EnhancerDB
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  3. SNAPIN[ENSG00000143553.6]
Enhancers that regulate SNAPIN[ENSG00000143553.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 153541018 153541368 vista3343 153631130 89762
VISTA
chr1 153545866 153546049 vista3344 153631130 85081
VISTA
chr1 153548105 153553735 enh12270 153631130 77395
Skin (Keratinocyte) Cervix (HeLa-S3) Esophagus Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myotube)
chr1 153549643 153549828 vista3345 153631130 81302
VISTA
chr1 153558585 153562735 enh12271 153631130 68395
Placenta
chr1 153563285 153567435 enh109353 153631130 63695
Stomach
chr1 153567604 153573987 enh628 153631130 57143
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
chr1 153579201 153583975 enh12272 153631130 47155
Placenta Bone (Osteoblast)
chr1 153583449 153583810 vista3346 153631130 47320
VISTA
chr1 153584539 153584862 vista3347 153631130 46268
VISTA
chr1 153616165 153624748 enh12273 153631130 6382
Bone Marrow (K562) Blood (T-cell) Placenta Colon (HCT116) Pancreas Muscle (Myotube) Thymus
chr1 153667305 153673887 enh12274 153631130 36175
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Bone (Osteoblast) Stomach Placenta Uterus Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 153670755 153671012 vista3348 153631130 39625
VISTA
chr1 153671679 153672046 vista3349 153631130 40549
VISTA
chr1 153676065 153683955 enh12275 153631130 44935
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Colon (HCT116) Epithelial (MCF-7)
chr1 153697963 153709075 enh61908 153631130 66833
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Thyroid Colon (HCT116) Lung (PC-9) Stomach
chr1 153702935 153703414 vista3350 153631130 71805
VISTA
chr1 153704694 153704943 vista3351 153631130 73564
VISTA
chr1 153714312 153722711 enh64109 153631130 83182
Peripheral Blood (MM.1S) Neural Stem Cells (H9) Heart
chr1 153714845 153715049 vista3352 153631130 83715
VISTA
chr1 153715466 153715694 vista3353 153631130 84336
VISTA
chr1 153716388 153716727 vista3354 153631130 85258
VISTA
chr1 153718129 153718295 vista3355 153631130 86999
VISTA
Transcript facotrs that regulate SNAPIN[ENSG00000143553.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SNAPIN[ENSG00000143553.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 154433897 rs147140395 G A 799591 Esophagus 0.270575 638929
chr1 153582258 rs9660679 T C 48872 Esophagus 0.0540539 635395
chr1 153467595 rs116326447 T C 163535 Heart 0.317351 634281
chr1 153583986 rs9699949 G C 47144 Heart 0.181591 635415
chr1 153457385 rs3014848 G A 173745 Spleen 0.127182 634115
chr1 153548220 rs147187919 T C 82910 Uterus 0.0348224 635131
chr1 153550461 rs74660920 C T 80669 Thyroid 0.0225627 635158
chr1 154390932 rs79794939 C T 756626 Stomach 0.213608 638558
Details of SNAPIN[ENSG00000143553.6]
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Genomic Location chr1:153631130-153634306[+]
TSS 153631130
Gene Name SNAPIN
Ensembl ID ENSG00000143553.6
ENTREZID 23557
Uniprot
O95295
Protein Name
SNARE-associated protein Snapin
Expression levels of SNAPIN[ENSG00000143553.6]
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