EnhancerDB
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Enhancers that regulate CCDC97[ENSG00000142039.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 41727545 41731695 enh32942 41816094 84399
Astrocyte
chr19 41729438 41729579 vista29415 41816094 86515
VISTA
chr19 41731541 41731893 vista29416 41816094 84201
VISTA
chr19 41737680 41741830 enh94360 41816094 74264
Spleen
chr19 41771602 41771660 vista29417 41816094 44434
VISTA
chr19 41792489 41797297 enh5144 41816094 18797
Neural Stem Cells (H9) Blood (Karpas-422)
chr19 41795419 41795640 vista29418 41816094 20454
VISTA
chr19 41802534 41802970 vista29419 41816094 13124
VISTA
chr19 41803374 41803837 vista29420 41816094 12257
VISTA
chr19 41804006 41804567 vista29421 41816094 11527
VISTA
chr19 41814398 41814719 vista29422 41816094 1375
VISTA
chr19 41816681 41817091 vista29423 41816094 587
VISTA
chr19 41819266 41819494 vista29424 41816094 3172
VISTA
chr19 41823105 41843675 enh5145 41816094 7011
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell) Heart
chr19 41827649 41828097 vista29425 41816094 11555
VISTA
chr19 41831643 41832527 vista29426 41816094 15549
VISTA
chr19 41834727 41835191 vista29427 41816094 18633
VISTA
chr19 41849661 41849907 vista29428 41816094 33567
VISTA
chr19 41908829 41916438 enh5146 41816094 92735
Esophagus Thyroid Blood (Karpas-422) Neural Stem Cells (H9) Heart
chr19 41915515 41915996 vista29429 41816094 99421
VISTA
Transcript facotrs that regulate CCDC97[ENSG00000142039.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 41810883 41816036 ZNF274 GTRD no Bone Marrow (K562) 41816094 58 108410622
chr19 41811513 41814696 ZBTB33 GTRD no Lung (A549) 41816094 1398 108410623
chr19 41812345 41814520 ZNF143 GTRD no Epithelial (MCF-7) 41816094 1574 108410624
chr19 41813001 41814748 ZBTB33 GTRD no Brain (SK-N-SH) 41816094 1346 108410625
chr19 41813188 41814486 ZNF143 GTRD no Epithelial (MCF-7) 41816094 1608 108410626
chr19 41813579 41814690 ZNF274 GTRD no Bone Marrow (K562) 41816094 1404 108410627
chr19 41813640 41814604 ZNF274 GTRD no Bone Marrow (K562) 41816094 1490 108410628
chr19 41813835 41814713 ZNF143 GTRD no Epithelial (MCF-7) 41816094 1381 108410629
chr19 41813836 41815003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1091 108410630
chr19 41813875 41814531 TCF7L2 GTRD no Colon (HCT116) 41816094 1563 108410631
chr19 41814283 41814773 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1321 108410632
chr19 41814307 41814807 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 1287 108410633
chr19 41814333 41814789 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1305 108410634
chr19 41814333 41814897 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1197 108410635
chr19 41814362 41814782 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1312 108410636
chr19 41814364 41814848 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 1246 108410637
chr19 41814366 41814776 RELA UCSC Txn Factor no Conserved 41816094 1318 108410638
chr19 41814369 41814845 CTCF UCSC Txn Factor no Conserved 41816094 1249 108410639
chr19 41814382 41814818 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1276 108410640
chr19 41814386 41814822 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1272 108410641
chr19 41814389 41814633 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1461 108410642
chr19 41814395 41814766 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1328 108410643
chr19 41814409 41814819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1275 108410644
chr19 41814411 41814741 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1353 108410645
chr19 41814412 41814416 LFA1 TRANSFAC yes 41816094 1678 70848335
chr19 41814412 41814768 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1326 108410646
chr19 41814414 41814784 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1310 108410647
chr19 41814422 41814746 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1348 108410648
chr19 41814426 41814440 STAT1 JASPAR yes 41816094 1654 70848336
chr19 41814426 41814441 PRDM1 JASPAR yes 41816094 1653 70848337
chr19 41814426 41814441 STAT2 JASPAR yes 41816094 1653 70848338
chr19 41814427 41814433 MAZ TRANSFAC yes 41816094 1661 70848339
chr19 41814427 41814438 E2F6 JASPAR yes 41816094 1656 70848340
chr19 41814427 41814572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1522 108410649
chr19 41814427 41814737 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1357 108410650
chr19 41814427 41814797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1297 108410651
chr19 41814430 41814753 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1341 108410652
chr19 41814432 41814768 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 41816094 1326 108410653
chr19 41814436 41814696 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 41816094 1398 108410654
chr19 41814440 41814853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1241 108410655
chr19 41814440 41814880 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 41816094 1214 108410656
chr19 41814442 41814772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1322 108410657
chr19 41814448 41814718 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 41816094 1376 108410658
chr19 41814448 41814738 SMC3 UCSC Txn Factor no Conserved 41816094 1356 108410659
chr19 41814451 41814775 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1319 108410660
chr19 41814452 41814732 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 1362 108410661
chr19 41814453 41814743 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1351 108410662
chr19 41814456 41814752 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 41816094 1342 108410663
chr19 41814456 41814836 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1258 108410664
chr19 41814459 41814779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1315 108410665
chr19 41814462 41814466 LFA1 TRANSFAC yes 41816094 1628 70848341
chr19 41814463 41814723 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 1371 108410666
chr19 41814463 41814733 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1361 108410667
chr19 41814464 41814699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 1395 108410668
chr19 41814465 41815041 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 1053 108410669
chr19 41814468 41814738 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1356 108410670
chr19 41814469 41814759 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1335 108410671
chr19 41814470 41814700 RAD21 UCSC Txn Factor no Conserved 41816094 1394 108410672
chr19 41814475 41814765 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1329 108410673
chr19 41814477 41814718 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1376 108410674
chr19 41814479 41814484 ETS2 TRANSFAC yes 41816094 1610 70848342
chr19 41814479 41814999 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1095 108410675
chr19 41814484 41814764 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1330 108410676
chr19 41814488 41814707 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1387 108410677
chr19 41814491 41814714 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 1380 108410678
chr19 41814491 41814747 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 1347 108410679
chr19 41814493 41814723 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1371 108410680
chr19 41814494 41814508 PLAG1 JASPAR yes 41816094 1586 70848343
chr19 41814494 41814711 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 41816094 1383 108410681
chr19 41814497 41814853 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 41816094 1241 108410682
chr19 41814504 41814673 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 41816094 1421 108410683
chr19 41814507 41814669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1425 108410684
chr19 41814507 41814685 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1409 108410685
chr19 41814508 41814520 TEAD1 JASPAR yes 41816094 1574 70848344
chr19 41814508 41814680 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1414 108410686
chr19 41814510 41814669 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1425 108410687
chr19 41814510 41814674 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 41816094 1420 108410688
chr19 41814512 41814527 HSF1 JASPAR yes 41816094 1567 70848345
chr19 41814513 41814645 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1449 108410689
chr19 41814516 41814671 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 1423 108410690
chr19 41814520 41814665 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 1429 108410691
chr19 41814520 41814716 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 41816094 1378 108410692
chr19 41814539 41814600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 1494 108410693
chr19 41814539 41814701 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 41816094 1393 108410694
chr19 41814540 41814635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 1459 108410695
chr19 41814549 41814560 NFKB1 JASPAR yes 41816094 1534 70848346
chr19 41814550 41814560 NFKB1 JASPAR yes 41816094 1534 70848347
chr19 41814550 41814560 RELA JASPAR yes 41816094 1534 70848348
chr19 41814550 41814560 REL JASPAR yes 41816094 1534 70848349
chr19 41814566 41814660 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 41816094 1434 108410696
chr19 41814566 41814688 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 41816094 1406 108410697
chr19 41814569 41814633 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 1461 108410698
chr19 41814571 41814583 BHLHE23 JASPAR yes 41816094 1511 70848350
chr19 41814572 41814582 BHLHE22 JASPAR yes 41816094 1512 70848351
chr19 41814572 41814582 OLIG1 JASPAR yes 41816094 1512 70848352
chr19 41814572 41814582 OLIG2 JASPAR yes 41816094 1512 70848353
chr19 41814572 41814582 OLIG3 JASPAR yes 41816094 1512 70848354
chr19 41814588 41814607 CTCF JASPAR yes 41816094 1487 70848355
chr19 41814589 41814851 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 41816094 1243 108410699
chr19 41814598 41814617 CTCF JASPAR yes 41816094 1477 70848356
chr19 41814631 41814873 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 41816094 1221 108410700
chr19 41814652 41814666 TLX1 JASPAR yes 41816094 1428 70848357
chr19 41814672 41814868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 1226 108410701
chr19 41814674 41814688 EBF1 JASPAR yes 41816094 1406 70848358
chr19 41814675 41814686 EBF1 JASPAR yes 41816094 1408 70848359
chr19 41814683 41814697 POU1F1 JASPAR yes 41816094 1397 70848360
chr19 41814684 41814696 POU3F1 JASPAR yes 41816094 1398 70848361
chr19 41814684 41814696 POU3F2 JASPAR yes 41816094 1398 70848362
chr19 41814684 41814697 POU2F2 JASPAR yes 41816094 1397 70848363
chr19 41814684 41815204 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 890 108410702
chr19 41814685 41814694 POU3F4 JASPAR yes 41816094 1400 70848364
chr19 41814685 41814694 POU5F1B JASPAR yes 41816094 1400 70848365
chr19 41814686 41814693 POU2F1 TRANSFAC yes 41816094 1401 70848366
chr19 41814686 41814693 POU2F2 TRANSFAC yes 41816094 1401 70848367
chr19 41814689 41814703 SPI1 JASPAR yes 41816094 1391 70848368
chr19 41814689 41814703 SPIC JASPAR yes 41816094 1391 70848369
chr19 41814693 41814698 TFAP2A TRANSFAC yes 41816094 1396 70848370
chr19 41814693 41814699 MZF1 JASPAR yes 41816094 1395 70848371
chr19 41814695 41814700 ETS2 TRANSFAC yes 41816094 1394 70848372
chr19 41814701 41814711 GABPA JASPAR yes 41816094 1383 70848373
chr19 41814701 41814714 ELF1 JASPAR yes 41816094 1380 70848374
chr19 41814704 41814711 SPIB JASPAR yes 41816094 1383 70848375
chr19 41815716 41816771 POLR2A UCSC Txn Factor no Conserved 41816094 378 108410703
chr19 41816040 41816690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 54 108410704
chr19 41816381 41816807 TCF7L2 GTRD no Colon (HCT116) 41816094 287 108410705
chr19 41816395 41816719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 41816094 301 108410706
chr19 41816447 41816703 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 41816094 353 108410707
chr19 41816456 41816720 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 362 108410708
chr19 41816484 41816748 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 41816094 390 108410709
chr19 41816616 41817120 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 41816094 522 108410710
chr19 41816697 41816702 GATA2 JASPAR yes 41816094 603 70848376
chr19 41816701 41816705 H1TF2 TRANSFAC yes 41816094 607 70848377
chr19 41816701 41816705 NFE TRANSFAC yes 41816094 607 70848378
chr19 41816701 41816705 SRF TRANSFAC yes 41816094 607 70848379
chr19 41816707 41816710 MYB TRANSFAC yes 41816094 613 70848380
chr19 41816713 41816718 ETS2 TRANSFAC yes 41816094 619 70848381
chr19 41816719 41816723 YY1 TRANSFAC yes 41816094 625 70848382
chr19 41816729 41816732 MYB TRANSFAC yes 41816094 635 70848383
chr19 41816737 41816749 E2F8 JASPAR yes 41816094 643 70848384
chr19 41816738 41816750 E2F8 JASPAR yes 41816094 644 70848385
chr19 41816745 41816755 HINFP JASPAR yes 41816094 651 70848386
chr19 41816772 41816778 TCF1 TRANSFAC yes 41816094 678 70848387
chr19 41816807 41816821 TCF7L2 JASPAR yes 41816094 713 70848388
chr19 41816811 41816817 TCF1 TRANSFAC yes 41816094 717 70848389
chr19 41816823 41816843 RREB1 JASPAR yes 41816094 729 70848390
chr19 41816827 41816837 SREBF1 JASPAR yes 41816094 733 70848391
chr19 41816834 41816844 TBX21 JASPAR yes 41816094 740 70848392
chr19 41816834 41816845 TBX20 JASPAR yes 41816094 740 70848393
chr19 41816834 41816845 TBX2 JASPAR yes 41816094 740 70848394
chr19 41816834 41816847 EOMES JASPAR yes 41816094 740 70848395
chr19 41816835 41816843 MGA JASPAR yes 41816094 741 70848396
chr19 41816835 41816843 TBX15 JASPAR yes 41816094 741 70848397
chr19 41816835 41816843 TBX1 JASPAR yes 41816094 741 70848398
chr19 41816835 41816843 TBX4 JASPAR yes 41816094 741 70848399
chr19 41816835 41816843 TBX5 JASPAR yes 41816094 741 70848400
chr19 41816835 41816845 TBR1 JASPAR yes 41816094 741 70848401
chr19 41816841 41816846 NFY TRANSFAC yes 41816094 747 70848402
chr19 41816879 41816889 EN2 JASPAR yes 41816094 785 70848403
chr19 41816897 41816915 NFYA JASPAR yes 41816094 803 70848404
chr19 41816902 41816914 PBX1 JASPAR yes 41816094 808 70848405
chr19 41816905 41816910 NFY TRANSFAC yes 41816094 811 70848406
chr19 41816920 41816930 MZF1 JASPAR yes 41816094 826 70848407
chr19 41816940 41816955 PRDM1 JASPAR yes 41816094 846 70848408
chr19 41816970 41816985 MEF2C JASPAR yes 41816094 876 70848409
chr19 41816971 41816986 MEF2A JASPAR yes 41816094 877 70848410
chr19 41816972 41816984 MEF2A JASPAR yes 41816094 878 70848411
chr19 41816972 41816984 MEF2B JASPAR yes 41816094 878 70848412
chr19 41816972 41816984 MEF2D JASPAR yes 41816094 878 70848413
chr19 41816973 41816983 MEF2A JASPAR yes 41816094 879 70848414
chr19 41816976 41816992 POU4F3 JASPAR yes 41816094 882 70848415
chr19 41816978 41816992 POU4F1 JASPAR yes 41816094 884 70848416
chr19 41816978 41816993 HNF1A JASPAR yes 41816094 884 70848417
chr19 41816980 41816986 TBP TRANSFAC yes 41816094 886 70848418
chr19 41816989 41816992 MYB TRANSFAC yes 41816094 895 70848419
chr19 41816994 41817000 TBP TRANSFAC yes 41816094 900 70848420
chr19 41817008 41817022 MTF1 JASPAR yes 41816094 914 70848421
chr19 41817022 41817033 E2F6 JASPAR yes 41816094 928 70848422
chr19 41819293 41819298 ATF1 TRANSFAC yes 41816094 3199 70848423
chr19 41819326 41819338 PKNOX1 JASPAR yes 41816094 3232 70848424
chr19 41819326 41819338 TGIF1 JASPAR yes 41816094 3232 70848425
chr19 41819326 41819338 TGIF2 JASPAR yes 41816094 3232 70848426
chr19 41819330 41819348 NFYA JASPAR yes 41816094 3236 70848427
chr19 41819331 41819345 IRF8 JASPAR yes 41816094 3237 70848428
chr19 41819331 41819346 IRF9 JASPAR yes 41816094 3237 70848429
chr19 41819336 41819349 DUXA JASPAR yes 41816094 3242 70848430
chr19 41819346 41819367 ZNF263 JASPAR yes 41816094 3252 70848431
chr19 41819360 41819365 ETS2 TRANSFAC yes 41816094 3266 70848432
chr19 41819362 41819370 EHF JASPAR yes 41816094 3268 70848433
chr19 41819372 41819384 INSM1 JASPAR yes 41816094 3278 70848434
chr19 41819372 41819387 NR2C2 JASPAR yes 41816094 3278 70848435
chr19 41819377 41819388 ESRRA JASPAR yes 41816094 3283 70848436
chr19 41819438 41819454 T JASPAR yes 41816094 3344 70848437
chr19 41819439 41819449 CLOCK JASPAR yes 41816094 3345 70848438
chr19 41819449 41819461 PKNOX1 JASPAR yes 41816094 3355 70848439
chr19 41819449 41819461 PKNOX2 JASPAR yes 41816094 3355 70848440
chr19 41819449 41819461 TGIF1 JASPAR yes 41816094 3355 70848441
chr19 41819449 41819461 TGIF2 JASPAR yes 41816094 3355 70848442
chr19 41819449 41819464 SCRT1 JASPAR yes 41816094 3355 70848443
chr19 41819450 41819457 USF2 TRANSFAC yes 41816094 3356 70848444
chr19 41819451 41819465 RXRB JASPAR yes 41816094 3357 70848445
chr19 41819452 41819457 USF2 TRANSFAC yes 41816094 3358 70848446
chr19 41819470 41819476 MZF1 JASPAR yes 41816094 3376 70848447
chr19 41819471 41819491 RREB1 JASPAR yes 41816094 3377 70848448
chr19 41819476 41819486 SP1 JASPAR yes 41816094 3382 70848449
SNPs associated with CCDC97[ENSG00000142039.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of CCDC97[ENSG00000142039.3]
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Genomic Location chr19:41816094-41830788[+]
TSS 41816094
Gene Name CCDC97
Ensembl ID ENSG00000142039.3
ENTREZID 90324
Uniprot
Q96F63
Protein Name
Coiled-coil domain-containing protein 97
Expression levels of CCDC97[ENSG00000142039.3]
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