EnhancerDB
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Enhancers that regulate HDAC5[ENSG00000108840.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 42101631 42102033 vista24865 42201070 99037
VISTA
chr17 42115729 42123816 enh32201 42201070 77254
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673)
chr17 42124945 42132655 enh44432 42201070 68415
Muscle (Myoblast) Muscle (Myotube) Heart
chr17 42158025 42162175 enh110894 42201070 38895
Cervix (HeLa-S3)
chr17 42170662 42193575 enh17179 42201070 7495
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 42173050 42173151 vista24866 42201070 27919
VISTA
chr17 42173326 42173627 vista24867 42201070 27443
VISTA
chr17 42174643 42174888 vista24868 42201070 26182
VISTA
chr17 42198947 42199210 vista24869 42201070 1860
VISTA
chr17 42203885 42213635 enh17180 42201070 2815
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Epithelial (MCF-7)
chr17 42215472 42215904 vista24870 42201070 14402
VISTA
chr17 42234945 42239095 enh91158 42201070 33875
Bone Marrow (K562)
chr17 42245888 42246083 vista24871 42201070 44818
VISTA
chr17 42276572 42276897 vista24872 42201070 75502
VISTA
chr17 42278333 42278607 vista24873 42201070 77263
VISTA
chr17 42291665 42297555 enh4420 42201070 90595
Uterus Blood (Karpas-422)
Transcript facotrs that regulate HDAC5[ENSG00000108840.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 42198419 42199983 ZNF274 GTRD no Blood (GM12878) 42201070 1087 108261993
chr17 42198468 42199852 ZNF274 GTRD no Blood (GM12878) 42201070 1218 108261994
chr17 42198771 42199327 ZNF274 GTRD no Blood (GM12878) 42201070 1743 108261995
chr17 42198781 42199272 ZNF274 GTRD no Blood (GM12878) 42201070 1798 108261996
chr17 42198782 42199373 ZNF274 GTRD no Bone Marrow (K562) 42201070 1697 108261997
chr17 42198798 42199369 ZNF274 GTRD no Blood (GM12878) 42201070 1701 108261998
chr17 42198830 42199194 ZNF274 GTRD no Blood (GM12878) 42201070 1876 108261999
chr17 42198834 42199201 ZNF274 GTRD no Blood (GM12878) 42201070 1869 108262000
chr17 42198846 42199330 ZNF274 GTRD no Bone Marrow (K562) 42201070 1740 108262001
chr17 42198858 42199277 ZNF274 GTRD no Bone Marrow (K562) 42201070 1793 108262002
chr17 42198874 42199214 ZNF274 GTRD no Bone Marrow (K562) 42201070 1856 108262003
chr17 42198874 42199271 ZNF274 GTRD no Blood (GM12878) 42201070 1799 108262004
chr17 42198915 42199952 ZNF274 GTRD no Bone Marrow (K562) 42201070 1118 108262005
chr17 42198929 42199929 ZNF274 GTRD no Bone Marrow (K562) 42201070 1141 108262006
chr17 42198930 42199235 CTCF GTRD no Spleen 42201070 1835 108262007
chr17 42198930 42199337 ZNF274 GTRD no Blood (GM12878) 42201070 1733 108262008
chr17 42198970 42198985 NR2C2 JASPAR yes 42201070 2085 21242552
chr17 42198971 42198981 SP1 TRANSFAC yes 42201070 2089 21242553
chr17 42198972 42198982 SP1 JASPAR yes 42201070 2088 21242554
chr17 42198973 42198979 SP1 TRANSFAC yes 42201070 2091 21242555
chr17 42198973 42198983 SP1 JASPAR yes 42201070 2087 21242556
chr17 42198975 42198985 ZNF740 JASPAR yes 42201070 2085 21242557
chr17 42198985 42198995 GCM2 JASPAR yes 42201070 2075 21242558
chr17 42198994 42199014 RREB1 JASPAR yes 42201070 2056 21242559
chr17 42199005 42199011 SP1 TRANSFAC yes 42201070 2059 21242560
chr17 42199005 42199015 SP1 JASPAR yes 42201070 2055 21242561
chr17 42199007 42199012 SP1 TRANSFAC yes 42201070 2058 21242562
chr17 42199028 42199032 YY1 TRANSFAC yes 42201070 2038 21242563
chr17 42199032 42199040 FOXO3 JASPAR yes 42201070 2030 21242564
chr17 42199035 42199041 HiNF-A TRANSFAC yes 42201070 2029 21242565
chr17 42199041 42199049 BARX1 JASPAR yes 42201070 2021 21242566
chr17 42199062 42199068 ETS1 JASPAR yes 42201070 2002 21242567
chr17 42199062 42199068 SPI1 JASPAR yes 42201070 2002 21242568
chr17 42199079 42199085 SOX10 JASPAR yes 42201070 1985 21242569
chr17 42199089 42200166 ZNF274 GTRD no Bone Marrow (K562) 42201070 904 108262009
chr17 42199093 42199113 RREB1 JASPAR yes 42201070 1957 21242570
chr17 42199098 42199108 SP1 JASPAR yes 42201070 1962 21242571
chr17 42199101 42199106 SP1 TRANSFAC yes 42201070 1964 21242572
chr17 42199102 42199112 SP1 JASPAR yes 42201070 1958 21242573
chr17 42199105 42199110 SP1 TRANSFAC yes 42201070 1960 21242574
chr17 42199109 42199113 LFA1 TRANSFAC yes 42201070 1957 21242575
chr17 42199124 42199130 NFE2 TRANSFAC yes 42201070 1940 21242576
chr17 42199129 42199135 SP1 TRANSFAC yes 42201070 1935 21242577
chr17 42199160 42199181 ZNF263 JASPAR yes 42201070 1889 21242578
chr17 42199163 42199168 GATA2 JASPAR yes 42201070 1902 21242579
chr17 42199171 42199178 NFATC2 JASPAR yes 42201070 1892 21242580
chr17 42199200 42199203 MYB TRANSFAC yes 42201070 1867 21242581
chr17 42199203 42199207 YY1 TRANSFAC yes 42201070 1863 21242582
chr17 42203886 42204117 ZNF274 GTRD no Bone Marrow (K562) 42201070 2816 21761886
chr17 42204195 42204811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3125 21761887
chr17 42204225 42204769 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3155 21761888
chr17 42204258 42204638 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3188 21761889
chr17 42204261 42204717 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3191 21761890
chr17 42204278 42204513 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3208 21761891
chr17 42204282 42204572 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3212 21761892
chr17 42204323 42204659 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3253 21761893
chr17 42204325 42204585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3255 21761894
chr17 42204437 42204553 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 3367 21761895
chr17 42205749 42206001 ZNF143 GTRD no Epithelial (MCF-7) 42201070 4679 21761896
chr17 42205781 42206045 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 42201070 4711 21761897
chr17 42205831 42206031 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 42201070 4761 21761898
SNPs associated with HDAC5[ENSG00000108840.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 42173752 rs228746 T C 0 Esophagus 1.23195e-11 4887889
chr17 41803431 rs75107570 T C 350683 Esophagus 0.263259 4885960
chr17 42358333 rs140931982 A G 157263 Heart 0.113415 4889000
chr17 41442962 rs57215208 C A 711152 Heart 0.267923 4882749
chr17 41537474 rs201815689 T TACCAGGCTCTTG 616640 Pancreas 0.0401933 4883722
chr17 41823225 rs9899889 T A,G 330889 Spleen 0.270265 4886175
chr17 41516261 rs78701771 T C 637853 Thyroid 0.134746 4883483
chr17 41809207 rs145947882 A C 344907 Liver 0.4031 4886015
chr17 41640774 rs369367121 CTTAG C 513340 Lung 0.127306 4884275
chr17 42868754 rs191898024 G T 667684 Stomach 0.0679032 4891473
chr17 41971934 rs11868645 G A 182180 Adrenal 0.39793 4886885
Details of HDAC5[ENSG00000108840.11]
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Genomic Location chr17:42154114-42201070[-]
TSS 42201070
Gene Name HDAC5
Ensembl ID ENSG00000108840.11
ENTREZID 10014
Uniprot
Q9UQL6
Protein Name
Histone deacetylase 5
Expression levels of HDAC5[ENSG00000108840.11]
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