EnhancerDB
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Enhancers that regulate CNIH4[ENSG00000143771.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 224437445 224456975 enh12717 224544552 87577
Cervix (HeLa-S3) Muscle (A673) Placenta Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 224458940 224459060 vista5294 224544552 85492
VISTA
chr1 224528791 224528972 vista5295 224544552 15580
VISTA
chr1 224545542 224546006 vista5296 224544552 990
VISTA
chr1 224567685 224571835 enh948 224544552 23133
Blood (Karpas-422)
chr1 224593326 224597975 enh27576 224544552 48774
Prostate (PC-3) Prostate (RWPE1) Liver Astrocyte Colon (HCT116) Lung (PC-9) Stomach
chr1 224598124 224598418 vista5297 224544552 53572
VISTA
chr1 224613085 224617275 enh79404 224544552 68533
Prostate (PC-3) Stomach
chr1 224633023 224649015 enh12718 224544552 88471
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 224633276 224633598 vista5298 224544552 88724
VISTA
chr1 224635065 224635439 vista5299 224544552 90513
VISTA
Transcript facotrs that regulate CNIH4[ENSG00000143771.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 224542257 224545597 ZNF274 GTRD no Bone Marrow (K562) 224544552 1045 107873724
chr1 224544307 224545631 POLR2A UCSC Txn Factor no Conserved 224544552 245 107873725
chr1 224545295 224545626 ZNF274 GTRD no Liver (HepG2) 224544552 743 107873726
chr1 224545435 224545759 CEBPB UCSC Txn Factor no Conserved 224544552 883 107873727
chr1 224545435 224545759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 224544552 883 107873728
chr1 224545458 224545682 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 224544552 906 107873729
chr1 224545476 224545732 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 224544552 924 107873730
chr1 224545496 224545690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 224544552 944 107873731
chr1 224545506 224545881 STAT1 UCSC Txn Factor no Conserved 224544552 954 107873732
chr1 224545506 224545881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 224544552 954 107873733
chr1 224545514 224545858 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 224544552 962 107873734
chr1 224545567 224545573 SOX10 JASPAR yes 224544552 1015 118468087
chr1 224545587 224545598 CEBPB JASPAR yes 224544552 1035 118468088
chr1 224545593 224545597 H1TF2 TRANSFAC yes 224544552 1041 118468089
chr1 224545593 224545597 NFE TRANSFAC yes 224544552 1041 118468090
chr1 224545593 224545597 SRF TRANSFAC yes 224544552 1041 118468091
chr1 224545602 224545613 CEBPB JASPAR yes 224544552 1050 118468092
chr1 224545603 224545614 CEBPA JASPAR yes 224544552 1051 118468093
chr1 224545620 224545627 NKX3-1 JASPAR yes 224544552 1068 118468094
chr1 224545622 224545632 EMX1 JASPAR yes 224544552 1070 118468095
chr1 224545622 224545632 GBX2 JASPAR yes 224544552 1070 118468096
chr1 224545622 224545632 GSX1 JASPAR yes 224544552 1070 118468097
chr1 224545622 224545632 GSX2 JASPAR yes 224544552 1070 118468098
chr1 224545622 224545632 HOXB2 JASPAR yes 224544552 1070 118468099
chr1 224545622 224545632 HOXB3 JASPAR yes 224544552 1070 118468100
chr1 224545622 224545632 MEOX1 JASPAR yes 224544552 1070 118468101
chr1 224545622 224545632 MEOX2 JASPAR yes 224544552 1070 118468102
chr1 224545622 224545632 MIXL1 JASPAR yes 224544552 1070 118468103
chr1 224545622 224545632 MNX1 JASPAR yes 224544552 1070 118468104
chr1 224545622 224545633 HOXA10 JASPAR yes 224544552 1070 118468105
chr1 224545623 224545631 LMX1A JASPAR yes 224544552 1071 118468106
chr1 224545623 224545631 LMX1B JASPAR yes 224544552 1071 118468107
chr1 224545623 224545631 NKX6-1 JASPAR yes 224544552 1071 118468108
chr1 224545623 224545631 NKX6-2 JASPAR yes 224544552 1071 118468109
chr1 224545623 224545631 PDX1 JASPAR yes 224544552 1071 118468110
chr1 224545623 224545631 VAX1 JASPAR yes 224544552 1071 118468111
chr1 224545623 224545631 VAX2 JASPAR yes 224544552 1071 118468112
chr1 224545623 224545631 VSX1 JASPAR yes 224544552 1071 118468113
chr1 224545624 224545635 FOXB1 JASPAR yes 224544552 1072 118468114
chr1 224545624 224545635 PHOX2A JASPAR yes 224544552 1072 118468115
chr1 224545624 224545635 PROP1 JASPAR yes 224544552 1072 118468116
chr1 224545627 224545637 MEF2A JASPAR yes 224544552 1075 118468117
chr1 224545632 224545636 TEAD2 TRANSFAC yes 224544552 1080 118468118
chr1 224545660 224545664 YY1 TRANSFAC yes 224544552 1108 118468119
chr1 224545665 224545679 STAT1 JASPAR yes 224544552 1113 118468120
chr1 224545668 224545686 SRF JASPAR yes 224544552 1116 118468121
chr1 224545669 224545674 ETS2 TRANSFAC yes 224544552 1117 118468122
chr1 224545670 224545687 BCL6B JASPAR yes 224544552 1118 118468123
chr1 224545671 224545686 STAT1 JASPAR yes 224544552 1119 118468124
chr1 224545673 224545684 STAT1 JASPAR yes 224544552 1121 118468125
chr1 224545673 224545684 STAT3 JASPAR yes 224544552 1121 118468126
chr1 224545682 224545692 MAX JASPAR yes 224544552 1130 118468127
chr1 224545688 224545703 SCRT1 JASPAR yes 224544552 1136 118468128
chr1 224545692 224545698 PTF TRANSFAC yes 224544552 1140 118468129
chr1 224545700 224545713 DUXA JASPAR yes 224544552 1148 118468130
chr1 224545704 224545714 GSC2 JASPAR yes 224544552 1152 118468131
chr1 224545705 224545713 OTX1 JASPAR yes 224544552 1153 118468132
chr1 224545705 224545713 OTX2 JASPAR yes 224544552 1153 118468133
chr1 224545715 224545719 YY1 TRANSFAC yes 224544552 1163 118468134
chr1 224545721 224545736 TP53 JASPAR yes 224544552 1169 118468135
chr1 224545731 224545741 GCM2 JASPAR yes 224544552 1179 118468136
chr1 224545744 224545749 GATA2 JASPAR yes 224544552 1192 118468137
chr1 224545772 224545787 STAT2 JASPAR yes 224544552 1220 118468138
chr1 224545773 224545787 STAT1 JASPAR yes 224544552 1221 118468139
chr1 224545776 224545790 POU4F1 JASPAR yes 224544552 1224 118468140
chr1 224545779 224545783 YY1 TRANSFAC yes 224544552 1227 118468141
chr1 224545789 224545800 FOXH1 JASPAR yes 224544552 1237 118468142
chr1 224545797 224545808 SPDEF JASPAR yes 224544552 1245 118468143
chr1 224545820 224545832 SRF JASPAR yes 224544552 1268 118468144
chr1 224545837 224545842 H4TF1 TRANSFAC yes 224544552 1285 118468145
chr1 224545837 224545848 ELF5 JASPAR yes 224544552 1285 118468146
chr1 224545837 224545849 EHF JASPAR yes 224544552 1285 118468147
chr1 224545837 224545849 ELF1 JASPAR yes 224544552 1285 118468148
chr1 224545837 224545850 ELF1 JASPAR yes 224544552 1285 118468149
chr1 224545838 224545846 FEV JASPAR yes 224544552 1286 118468150
chr1 224545845 224545849 ESR1 TRANSFAC yes 224544552 1293 118468151
chr1 224545857 224545863 TCF4 TRANSFAC yes 224544552 1305 118468152
chr1 224545868 224545872 YY1 TRANSFAC yes 224544552 1316 118468153
chr1 224545871 224545875 YY1 TRANSFAC yes 224544552 1319 118468154
chr1 224545896 224545911 MEF2C JASPAR yes 224544552 1344 118468155
chr1 224545899 224545909 MEF2A JASPAR yes 224544552 1347 118468156
chr1 224545905 224545923 NR3C1 JASPAR yes 224544552 1353 118468157
chr1 224545906 224545914 FEV JASPAR yes 224544552 1354 118468158
chr1 224545910 224545922 FOXI1 JASPAR yes 224544552 1358 118468159
chr1 224545912 224545920 FOXG1 JASPAR yes 224544552 1360 118468160
chr1 224545917 224545921 YY1 TRANSFAC yes 224544552 1365 118468161
chr1 224545918 224545926 FEV JASPAR yes 224544552 1366 118468162
chr1 224545969 224545975 NFE2 TRANSFAC yes 224544552 1417 118468163
chr1 224545986 224546001 FOXA1 JASPAR yes 224544552 1434 118468164
chr1 224545987 224545998 FOXB1 JASPAR yes 224544552 1435 118468165
chr1 224545987 224545998 FOXC1 JASPAR yes 224544552 1435 118468166
chr1 224545987 224545999 FOXC2 JASPAR yes 224544552 1435 118468167
chr1 224545987 224546005 NR3C1 JASPAR yes 224544552 1435 118468168
SNPs associated with CNIH4[ENSG00000143771.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 224631870 rs885606 G A 64709 Heart 6.56449e-15 981686
chr1 224544529 rs7517754 A G 23 Breast 3.98694e-13 981432
chr1 224565178 rs6693287 C T 0 Thyroid 1.92331e-32 981469
chr1 224640679 rs112795740 G A 73518 Liver 9.14459e-15 981793
chr1 224590582 rs6426121 T C 23421 Stomach 2.49874e-11 981545
Details of CNIH4[ENSG00000143771.7]
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Genomic Location chr1:224544552-224567161[+]
TSS 224544552
Gene Name CNIH4
Ensembl ID ENSG00000143771.7
ENTREZID 29097
Uniprot
A6NLH6
Q9P003
Protein Name
Protein cornichon homolog 4
Expression levels of CNIH4[ENSG00000143771.7]
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