood (GM12878) 18314884 850 108396532
chr19 18315750 18316336 ZNF274 GTRD no Liver (HepG2) 18314884 866 108396533
chr19 18315770 18316746 ZNF274 GTRD no Blood (GM12878) 18314884 886 108396534
chr19 18315782 18316383 ZNF274 GTRD no Liver (HepG2) 18314884 898 108396535
chr19 18315789 18316521 ZNF143 GTRD no Epithelial (MCF-7) 18314884 905 108396536
chr19 18315791 18316415 ZNF274 GTRD no Blood (GM12878) 18314884 907 108396537
chr19 18315796 18316323 ZNF143 GTRD no Epithelial (MCF-7) 18314884 912 108396538
chr19 18315796 18316439 ZNF274 GTRD no Blood (GM12878) 18314884 912 108396539
chr19 18315797 18316382 ZNF274 GTRD no Liver (HepG2) 18314884 913 108396540
chr19 18315801 18316392 ZNF274 GTRD no Liver (HepG2) 18314884 917 108396541
chr19 18315808 18316370 ZNF274 GTRD no Liver (HepG2) 18314884 924 108396542
chr19 18315818 18316477 ZNF143 GTRD no Epithelial (MCF-7) 18314884 934 108396543
chr19 18315834 18316270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 18314884 950 108396544
chr19 18315835 18316347 ZNF274 GTRD no Liver (HepG2) 18314884 951 108396545
chr19 18315844 18316299 ZNF143 GTRD no Epithelial (MCF-7) 18314884 960 108396546
chr19 18315849 18316266 ZNF274 GTRD no Liver (HepG2) 18314884 965 108396547
chr19 18315855 18316215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 971 108396548
chr19 18315857 18316217 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 973 108396549
chr19 18315857 18316433 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 973 108396550
chr19 18315857 18316456 ZNF143 GTRD no Epithelial (MCF-7) 18314884 973 108396551
chr19 18315862 18316349 ZNF143 GTRD no Epithelial (MCF-7) 18314884 978 108396552
chr19 18315865 18316403 ZNF274 GTRD no Liver (HepG2) 18314884 981 108396553
chr19 18315869 18316554 ZNF274 GTRD no Liver (HepG2) 18314884 985 108396554
chr19 18315870 18316338 ZNF274 GTRD no Blood (GM12878) 18314884 986 108396555
chr19 18315875 18316438 ZNF143 GTRD no Epithelial (MCF-7) 18314884 991 108396556
chr19 18315877 18316381 ZNF143 GTRD no Epithelial (MCF-7) 18314884 993 108396557
chr19 18315886 18316275 ZNF274 GTRD no Liver (HepG2) 18314884 1002 108396558
chr19 18315893 18316457 ZNF274 GTRD no Blood (GM12878) 18314884 1009 108396559
chr19 18315895 18316340 ZNF143 GTRD no Epithelial (MCF-7) 18314884 1011 108396560
chr19 18315897 18316279 ZNF274 GTRD no Bone Marrow (K562) 18314884 1013 108396561
chr19 18315897 18316502 ZNF274 GTRD no Blood (GM12878) 18314884 1013 108396562
chr19 18315901 18316472 ZNF274 GTRD no Blood (GM12878) 18314884 1017 108396563
chr19 18315905 18316261 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 18314884 1021 108396564
chr19 18315906 18316512 ZNF143 GTRD no Epithelial (MCF-7) 18314884 1022 108396565
chr19 18315910 18316453 ZNF143 GTRD no Epithelial (MCF-7) 18314884 1026 108396566
chr19 18315910 18316576 ZNF274 GTRD no Blood (GM12878) 18314884 1026 108396567
chr19 18315911 18316287 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1027 108396568
chr19 18315912 18316585 ZNF274 GTRD no Blood (GM12878) 18314884 1028 108396569
chr19 18315918 18316238 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 18314884 1034 108396570
chr19 18315918 18316877 ZNF274 GTRD no Blood (GM12878) 18314884 1034 108396571
chr19 18315919 18316383 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 18314884 1035 108396572
chr19 18315922 18316378 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1038 108396573
chr19 18315923 18316486 ZNF143 GTRD no Epithelial (MCF-7) 18314884 1039 108396574
chr19 18315927 18316352 ZNF274 GTRD no Blood (GM12878) 18314884 1043 108396575
chr19 18315931 18316307 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 18314884 1047 108396576
chr19 18315931 18316388 ZNF274 GTRD no Blood (GM12878) 18314884 1047 108396577
chr19 18315934 18316430 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1050 108396578
chr19 18315935 18316328 ZNF274 GTRD no Liver (HepG2) 18314884 1051 108396579
chr19 18315938 18316337 ZNF274 GTRD no Liver (HepG2) 18314884 1054 108396580
chr19 18315939 18316219 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1055 108396581
chr19 18315943 18316323 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 18314884 1059 108396582
chr19 18315955 18316251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 18314884 1071 108396583
chr19 18315971 18316201 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1087 108396584
chr19 18315972 18316232 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 18314884 1088 108396585
chr19 18315976 18316502 ZNF274 GTRD no Blood (GM12878) 18314884 1092 108396586
chr19 18315979 18316465 ZNF274 GTRD no Blood (GM12878) 18314884 1095 108396587
chr19 18315979 18316525 ZNF274 GTRD no Blood (GM12878) 18314884 1095 108396588
chr19 18315991 18316005 GLIS2 JASPAR yes 18314884 1107 70820649
chr19 18315993 18316506 ZNF274 GTRD no Blood (GM12878) 18314884 1109 108396589
chr19 18315994 18316005 EBF1 JASPAR yes 18314884 1110 70820650
chr19 18315999 18316369 ZNF143 GTRD no Epithelial (MCF-7) 18314884 1115 108396590
chr19 18316002 18316328 ZNF143 GTRD no Epithelial (MCF-7) 18314884 1118 108396591
chr19 18316005 18316227 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 18314884 1121 108396592
chr19 18316008 18316130 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1124 108396593
chr19 18316015 18316499 ZNF274 GTRD no Blood (GM12878) 18314884 1131 108396594
chr19 18316022 18316032 ZNF740 JASPAR yes 18314884 1138 70820651
chr19 18316031 18316037 SP1 TRANSFAC yes 18314884 1147 70820652
chr19 18316031 18316041 SP1 JASPAR yes 18314884 1147 70820653
chr19 18316037 18316267 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1153 108396595
chr19 18316040 18316050 SP1 JASPAR yes 18314884 1156 70820654
chr19 18316042 18316047 SP1 TRANSFAC yes 18314884 1158 70820655
chr19 18316043 18316048 SP1 TRANSFAC yes 18314884 1159 70820656
chr19 18316043 18316049 SP1 TRANSFAC yes 18314884 1159 70820657
chr19 18316056 18316076 RREB1 JASPAR yes 18314884 1172 70820658
chr19 18316058 18316073 RUNX2 JASPAR yes 18314884 1174 70820659
chr19 18316062 18316494 ZNF143 GTRD no Epithelial (MCF-7) 18314884 1178 108396596
chr19 18316064 18316078 GLIS2 JASPAR yes 18314884 1180 70820660
chr19 18316064 18316304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 18314884 1180 108396597
chr19 18316065 18316560 ZNF274 GTRD no Blood (GM12878) 18314884 1181 108396598
chr19 18316066 18316187 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1182 108396599
chr19 18316066 18316331 ZNF274 GTRD no Liver (HepG2) 18314884 1182 108396600
chr19 18316067 18316072 SP1 TRANSFAC yes 18314884 1183 70820661
chr19 18316067 18316073 SP1 TRANSFAC yes 18314884 1183 70820662
chr19 18316074 18316546 ZNF274 GTRD no Blood (GM12878) 18314884 1190 108396601
chr19 18316084 18316095 FOXP2 JASPAR yes 18314884 1200 70820663
chr19 18316090 18316094 TEAD2 TRANSFAC yes 18314884 1206 70820664
chr19 18316090 18316095 TBP TRANSFAC yes 18314884 1206 70820665
chr19 18316090 18316096 TFIID TRANSFAC yes 18314884 1206 70820666
chr19 18316101 18316113 NHLH1 JASPAR yes 18314884 1217 70820667
chr19 18316102 18316112 NHLH1 JASPAR yes 18314884 1218 70820668
chr19 18316103 18316196 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18314884 1219 108396602
chr19 18316109 18316120 NRF1 JASPAR yes 18314884 1225 70820669
SNPs associated with RAB3A[ENSG00000105649.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of RAB3A[ENSG00000105649.5]
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Genomic Location chr19:18307594-18314884[-]
TSS 18314884
Gene Name RAB3A
Ensembl ID ENSG00000105649.5
ENTREZID 5864
Uniprot
P20336
A0A024R7I7
Protein Name
H.sapiens ras-related Hrab3A protein
Ras-related protein Rab-3A
Expression levels of RAB3A[ENSG00000105649.5]
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