EnhancerDB
  1. Home
  2. Gene
  3. TTC1[ENSG00000113312.6]
Enhancers that regulate TTC1[ENSG00000113312.6]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 159322847 159337795 enh38578 159436120 98325
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
chr5 159352862 159358382 enh38579 159436120 77738
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
chr5 159355194 159355367 vista49900 159436120 80753
VISTA
chr5 159358778 159366240 enh46010 159436120 69880
Skin (Keratinocyte) Muscle (Myotube) Prostate (RWPE1)
chr5 159376518 159380675 enh38580 159436120 55445
Muscle (Myoblast) Astrocyte
chr5 159390665 159394815 enh94625 159436120 41305
Spleen
chr5 159396178 159405017 enh38581 159436120 31103
Muscle (Myoblast) Astrocyte
chr5 159402452 159402764 vista49901 159436120 33356
VISTA
chr5 159406625 159412245 enh38582 159436120 23875
Skin (Keratinocyte) Prostate (PC-3) Astrocyte Colon (HCT116) Lung (PC-9)
chr5 159414162 159414427 vista49902 159436120 21693
VISTA
chr5 159419234 159419398 vista49903 159436120 16722
VISTA
chr5 159426565 159431055 enh110248 159436120 5065
Stomach
chr5 159434366 159434726 vista49904 159436120 1394
VISTA
chr5 159441865 159451115 enh38583 159436120 5745
Large Intestine Astrocyte Muscle (A673) Peripheral Blood (MM.1S) Pancreas (Panc1) Spleen Blood (T-cell)
chr5 159451021 159451194 vista49905 159436120 14901
VISTA
chr5 159454725 159460295 enh77761 159436120 18605
Muscle (A673) Uterus Stomach
chr5 159467780 159474595 enh72081 159436120 31660
Neural Stem Cells (H9)
chr5 159471418 159471693 vista49906 159436120 35298
VISTA
chr5 159479165 159484115 enh38584 159436120 43045
Astrocyte Prostate (PC-3) Colon (HCT116)
chr5 159480874 159481257 vista49907 159436120 44754
VISTA
chr5 159494245 159500895 enh22764 159436120 58125
Ovary Large Intestine Muscle (A673) Placenta Peripheral Blood (MM.1S) Pancreas Stomach
chr5 159496389 159496537 vista49908 159436120 60269
VISTA
chr5 159505605 159513164 enh38585 159436120 69485
Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube)
chr5 159522765 159527545 enh8844 159436120 86645
Blood (OCI-LY7) Blood (Karpas-422)
chr5 159528105 159535115 enh8845 159436120 91985
Blood (OCI-LY7) Muscle (A673) Thyroid Blood (Karpas-422) Stomach
chr5 159533500 159533764 vista49909 159436120 97380
VISTA
Transcript facotrs that regulate TTC1[ENSG00000113312.6]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr5 159434366 159434381 FOXP1 JASPAR yes 159436120 1739 70750902
chr5 159434366 159434387 IRF1 JASPAR yes 159436120 1733 70750903
chr5 159434367 159434373 TBP TRANSFAC yes 159436120 1747 70750904
chr5 159434367 159434382 FOXP1 JASPAR yes 159436120 1738 70750905
chr5 159434370 159434385 PRDM1 JASPAR yes 159436120 1735 70750906
chr5 159434370 159434385 STAT2 JASPAR yes 159436120 1735 70750907
chr5 159434372 159434393 IRF1 JASPAR yes 159436120 1727 70750908
chr5 159434378 159434399 IRF1 JASPAR yes 159436120 1721 70750909
chr5 159434404 159434411 NKX3-1 JASPAR yes 159436120 1709 70750910
chr5 159434408 159434411 MYB TRANSFAC yes 159436120 1709 70750911
chr5 159434408 159434424 E2F2 JASPAR yes 159436120 1696 70750912
chr5 159434462 159434472 MEOX2 JASPAR yes 159436120 1648 70750913
chr5 159434464 159434474 PAX7 JASPAR yes 159436120 1646 70750914
chr5 159434464 159434475 PHOX2A JASPAR yes 159436120 1645 70750915
chr5 159434464 159434475 PROP1 JASPAR yes 159436120 1645 70750916
chr5 159434486 159434490 YY1 TRANSFAC yes 159436120 1630 70750917
chr5 159434493 159434507 ZIC1 JASPAR yes 159436120 1613 70750918
chr5 159434501 159434522 MAFG JASPAR yes 159436120 1598 70750919
chr5 159434547 159434562 FOXP1 JASPAR yes 159436120 1558 70750920
chr5 159434548 159434557 SRY JASPAR yes 159436120 1563 70750921
chr5 159434550 159434558 FOXO3 JASPAR yes 159436120 1562 70750922
chr5 159434573 159434578 ETS2 TRANSFAC yes 159436120 1542 70750923
chr5 159434589 159434592 MYB TRANSFAC yes 159436120 1528 70750924
chr5 159434597 159434607 HOXA13 JASPAR yes 159436120 1513 70750925
chr5 159434597 159434607 HOXB13 JASPAR yes 159436120 1513 70750926
chr5 159434597 159434607 HOXD13 JASPAR yes 159436120 1513 70750927
chr5 159434598 159434607 CDX1 JASPAR yes 159436120 1513 70750928
chr5 159434598 159434609 CDX2 JASPAR yes 159436120 1511 70750929
chr5 159434608 159434624 POU4F2 JASPAR yes 159436120 1496 70750930
chr5 159434608 159434624 POU4F3 JASPAR yes 159436120 1496 70750931
chr5 159434610 159434624 POU4F1 JASPAR yes 159436120 1496 70750932
chr5 159434610 159434625 HNF1A JASPAR yes 159436120 1495 70750933
chr5 159434611 159434624 HNF1B JASPAR yes 159436120 1496 70750934
chr5 159434612 159434619 NKX3-1 JASPAR yes 159436120 1501 70750935
chr5 159434612 159434628 POU4F2 JASPAR yes 159436120 1492 70750936
chr5 159434613 159434628 FOXA1 JASPAR yes 159436120 1492 70750937
chr5 159434614 159434626 FOXI1 JASPAR yes 159436120 1494 70750938
chr5 159434614 159434628 POU4F1 JASPAR yes 159436120 1492 70750939
chr5 159434615 159434627 FOXC2 JASPAR yes 159436120 1493 70750940
chr5 159434616 159434627 FOXB1 JASPAR yes 159436120 1493 70750941
chr5 159434616 159434627 FOXC1 JASPAR yes 159436120 1493 70750942
chr5 159434616 159434627 PROP1 JASPAR yes 159436120 1493 70750943
chr5 159434617 159434621 YY1 TRANSFAC yes 159436120 1499 70750944
chr5 159434621 159434625 YY1 TRANSFAC yes 159436120 1495 70750945
chr5 159434626 159434640 NR2F1 JASPAR yes 159436120 1480 70750946
chr5 159434643 159434653 NFATC3 JASPAR yes 159436120 1467 70750947
chr5 159434649 159434653 YY1 TRANSFAC yes 159436120 1467 70750948
chr5 159434659 159434670 PHOX2A JASPAR yes 159436120 1450 70750949
chr5 159434659 159434670 PROP1 JASPAR yes 159436120 1450 70750950
chr5 159434661 159434666 MYB TRANSFAC yes 159436120 1454 70750951
chr5 159434668 159434671 MYB TRANSFAC yes 159436120 1449 70750952
chr5 159434675 159434684 NKX3-2 JASPAR yes 159436120 1436 70750953
chr5 159434675 159434685 NKX2-3 JASPAR yes 159436120 1435 70750954
chr5 159434676 159434684 ISL2 JASPAR yes 159436120 1436 70750955
chr5 159434676 159434685 NKX2-8 JASPAR yes 159436120 1435 70750956
chr5 159434691 159434694 MYB TRANSFAC yes 159436120 1426 70750957
chr5 159434695 159434699 YY1 TRANSFAC yes 159436120 1421 70750958
chr5 159434696 159434717 IRF1 JASPAR yes 159436120 1403 70750959
chr5 159434697 159434718 IRF1 JASPAR yes 159436120 1402 70750960
chr5 159434698 159434713 STAT2 JASPAR yes 159436120 1407 70750961
chr5 159434698 159434719 IRF1 JASPAR yes 159436120 1401 70750962
chr5 159434699 159434720 IRF1 JASPAR yes 159436120 1400 70750963
chr5 159434700 159434721 IRF1 JASPAR yes 159436120 1399 70750964
chr5 159434701 159434716 FOXP1 JASPAR yes 159436120 1404 70750965
chr5 159434701 159434722 IRF1 JASPAR yes 159436120 1398 70750966
chr5 159434702 159434717 FOXP1 JASPAR yes 159436120 1403 70750967
chr5 159434702 159434723 IRF1 JASPAR yes 159436120 1397 70750968
chr5 159434703 159434718 FOXP1 JASPAR yes 159436120 1402 70750969
chr5 159434703 159434724 IRF1 JASPAR yes 159436120 1396 70750970
chr5 159434704 159434719 FOXP1 JASPAR yes 159436120 1401 70750971
chr5 159434704 159434725 IRF1 JASPAR yes 159436120 1395 70750972
chr5 159434705 159434720 FOXP1 JASPAR yes 159436120 1400 70750973
chr5 159434706 159434721 FOXP1 JASPAR yes 159436120 1399 70750974
chr5 159434707 159434722 FOXP1 JASPAR yes 159436120 1398 70750975
chr5 159434708 159434723 FOXP1 JASPAR yes 159436120 1397 70750976
chr5 159434709 159434724 FOXP1 JASPAR yes 159436120 1396 70750977
chr5 159434710 159434725 FOXP1 JASPAR yes 159436120 1395 70750978
chr5 159434711 159434726 FOXP1 JASPAR yes 159436120 1394 70750979
SNPs associated with TTC1[ENSG00000113312.6], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 159436546 rs10044313 C T 0 Esophagus 0.0351063 8657079
chr5 160317520 rs142356083 AT A 824970 Pancreas 0.0795613 8661695
chr5 158616290 rs146151508 T C 819830 Ovary 0.230437 8652610
chr5 159042329 rs57356843 C G 393791 Thyroid 0.258806 8654572
chr5 158610855 rs7448744 C T 825265 Liver 0.418407 8652540
chr5 159254205 rs78946125 A G 181915 Stomach 0.396741 8655917
chr5 159009273 rs11948965 G A 426847 Adrenal 0.0683247 8654472
Details of TTC1[ENSG00000113312.6]
Back to top
Genomic Location chr5:159436120-159492550[+]
TSS 159436120
Gene Name TTC1
Ensembl ID ENSG00000113312.6
ENTREZID 7265
Uniprot
Q99614
Protein Name
Tetratricopeptide repeat protein 1
Expression levels of TTC1[ENSG00000113312.6]
Back to top