EnhancerDB
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Enhancers that regulate LHFPL2[ENSG00000145685.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 77953125 77969815 enh38003 78065844 96029
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Astrocyte Blood (GM12878) Stomach Peripheral Blood (MM.1S) Muscle (Myoblast) Uterus Thymus Epithelial (MCF-7)
chr5 77969845 77977575 enh22382 78065844 88269
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Bone (Osteoblast) Stomach Placenta Lung (PC-9) Uterus Epithelial (MCF-7)
chr5 77974245 77974379 vista48167 78065844 91465
VISTA
chr5 77984187 77989407 enh61273 78065844 76437
Neural Stem Cells (H9) Blood (OCI-LY7)
chr5 77990545 78000055 enh22383 78065844 65789
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
chr5 78000725 78004875 enh38004 78065844 60969
Astrocyte
chr5 78011825 78026206 enh48957 78065844 39638
Prostate (PC-3) Liver (HepG2) Large Intestine Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Thymus Stomach
chr5 78013975 78014102 vista48168 78065844 51742
VISTA
chr5 78023887 78024125 vista48169 78065844 41719
VISTA
chr5 78026243 78036915 enh48958 78065844 28929
Thymus Blood (OCI-LY7)
chr5 78038905 78058872 enh8512 78065844 6972
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr5 78054058 78054218 vista48170 78065844 11626
VISTA
chr5 78054356 78054508 vista48171 78065844 11336
VISTA
chr5 78056204 78056542 vista48172 78065844 9302
VISTA
chr5 78085970 78109615 enh22384 78065844 20126
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
chr5 78095218 78095295 vista48173 78065844 29374
VISTA
chr5 78102378 78102749 vista48174 78065844 36534
VISTA
chr5 78112545 78131455 enh48959 78065844 46701
Blood (GM12878) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Uterus Thymus Epithelial (MCF-7)
chr5 78152198 78156603 enh45897 78065844 86354
Muscle (Myoblast) Muscle (Myotube)
Transcript facotrs that regulate LHFPL2[ENSG00000145685.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with LHFPL2[ENSG00000145685.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 78831652 rs115386993 A G 765808 Esophagus 0.19634 8332558
chr5 77793269 rs141957613 ACTTAT A 0 Esophagus 0.229246 8326283
chr5 77138817 rs111778721 C T 642221 Heart 0.23836 8324168
chr5 77940438 rs341927 C T 0 Pancreas 0.0357575 8327900
chr5 77212453 rs355428 G T 568585 Breast 0.189704 8324496
chr5 79008797 rs58902395 A G 942953 Uterus 0.38829 8333617
chr5 77767577 rs17193552 C T 13461 Thyroid 6.17278e-14 8326133
chr5 77788791 rs16875506 A G,T 0 Lung 0.0283098 8326227
Details of LHFPL2[ENSG00000145685.9]
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Genomic Location chr5:77781038-78065844[-]
TSS 78065844
Gene Name LHFPL2
Ensembl ID ENSG00000145685.9
ENTREZID 10184
Uniprot
Q6ZUX7
A0A024RAM8
Protein Name
isoform CRA_a
Lipoma HMGIC fusion partner-like 2
Lipoma HMGIC fusion partner-like 2 protein
Expression levels of LHFPL2[ENSG00000145685.9]
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