EnhancerDB
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Enhancers that regulate RAB11FIP4[ENSG00000131242.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 29614925 29621175 enh4358 29718642 97467
Prostate (PC-3) Blood (Karpas-422)
chr17 29633925 29639555 enh4359 29718642 79087
Blood (Karpas-422)
chr17 29637373 29637640 vista24390 29718642 81002
VISTA
chr17 29641803 29641965 vista24391 29718642 76677
VISTA
chr17 29696845 29700995 enh94303 29718642 17647
Spleen
chr17 29717293 29717639 vista24392 29718642 1003
VISTA
chr17 29719593 29719962 vista24393 29718642 951
VISTA
chr17 29720046 29720299 vista24394 29718642 1404
VISTA
chr17 29729033 29735610 enh115629 29718642 10391
Brain (SK-N-SH)
chr17 29738436 29745655 enh44407 29718642 19794
Liver (HepG2) Brain (SK-N-SH) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube)
chr17 29750265 29754695 enh52458 29718642 31623
Pancreas Large Intestine Heart
chr17 29759240 29759393 vista24395 29718642 40598
VISTA
chr17 29762425 29766575 enh88284 29718642 43783
Pancreas
chr17 29764327 29764507 vista24396 29718642 45685
VISTA
chr17 29769122 29773390 enh44408 29718642 50480
Muscle (Myotube)
chr17 29773525 29788335 enh17095 29718642 54883
Bone Marrow (K562) Esophagus Stomach Placenta Lung (PC-9) Spleen Muscle (Myotube) Epithelial (MCF-7)
chr17 29778166 29778494 vista24397 29718642 59524
VISTA
chr17 29780371 29780542 vista24398 29718642 61729
VISTA
chr17 29787763 29788137 vista24399 29718642 69121
VISTA
chr17 29789085 29807415 enh44409 29718642 70443
Liver (HepG2) Stomach Pancreas Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
chr17 29816091 29829595 enh4360 29718642 97449
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Stomach
chr17 29816760 29817002 vista24400 29718642 98118
VISTA
Transcript facotrs that regulate RAB11FIP4[ENSG00000131242.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 29715493 29718492 ZNF274 GTRD no Blood (GM12878) 29718642 150 108249304
chr17 29717304 29717318 MTF1 JASPAR yes 29718642 1324 21218168
chr17 29717324 29717796 ZNF274 GTRD no Blood (GM12878) 29718642 846 108249305
chr17 29717327 29717336 SP1 TRANSFAC yes 29718642 1306 21218169
chr17 29717328 29717333 SP1 TRANSFAC yes 29718642 1309 21218170
chr17 29717329 29717334 SP1 TRANSFAC yes 29718642 1308 21218171
chr17 29717344 29717778 ZNF274 GTRD no Bone Marrow (K562) 29718642 864 108249306
chr17 29717348 29717353 SP1 TRANSFAC yes 29718642 1289 21218172
chr17 29717351 29717361 NFKB1 JASPAR yes 29718642 1281 21218173
chr17 29717356 29717363 SPIB JASPAR yes 29718642 1279 21218174
chr17 29717396 29717406 POU6F2 JASPAR yes 29718642 1236 21218175
chr17 29717397 29717407 ALX3 JASPAR yes 29718642 1235 21218176
chr17 29717397 29717407 EMX1 JASPAR yes 29718642 1235 21218177
chr17 29717397 29717407 EMX2 JASPAR yes 29718642 1235 21218178
chr17 29717397 29717407 EN2 JASPAR yes 29718642 1235 21218179
chr17 29717397 29717407 EVX1 JASPAR yes 29718642 1235 21218180
chr17 29717397 29717407 EVX2 JASPAR yes 29718642 1235 21218181
chr17 29717397 29717407 GBX2 JASPAR yes 29718642 1235 21218182
chr17 29717397 29717407 HOXA2 JASPAR yes 29718642 1235 21218183
chr17 29717397 29717407 HOXB2 JASPAR yes 29718642 1235 21218184
chr17 29717397 29717407 HOXB3 JASPAR yes 29718642 1235 21218185
chr17 29717397 29717407 MEOX1 JASPAR yes 29718642 1235 21218186
chr17 29717397 29717407 MEOX2 JASPAR yes 29718642 1235 21218187
chr17 29717397 29717407 MNX1 JASPAR yes 29718642 1235 21218188
chr17 29717397 29717407 NOTO JASPAR yes 29718642 1235 21218189
chr17 29717397 29717408 HOXA10 JASPAR yes 29718642 1234 21218190
chr17 29717398 29717406 LMX1A JASPAR yes 29718642 1236 21218191
chr17 29717398 29717406 LMX1B JASPAR yes 29718642 1236 21218192
chr17 29717398 29717406 NKX6-1 JASPAR yes 29718642 1236 21218193
chr17 29717398 29717406 NKX6-2 JASPAR yes 29718642 1236 21218194
chr17 29717398 29717406 PDX1 JASPAR yes 29718642 1236 21218195
chr17 29717398 29717406 VAX1 JASPAR yes 29718642 1236 21218196
chr17 29717398 29717406 VAX2 JASPAR yes 29718642 1236 21218197
chr17 29717398 29717406 VSX1 JASPAR yes 29718642 1236 21218198
chr17 29717415 29717428 TFAP2A JASPAR yes 29718642 1214 21218199
chr17 29717415 29717428 TFAP2B JASPAR yes 29718642 1214 21218200
chr17 29717415 29717428 TFAP2C JASPAR yes 29718642 1214 21218201
chr17 29717415 29717430 TFAP2C JASPAR yes 29718642 1212 21218202
chr17 29717416 29717427 EBF1 JASPAR yes 29718642 1215 21218203
chr17 29717423 29717434 NFKB1 JASPAR yes 29718642 1208 21218204
chr17 29717427 29717438 STAT3 JASPAR yes 29718642 1204 21218205
chr17 29717439 29717449 MZF1 JASPAR yes 29718642 1193 21218206
chr17 29717450 29717454 LFA1 TRANSFAC yes 29718642 1188 21218207
chr17 29717464 29717480 POU4F3 JASPAR yes 29718642 1162 21218208
chr17 29717466 29717480 POU4F1 JASPAR yes 29718642 1162 21218209
chr17 29717466 29717481 HNF1A JASPAR yes 29718642 1161 21218210
chr17 29717467 29717480 HNF1B JASPAR yes 29718642 1162 21218211
chr17 29717468 29717480 HNF1B JASPAR yes 29718642 1162 21218212
chr17 29717476 29717479 MYB TRANSFAC yes 29718642 1163 21218213
chr17 29717478 29717487 HIC2 JASPAR yes 29718642 1155 21218214
chr17 29717481 29717485 LFA1 TRANSFAC yes 29718642 1157 21218215
chr17 29717482 29717492 ID4 JASPAR yes 29718642 1150 21218216
chr17 29717482 29717492 TCF4 JASPAR yes 29718642 1150 21218217
chr17 29717484 29717489 USF2 TRANSFAC yes 29718642 1153 21218218
chr17 29717488 29718100 ZNF274 GTRD no Cervix (HeLa-S3) 29718642 542 108249307
chr17 29717500 29717519 REST JASPAR yes 29718642 1123 21218219
chr17 29717503 29717518 MEF2C JASPAR yes 29718642 1124 21218220
chr17 29717515 29717529 GATA2 JASPAR yes 29718642 1113 21218221
chr17 29717517 29717525 GATA3 JASPAR yes 29718642 1117 21218222
chr17 29717517 29717525 GATA5 JASPAR yes 29718642 1117 21218223
chr17 29717520 29717532 YY1 JASPAR yes 29718642 1110 21218224
chr17 29717523 29717529 YY1 JASPAR yes 29718642 1113 21218225
chr17 29717531 29717537 YY1 JASPAR yes 29718642 1105 21218226
chr17 29717554 29717560 PEA3 TRANSFAC yes 29718642 1082 21218227
chr17 29717575 29717583 UEF1 TRANSFAC yes 29718642 1059 21218228
chr17 29717576 29717584 MEIS2 JASPAR yes 29718642 1058 21218229
chr17 29717576 29717584 MEIS3 JASPAR yes 29718642 1058 21218230
chr17 29717586 29717594 TBX15 JASPAR yes 29718642 1048 21218231
chr17 29717587 29717592 SP1 TRANSFAC yes 29718642 1050 21218232
chr17 29717608 29717628 RREB1 JASPAR yes 29718642 1014 21218233
chr17 29717617 29717631 TLX1 JASPAR yes 29718642 1011 21218234
chr17 29717624 29717629 SP1 TRANSFAC yes 29718642 1013 21218235
chr17 29717636 29718042 ZNF143 GTRD no Epithelial (MCF-7) 29718642 600 108249308
chr17 29719593 29719605 PKNOX2 JASPAR yes 29718642 951 21218236
chr17 29719612 29719626 TLX1 JASPAR yes 29718642 970 21218237
chr17 29719661 29719675 TCF7L2 JASPAR yes 29718642 1019 21218238
chr17 29719673 29719678 SP1 TRANSFAC yes 29718642 1031 21218239
chr17 29719673 29719679 SP1 TRANSFAC yes 29718642 1031 21218240
chr17 29719676 29719681 SP1 TRANSFAC yes 29718642 1034 21218241
chr17 29719684 29719699 MEF2C JASPAR yes 29718642 1042 21218242
chr17 29719687 29719691 YY1 TRANSFAC yes 29718642 1045 21218243
chr17 29719690 29720220 TCF7L2 GTRD no Colon (HCT116) 29718642 1048 108249309
chr17 29719690 29720220 TCF7L2 GTRD no Colon (HCT116) 29718642 1048 108249310
chr17 29719691 29719696 TFAP2A TRANSFAC yes 29718642 1049 21218244
chr17 29719691 29719697 MZF1 JASPAR yes 29718642 1049 21218245
chr17 29719706 29719714 GMEB2 JASPAR yes 29718642 1064 21218246
chr17 29719714 29719723 SRY JASPAR yes 29718642 1072 21218247
chr17 29719719 29719722 MYB TRANSFAC yes 29718642 1077 21218248
chr17 29719793 29719812 CTCF JASPAR yes 29718642 1151 21218249
chr17 29719812 29719827 RFX5 JASPAR yes 29718642 1170 21218250
chr17 29719817 29719822 TFAP2A TRANSFAC yes 29718642 1175 21218251
chr17 29719817 29719823 MZF1 JASPAR yes 29718642 1175 21218252
chr17 29719818 29719828 SP1 JASPAR yes 29718642 1176 21218253
chr17 29719824 29719829 TFAP2A TRANSFAC yes 29718642 1182 21218254
chr17 29719824 29719830 MZF1 JASPAR yes 29718642 1182 21218255
chr17 29719832 29719846 PLAG1 JASPAR yes 29718642 1190 21218256
chr17 29719833 29719847 EBF1 JASPAR yes 29718642 1191 21218257
chr17 29719834 29719845 EBF1 JASPAR yes 29718642 1192 21218258
chr17 29719855 29719864 ZEB1 JASPAR yes 29718642 1213 21218259
chr17 29719856 29719866 TCF4 JASPAR yes 29718642 1214 21218260
chr17 29719858 29719863 USF2 TRANSFAC yes 29718642 1216 21218261
chr17 29719872 29719876 ESR1 TRANSFAC yes 29718642 1230 21218262
chr17 29719872 29719884 INSM1 JASPAR yes 29718642 1230 21218263
chr17 29719876 29719887 NFKB1 JASPAR yes 29718642 1234 21218264
chr17 29719876 29719889 NFKB1 JASPAR yes 29718642 1234 21218265
chr17 29719876 29719889 NFKB2 JASPAR yes 29718642 1234 21218266
chr17 29719877 29719887 NFKB1 JASPAR yes 29718642 1235 21218267
chr17 29719877 29719887 RELA JASPAR yes 29718642 1235 21218268
chr17 29719877 29719888 NFKB1 JASPAR yes 29718642 1235 21218269
chr17 29719878 29724417 ZNF274 GTRD no Blood (GM12878) 29718642 1236 108249311
chr17 29719878 29724417 ZNF274 GTRD no Blood (GM12878) 29718642 1236 108249312
chr17 29719883 29719898 TFAP2C JASPAR yes 29718642 1241 21218270
chr17 29719884 29719895 EBF1 JASPAR yes 29718642 1242 21218271
chr17 29719908 29719927 RFX2 JASPAR yes 29718642 1266 21218272
chr17 29719909 29719919 RELA JASPAR yes 29718642 1267 21218273
chr17 29719917 29719928 ESRRB JASPAR yes 29718642 1275 21218274
chr17 29719920 29719936 SRF JASPAR yes 29718642 1278 21218275
chr17 29719922 29719928 YY1 JASPAR yes 29718642 1280 21218276
chr17 29719928 29719943 TFAP2A JASPAR yes 29718642 1286 21218277
chr17 29719928 29719943 TFAP2C JASPAR yes 29718642 1286 21218278
chr17 29719930 29719945 TFAP2A JASPAR yes 29718642 1288 21218279
chr17 29719930 29719945 TFAP2C JASPAR yes 29718642 1288 21218280
chr17 29719931 29719942 TFAP2A JASPAR yes 29718642 1289 21218281
chr17 29719931 29719942 TFAP2B JASPAR yes 29718642 1289 21218282
chr17 29719931 29719942 TFAP2C JASPAR yes 29718642 1289 21218283
chr17 29719942 29719956 GLIS2 JASPAR yes 29718642 1300 21218284
chr17 29719942 29719956 GLIS3 JASPAR yes 29718642 1300 21218285
chr17 29719950 29719955 SP1 TRANSFAC yes 29718642 1308 21218286
chr17 29719953 29719962 TFAP2A JASPAR yes 29718642 1311 21218287
chr17 29719961 29722094 ZNF274 GTRD no Bone Marrow (K562) 29718642 1319 108249313
chr17 29719961 29722094 ZNF274 GTRD no Bone Marrow (K562) 29718642 1319 108249314
chr17 29720046 29720052 YY1 JASPAR yes 29718642 1404 21218288
chr17 29720058 29720070 HES7 JASPAR yes 29718642 1416 21218289
chr17 29720071 29720077 ATF1 TRANSFAC yes 29718642 1429 21218290
chr17 29720071 29720083 CREB1 JASPAR yes 29718642 1429 21218291
chr17 29720074 29720085 EBF1 JASPAR yes 29718642 1432 21218292
chr17 29720111 29720122 GCM1 JASPAR yes 29718642 1469 21218293
chr17 29720112 29720122 GCM2 JASPAR yes 29718642 1470 21218294
chr17 29720115 29720124 ZEB1 JASPAR yes 29718642 1473 21218295
chr17 29720115 29720127 NHLH1 JASPAR yes 29718642 1473 21218296
chr17 29720116 29720126 ID4 JASPAR yes 29718642 1474 21218297
chr17 29720116 29720126 TCF3 JASPAR yes 29718642 1474 21218298
chr17 29720116 29720126 TCF4 JASPAR yes 29718642 1474 21218299
chr17 29720118 29720123 USF2 TRANSFAC yes 29718642 1476 21218300
chr17 29720120 29720129 HIC2 JASPAR yes 29718642 1478 21218301
chr17 29720123 29720127 LFA1 TRANSFAC yes 29718642 1481 21218302
chr17 29720157 29720166 THAP1 JASPAR yes 29718642 1515 21218303
chr17 29720160 29720164 LFA1 TRANSFAC yes 29718642 1518 21218304
chr17 29720176 29720191 TFAP2A JASPAR yes 29718642 1534 21218305
chr17 29720176 29720191 TFAP2C JASPAR yes 29718642 1534 21218306
chr17 29720205 29720220 RUNX2 JASPAR yes 29718642 1563 21218307
chr17 29720214 29720224 REL JASPAR yes 29718642 1572 21218308
chr17 29720240 29720255 ESR2 JASPAR yes 29718642 1598 21218309
chr17 29720246 29720265 CTCF JASPAR yes 29718642 1604 21218310
chr17 29720263 29720269 TCF4 TRANSFAC yes 29718642 1621 21218311
SNPs associated with RAB11FIP4[ENSG00000131242.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 29743551 rs11657064 C T 0 Esophagus 3.66575e-09 4825226
chr17 30232411 rs112365723 C A,G,T 367175 Ovary 0.416899 4829050
chr17 29827429 rs2097719 G A 0 Thyroid 5.69508e-08 4826153
chr17 29791697 rs178882 G A 0 Stomach 0.0628823 4825740
Details of RAB11FIP4[ENSG00000131242.11]
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Genomic Location chr17:29718642-29865236[+]
TSS 29718642
Gene Name RAB11FIP4
Ensembl ID ENSG00000131242.11
ENTREZID 84440
Uniprot
Q86YS3
Protein Name
Alternative protein RAB11FIP4
Rab11 family-interacting protein 4
Expression levels of RAB11FIP4[ENSG00000131242.11]
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