EnhancerDB
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Enhancers that regulate C1orf86[ENSG00000162585.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 2056625 2074371 enh11419 2144159 69788
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
chr1 2059932 2059994 vista56 2144159 84165
VISTA
chr1 2068660 2068858 vista57 2144159 75301
VISTA
chr1 2082505 2086655 enh47126 2144159 57504
Thymus
chr1 2082729 2083012 vista58 2144159 61147
VISTA
chr1 2089605 2099975 enh11420 2144159 44184
Placenta Thymus
chr1 2105285 2113235 enh11421 2144159 30924
Muscle (A673) Placenta
chr1 2111429 2112079 vista59 2144159 32080
VISTA
chr1 2118412 2129205 enh11422 2144159 14954
Placenta Brain (SK-N-SH) Blood (T-cell)
chr1 2133045 2138355 enh98420 2144159 5804
Uterus Blood (T-cell)
chr1 2135885 2136186 vista60 2144159 7973
VISTA
chr1 2140151 2140337 vista61 2144159 3822
VISTA
chr1 2162230 2193653 enh11423 2144159 18071
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 2162325 2162996 vista62 2144159 18166
VISTA
chr1 2171824 2171946 vista63 2144159 27665
VISTA
chr1 2172142 2172385 vista64 2144159 27983
VISTA
chr1 2177615 2177829 vista65 2144159 33456
VISTA
chr1 2190530 2190674 vista66 2144159 46371
VISTA
chr1 2194994 2213473 enh11424 2144159 50835
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
chr1 2213745 2234616 enh11425 2144159 69586
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr1 2221868 2222548 vista67 2144159 77709
VISTA
chr1 2230678 2230895 vista68 2144159 86519
VISTA
chr1 2231691 2232185 vista69 2144159 87532
VISTA
chr1 2232428 2232896 vista70 2144159 88269
VISTA
chr1 2238957 2252675 enh11426 2144159 94798
Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Thymus Heart
Transcript facotrs that regulate C1orf86[ENSG00000162585.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 2139253 2140761 ZNF143 GTRD no Epithelial (MCF-7) 2144159 3398 107801811
chr1 2140155 2140159 LFA1 TRANSFAC yes 2144159 4000 118216014
chr1 2140163 2140173 SP1 JASPAR yes 2144159 3986 118216015
chr1 2140165 2140171 MAZ TRANSFAC yes 2144159 3988 118216016
chr1 2140168 2140181 SMAD2 JASPAR yes 2144159 3978 118216017
chr1 2140169 2140174 SP1 TRANSFAC yes 2144159 3985 118216018
chr1 2140180 2140185 SP1 TRANSFAC yes 2144159 3974 118216019
chr1 2140181 2140195 PLAG1 JASPAR yes 2144159 3964 118216020
chr1 2140182 2140193 EBF1 JASPAR yes 2144159 3966 118216021
chr1 2140220 2140232 TFAP2A JASPAR yes 2144159 3927 118216022
chr1 2140220 2140232 TFAP2B JASPAR yes 2144159 3927 118216023
chr1 2140232 2140242 SREBF2 JASPAR yes 2144159 3917 118216024
chr1 2140259 2140264 SP1 TRANSFAC yes 2144159 3895 118216025
chr1 2140262 2140276 STAT1 JASPAR yes 2144159 3883 118216026
chr1 2140267 2140275 FOXO3 JASPAR yes 2144159 3884 118216027
chr1 2140268 2140285 NR3C2 JASPAR yes 2144159 3874 118216028
chr1 2140272 2140278 SOX10 JASPAR yes 2144159 3881 118216029
chr1 2140309 2140319 PAX7 JASPAR yes 2144159 3840 118216030
SNPs associated with C1orf86[ENSG00000162585.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 2110848 rs11587831 T G 5055 Esophagus 3.04565e-14 11587
chr1 2110848 rs11587831 T G 5055 Esophagus 8.27422e-09 11587
chr1 2121037 rs544754432 TGCGGGGGAGCCGAGAGGCGGGGCTGCTG T 0 Esophagus 7.63428e-12 11693
chr1 2121118 rs2503701 C T 0 Heart 5.30294e-13 11696
chr1 2121118 rs2503701 C T 0 Heart 9.35937e-14 11696
chr1 2063472 rs61776567 G A,C,T 52431 Pancreas 3.19747e-07 11092
chr1 2110848 rs11587831 T G 5055 Breast 0.000117803 11587
chr1 2083737 rs2503704 T C 32166 Spleen 2.82071e-07 11277
chr1 2063472 rs61776567 G A,C,T 52431 Ovary 0.00124448 11092
chr1 2110848 rs11587831 T G 5055 Uterus 0.123004 11587
chr1 2121037 rs544754432 TGCGGGGGAGCCGAGAGGCGGGGCTGCTG T 0 Thyroid 2.03898e-12 11693
chr1 2060058 rs28719902 C T 55845 Liver 0.00754594 11032
chr1 2110848 rs11587831 T G 5055 Lung 5.64506e-12 11587
chr1 2060058 rs28719902 C T 55845 Stomach 1.49964e-06 11032
chr1 2121118 rs2503701 C T 0 Adrenal 0.000232784 11696
Details of C1orf86[ENSG00000162585.12]
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Genomic Location chr1:2115903-2144159[-]
TSS 2144159
Gene Name C1orf86
Ensembl ID ENSG00000162585.12
ENTREZID
Uniprot
Protein Name
isoform CRA_c
Chromosome 1 open reading frame 86
Fanconi anemia core complex-associated protein 20
Expression levels of C1orf86[ENSG00000162585.12]
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