EnhancerDB
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Enhancers that regulate SLC44A3[ENSG00000143036.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 95184005 95189115 enh47215 95285898 96783
Thymus
chr1 95186012 95186295 vista2564 95285898 99603
VISTA
chr1 95186895 95187156 vista2565 95285898 98742
VISTA
chr1 95189248 95198135 enh12078 95285898 87763
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myotube) Uterus Stomach
chr1 95189546 95189834 vista2566 95285898 96064
VISTA
chr1 95191212 95191391 vista2567 95285898 94507
VISTA
chr1 95193393 95193837 vista2568 95285898 92061
VISTA
chr1 95198805 95207813 enh12079 95285898 78085
Brain (SK-N-MC) Ovary Lung (PC-9) Stomach Muscle (A673) Placenta Breast Muscle (Myoblast) Pancreas Spleen Thymus Kidney
chr1 95210525 95214735 enh12080 95285898 71163
Placenta Stomach
chr1 95217145 95227055 enh12081 95285898 58843
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas Spleen Uterus Heart
chr1 95221261 95221551 vista2569 95285898 64347
VISTA
chr1 95233265 95241955 enh26976 95285898 43943
Liver (HepG2) Large Intestine Astrocyte Stomach Colon (HCT116) Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
chr1 95242445 95246595 enh108353 95285898 39303
Lung (PC-9)
chr1 95246945 95251915 enh26977 95285898 33983
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Stomach Breast Lung (PC-9) Pancreas Uterus Heart
chr1 95248599 95248610 vista2570 95285898 37288
VISTA
chr1 95249173 95249377 vista2571 95285898 36521
VISTA
chr1 95254882 95276775 enh12082 95285898 9123
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
chr1 95256087 95256223 vista2572 95285898 29675
VISTA
chr1 95258204 95258621 vista2573 95285898 27277
VISTA
chr1 95260997 95261398 vista2574 95285898 24500
VISTA
chr1 95263833 95264301 vista2575 95285898 21597
VISTA
chr1 95264854 95265185 vista2576 95285898 20713
VISTA
chr1 95267524 95267667 vista2577 95285898 18231
VISTA
chr1 95276451 95276463 vista2578 95285898 9435
VISTA
chr1 95311245 95322815 enh12083 95285898 25347
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Astrocyte Stomach Placenta Muscle (Myoblast) Pancreas Uterus Heart
chr1 95326006 95326167 vista2579 95285898 40108
VISTA
chr1 95331900 95332266 vista2580 95285898 46002
VISTA
chr1 95334685 95344303 enh26978 95285898 48787
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Muscle (Myoblast) Uterus
chr1 95346985 95354190 enh12084 95285898 61087
Liver (HepG2) Brain (SK-N-SH) Ovary Astrocyte Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Stomach
chr1 95370085 95380455 enh67063 95285898 84187
Brain (SK-N-MC) Muscle (A673) Uterus Neural Stem Cells (H9) Stomach
chr1 95383345 95390775 enh92089 95285898 97447
Liver (HepG2) Uterus Stomach
Transcript facotrs that regulate SLC44A3[ENSG00000143036.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SLC44A3[ENSG00000143036.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 95274052 rs397713833 G GT 11846 Pancreas 1.52413e-21 498944
chr1 95258355 rs7522002 T G 27543 Spleen 0.116057 498761
Details of SLC44A3[ENSG00000143036.12]
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Genomic Location chr1:95285898-95360802[+]
TSS 95285898
Gene Name SLC44A3
Ensembl ID ENSG00000143036.12
ENTREZID 126969
Uniprot
E9PIC5
B4DTF4
Q8N4M1
Protein Name
Choline transporter-like protein 3
Expression levels of SLC44A3[ENSG00000143036.12]
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