EnhancerDB
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Enhancers that regulate GDF1[ENSG00000130283.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 18907485 18922567 enh44634 19006905 84338
Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Bone (Osteoblast) Uterus Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr19 18946205 18961474 enh17979 19006905 45431
Liver (HepG2) Brain (SK-N-SH) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Blood (T-cell) Stomach
chr19 18960289 18960480 vista28947 19006905 46425
VISTA
chr19 18983423 18987515 enh44635 19006905 19390
Muscle (Myotube)
chr19 19003165 19003498 vista28948 19006905 3407
VISTA
chr19 19005223 19006062 vista28949 19006905 843
VISTA
chr19 19024496 19028796 enh76117 19006905 17591
Pancreas Muscle (A673) Liver (HepG2) Prostate (RWPE1)
chr19 19027750 19028071 vista28950 19006905 20845
VISTA
chr19 19054985 19066115 enh17980 19006905 48080
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Spleen Epithelial (MCF-7)
chr19 19075185 19088173 enh17981 19006905 68280
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr19 19078398 19078892 vista28951 19006905 71493
VISTA
chr19 19083211 19083621 vista28952 19006905 76306
VISTA
chr19 19092785 19099877 enh17982 19006905 85880
Esophagus Muscle (A673) Placenta Pancreas (Panc1) Stomach
chr19 19104705 19108855 enh76118 19006905 97800
Muscle (A673)
Transcript facotrs that regulate GDF1[ENSG00000130283.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 19003166 19003187 LUN1 TRANSFAC yes 19006905 3718 70824035
chr19 19003190 19003195 SP1 TRANSFAC yes 19006905 3710 70824036
chr19 19003191 19003196 SP1 TRANSFAC yes 19006905 3709 70824037
chr19 19003191 19003200 THAP1 JASPAR yes 19006905 3705 70824038
chr19 19003194 19003198 LFA1 TRANSFAC yes 19006905 3707 70824039
chr19 19003233 19003236 MYB TRANSFAC yes 19006905 3669 70824040
chr19 19003238 19003251 NFKB1 JASPAR yes 19006905 3654 70824041
chr19 19003238 19003251 NFKB2 JASPAR yes 19006905 3654 70824042
chr19 19003254 19003269 MEF2C JASPAR yes 19006905 3636 70824043
chr19 19003255 19003270 MEF2A JASPAR yes 19006905 3635 70824044
chr19 19003256 19003268 MEF2A JASPAR yes 19006905 3637 70824045
chr19 19003256 19003268 MEF2B JASPAR yes 19006905 3637 70824046
chr19 19003256 19003268 MEF2D JASPAR yes 19006905 3637 70824047
chr19 19003269 19003288 PAX5 JASPAR yes 19006905 3617 70824048
chr19 19003278 19003288 SP1 JASPAR yes 19006905 3617 70824049
chr19 19003288 19003293 SP1 TRANSFAC yes 19006905 3612 70824050
chr19 19003296 19003308 ZBTB7A JASPAR yes 19006905 3597 70824051
chr19 19003301 19003305 H4TF2 TRANSFAC yes 19006905 3600 70824052
chr19 19003316 19003337 ZNF263 JASPAR yes 19006905 3568 70824053
chr19 19003334 19003344 SREBF2 JASPAR yes 19006905 3561 70824054
chr19 19003348 19003358 SP1 JASPAR yes 19006905 3547 70824055
chr19 19003350 19003355 SP1 TRANSFAC yes 19006905 3550 70824056
chr19 19003374 19003684 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 3221 108399995
chr19 19003383 19003398 HNF4A JASPAR yes 19006905 3507 70824057
chr19 19003395 19003414 PAX5 JASPAR yes 19006905 3491 70824058
chr19 19003415 19003433 SRF JASPAR yes 19006905 3472 70824059
chr19 19003417 19003432 MEF2C JASPAR yes 19006905 3473 70824060
chr19 19003420 19003441 IRF1 JASPAR yes 19006905 3464 70824061
chr19 19003425 19003440 FOXP1 JASPAR yes 19006905 3465 70824062
chr19 19003434 19003449 RUNX2 JASPAR yes 19006905 3456 70824063
chr19 19003458 19003479 MAFG JASPAR yes 19006905 3426 70824064
chr19 19004822 19005315 TCF7L2 GTRD no Colon (HCT116) 19006905 1590 108399996
chr19 19004927 19005330 ZNF143 GTRD no Epithelial (MCF-7) 19006905 1575 108399997
chr19 19005026 19005370 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 1535 108399998
chr19 19005224 19005230 NFIC JASPAR yes 19006905 1675 70824065
chr19 19005257 19005263 SP1 TRANSFAC yes 19006905 1642 70824066
chr19 19005267 19005271 YY1 TRANSFAC yes 19006905 1634 70824067
chr19 19005274 19005282 EHF JASPAR yes 19006905 1623 70824068
chr19 19005305 19005315 SP1 JASPAR yes 19006905 1590 70824069
chr19 19005321 19005326 TFAP2A TRANSFAC yes 19006905 1579 70824070
chr19 19005321 19005327 MZF1 JASPAR yes 19006905 1578 70824071
chr19 19005323 19005329 MAZ TRANSFAC yes 19006905 1576 70824072
chr19 19005323 19005334 NFKB1 JASPAR yes 19006905 1571 70824073
chr19 19005328 19005341 TFAP2A JASPAR yes 19006905 1564 70824074
chr19 19005328 19005341 TFAP2B JASPAR yes 19006905 1564 70824075
chr19 19005328 19005341 TFAP2C JASPAR yes 19006905 1564 70824076
chr19 19005329 19005338 TFAP2A JASPAR yes 19006905 1567 70824077
chr19 19005331 19005340 TFAP2A JASPAR yes 19006905 1565 70824078
chr19 19005374 19005378 NFE TRANSFAC yes 19006905 1527 70824079
chr19 19005375 19005382 E2F1 TRANSFAC yes 19006905 1523 70824080
chr19 19005386 19005391 SP1 TRANSFAC yes 19006905 1514 70824081
chr19 19005399 19005418 REST JASPAR yes 19006905 1487 70824082
chr19 19005415 19005425 RELA JASPAR yes 19006905 1480 70824083
chr19 19005415 19005426 NFKB1 JASPAR yes 19006905 1479 70824084
chr19 19005436 19005441 ETS2 TRANSFAC yes 19006905 1464 70824085
chr19 19005449 19005453 LFA1 TRANSFAC yes 19006905 1452 70824086
chr19 19005461 19005466 GATA2 JASPAR yes 19006905 1439 70824087
chr19 19005473 19005485 HINFP JASPAR yes 19006905 1420 70824088
chr19 19005475 19005494 REST JASPAR yes 19006905 1411 70824089
chr19 19005484 19005490 MAZ TRANSFAC yes 19006905 1415 70824090
chr19 19005488 19005493 SP1 TRANSFAC yes 19006905 1412 70824091
chr19 19005504 19005508 NFE TRANSFAC yes 19006905 1397 70824092
chr19 19005508 19005518 MZF1 JASPAR yes 19006905 1387 70824093
chr19 19005511 19005517 SP1 TRANSFAC yes 19006905 1388 70824094
chr19 19005511 19005521 SP1 JASPAR yes 19006905 1384 70824095
chr19 19005511 19005521 ZNF740 JASPAR yes 19006905 1384 70824096
chr19 19005518 19005532 ZIC1 JASPAR yes 19006905 1373 70824097
chr19 19005521 19005541 RREB1 JASPAR yes 19006905 1364 70824098
chr19 19005523 19005538 RUNX2 JASPAR yes 19006905 1367 70824099
chr19 19005531 19005543 INSM1 JASPAR yes 19006905 1362 70824100
chr19 19005549 19005559 GCM2 JASPAR yes 19006905 1346 70824101
chr19 19005562 19005567 TFAP2A TRANSFAC yes 19006905 1338 70824102
chr19 19005562 19005568 MZF1 JASPAR yes 19006905 1337 70824103
chr19 19005562 19005583 ZNF263 JASPAR yes 19006905 1322 70824104
chr19 19005574 19005579 TFAP2A TRANSFAC yes 19006905 1326 70824105
chr19 19005574 19005580 MZF1 JASPAR yes 19006905 1325 70824106
chr19 19005580 19005593 SMAD2 JASPAR yes 19006905 1312 70824107
chr19 19005583 19005597 TLX1 JASPAR yes 19006905 1308 70824108
chr19 19005584 19005597 SMAD2 JASPAR yes 19006905 1308 70824109
chr19 19005595 19005612 ZNF410 JASPAR yes 19006905 1293 70824110
chr19 19005634 19005653 CTCF JASPAR yes 19006905 1252 70824111
chr19 19005654 19005660 LEF1 TRANSFAC yes 19006905 1245 70824112
chr19 19005654 19005660 SOX10 JASPAR yes 19006905 1245 70824113
chr19 19005661 19005681 ESR1 JASPAR yes 19006905 1224 70824114
chr19 19005664 19005673 HIC2 JASPAR yes 19006905 1232 70824115
chr19 19005665 19005683 ESR2 JASPAR yes 19006905 1222 70824116
chr19 19005667 19005671 LFA1 TRANSFAC yes 19006905 1234 70824117
chr19 19005667 19005682 AR JASPAR yes 19006905 1223 70824118
chr19 19005697 19005714 ESR1 JASPAR yes 19006905 1191 70824119
chr19 19005698 19005708 SP1 JASPAR yes 19006905 1197 70824120
chr19 19005698 19005713 ESR2 JASPAR yes 19006905 1192 70824121
chr19 19005699 19005704 SP1 TRANSFAC yes 19006905 1201 70824122
chr19 19005700 19005705 SP1 TRANSFAC yes 19006905 1200 70824123
chr19 19005700 19005706 SP1 TRANSFAC yes 19006905 1199 70824124
chr19 19005704 19005723 CTCF JASPAR yes 19006905 1182 70824125
chr19 19005705 19006221 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19006905 684 108399999
chr19 19005709 19005721 TAL1 JASPAR yes 19006905 1184 70824126
chr19 19005710 19005722 NHLH1 JASPAR yes 19006905 1183 70824127
chr19 19005711 19005721 FIGLA JASPAR yes 19006905 1184 70824128
chr19 19005711 19005721 MSC JASPAR yes 19006905 1184 70824129
chr19 19005711 19005721 TFAP4 JASPAR yes 19006905 1184 70824130
chr19 19005711 19005723 TAL1 JASPAR yes 19006905 1182 70824131
chr19 19005714 19006178 CTCF UCSC Txn Factor no Conserved 19006905 727 108400000
chr19 19005718 19005722 H4TF2 TRANSFAC yes 19006905 1183 70824132
chr19 19005725 19005736 NFKB1 JASPAR yes 19006905 1169 70824133
chr19 19005725 19006085 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 19006905 820 108400001
chr19 19005746 19006116 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 789 108400002
chr19 19005749 19006279 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19006905 626 108400003
chr19 19005766 19005785 REST JASPAR yes 19006905 1120 70824134
chr19 19005772 19005789 ESR1 JASPAR yes 19006905 1116 70824135
chr19 19005779 19006083 RAD21 UCSC Txn Factor no Conserved 19006905 822 108400004
chr19 19005785 19005791 SP1 TRANSFAC yes 19006905 1114 70824136
chr19 19005785 19005795 SP1 JASPAR yes 19006905 1110 70824137
chr19 19005785 19005800 TFAP2C JASPAR yes 19006905 1105 70824138
chr19 19005787 19005801 EBF1 JASPAR yes 19006905 1104 70824139
chr19 19005788 19005799 EBF1 JASPAR yes 19006905 1106 70824140
chr19 19005788 19006188 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 717 108400005
chr19 19005789 19005795 MZF1 JASPAR yes 19006905 1110 70824141
chr19 19005795 19005800 ETS2 TRANSFAC yes 19006905 1105 70824142
chr19 19005800 19006090 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 815 108400006
chr19 19005800 19006196 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19006905 709 108400007
chr19 19005801 19006071 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 834 108400008
chr19 19005805 19006225 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 680 108400009
chr19 19005806 19006026 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 879 108400010
chr19 19005808 19005812 ESR1 TRANSFAC yes 19006905 1093 70824143
chr19 19005810 19005822 E2F1 JASPAR yes 19006905 1083 70824144
chr19 19005810 19006049 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 856 108400011
chr19 19005813 19006277 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 19006905 628 108400012
chr19 19005817 19005821 H1TF2 TRANSFAC yes 19006905 1084 70824145
chr19 19005817 19005821 NFE TRANSFAC yes 19006905 1084 70824146
chr19 19005817 19005821 SRF TRANSFAC yes 19006905 1084 70824147
chr19 19005817 19005828 ESRRA JASPAR yes 19006905 1077 70824148
chr19 19005820 19006064 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19006905 841 108400013
chr19 19005827 19006203 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 702 108400014
chr19 19005831 19005941 TCF7L2 GTRD no Colon (HCT116) 19006905 964 108400015
chr19 19005832 19006356 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 549 108400016
chr19 19005833 19005837 ESR1 TRANSFAC yes 19006905 1068 70824149
chr19 19005835 19006355 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19006905 550 108400017
chr19 19005836 19005981 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 924 108400018
chr19 19005837 19006058 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 847 108400019
chr19 19005840 19006130 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 19006905 775 108400020
chr19 19005847 19006137 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19006905 768 108400021
chr19 19005851 19006111 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19006905 794 108400022
chr19 19005857 19005876 RFX2 JASPAR yes 19006905 1029 70824150
chr19 19005857 19006107 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 19006905 798 108400023
chr19 19005863 19006133 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 772 108400024
chr19 19005864 19006240 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19006905 665 108400025
chr19 19005865 19006095 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 810 108400026
chr19 19005871 19005876 TFAP2A TRANSFAC yes 19006905 1029 70824151
chr19 19005871 19005877 MZF1 JASPAR yes 19006905 1028 70824152
chr19 19005872 19005940 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19006905 965 108400027
chr19 19005875 19005983 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 922 108400028
chr19 19005880 19006076 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 19006905 829 108400029
chr19 19005883 19005887 NFE TRANSFAC yes 19006905 1018 70824153
chr19 19005886 19005905 CTCF JASPAR yes 19006905 1000 70824154
chr19 19005911 19005926 TFAP2C JASPAR yes 19006905 979 70824155
chr19 19005916 19005931 TFAP2A JASPAR yes 19006905 974 70824156
chr19 19005916 19005931 TFAP2C JASPAR yes 19006905 974 70824157
chr19 19005918 19006068 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 19006905 837 108400030
chr19 19005919 19005930 TFAP2A JASPAR yes 19006905 975 70824158
chr19 19005919 19005931 TFAP2A JASPAR yes 19006905 974 70824159
chr19 19005919 19005931 TFAP2B JASPAR yes 19006905 974 70824160
chr19 19005919 19005931 TFAP2C JASPAR yes 19006905 974 70824161
chr19 19005920 19005929 TFAP2A JASPAR yes 19006905 976 70824162
chr19 19005921 19006305 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 19006905 600 108400031
chr19 19005933 19006017 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19006905 888 108400032
chr19 19005934 19006250 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 655 108400033
chr19 19005946 19005958 ZBTB7A JASPAR yes 19006905 947 70824163
chr19 19005947 19005959 ZBTB7C JASPAR yes 19006905 946 70824164
chr19 19005948 19006298 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 607 108400034
chr19 19005951 19006287 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 618 108400035
chr19 19005960 19005980 ESR1 JASPAR yes 19006905 925 70824165
chr19 19005964 19005982 ESR2 JASPAR yes 19006905 923 70824166
chr19 19005978 19006322 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 19006905 583 108400036
chr19 19005980 19006290 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 19006905 615 108400037
chr19 19005982 19005988 YY1 JASPAR yes 19006905 917 70824167
chr19 19005990 19006009 CTCF JASPAR yes 19006905 896 70824168
chr19 19005996 19006014 ESR1 JASPAR yes 19006905 891 70824169
chr19 19005997 19006014 ESR1 JASPAR yes 19006905 891 70824170
chr19 19005998 19006013 ESR2 JASPAR yes 19006905 892 70824171
chr19 19006006 19006308 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 597 108400038
chr19 19006012 19006282 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 19006905 623 108400039
chr19 19006014 19006020 GATA3 JASPAR yes 19006905 885 70824172
chr19 19006023 19006339 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 19006905 566 108400040
chr19 19006036 19006040 LFA1 TRANSFAC yes 19006905 865 70824173
SNPs associated with GDF1[ENSG00000130283.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of GDF1[ENSG00000130283.7]
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Genomic Location chr19:18979361-19006905[-]
TSS 19006905
Gene Name GDF1
Ensembl ID ENSG00000130283.7
ENTREZID 2657
Uniprot
P27539
A0A024R7N8
Protein Name
Embryonic growth/differentiation factor 1
Expression levels of GDF1[ENSG00000130283.7]
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