EnhancerDB
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Enhancers that regulate PYGO2[ENSG00000163348.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 154834205 154840255 enh47242 154936329 96074
Thymus Stomach
chr1 154847985 154853215 enh87634 154936329 83114
Liver (HepG2) Cervix (HeLa-S3) Liver Pancreas Spleen Uterus
chr1 154854485 154860895 enh90717 154936329 75434
Bone Marrow (K562) Spleen Peripheral Blood (MM.1S) Stomach
chr1 154861945 154866095 enh74380 154936329 70234
Muscle (A673)
chr1 154866105 154870555 enh74381 154936329 65774
Muscle (A673)
chr1 154881469 154887835 enh12280 154936329 48494
Esophagus Placenta Heart
chr1 154899922 154900189 vista3402 154936329 36140
VISTA
chr1 154909685 154916075 enh103105 154936329 20254
Peripheral Blood (MM.1S)
chr1 154910155 154910399 vista3403 154936329 25930
VISTA
chr1 154914634 154915296 vista3404 154936329 21033
VISTA
chr1 154940826 154945730 enh102385 154936329 4497
Bone (Osteoblast)
chr1 154957258 154957622 vista3405 154936329 20929
VISTA
chr1 154972605 154982275 enh12281 154936329 36276
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Thymus Heart
chr1 154972628 154972915 vista3406 154936329 36299
VISTA
chr1 154973036 154973200 vista3407 154936329 36707
VISTA
chr1 154973335 154973935 vista3408 154936329 37006
VISTA
chr1 154977099 154977253 vista3409 154936329 40770
VISTA
chr1 154978035 154978657 vista3410 154936329 41706
VISTA
chr1 154979104 154979305 vista3411 154936329 42775
VISTA
chr1 154982565 154986715 enh646 154936329 46236
Blood (Karpas-422)
chr1 154986150 154986272 vista3412 154936329 49821
VISTA
chr1 154993365 154997515 enh12282 154936329 57036
Placenta
chr1 154997722 154998120 vista3413 154936329 61393
VISTA
Transcript facotrs that regulate PYGO2[ENSG00000163348.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 154940829 154940834 ETS2 TRANSFAC yes 154936329 4500 32325074
chr1 154940834 154940839 GATA2 JASPAR yes 154936329 4505 32325075
chr1 154940839 154940860 ZNF263 JASPAR yes 154936329 4510 32325076
chr1 154940841 154940846 GATA2 JASPAR yes 154936329 4512 32325077
chr1 154940842 154940863 ZNF263 JASPAR yes 154936329 4513 32325078
chr1 154940843 154940864 ZNF263 JASPAR yes 154936329 4514 32325079
chr1 154940846 154940857 FLI1 JASPAR yes 154936329 4517 32325080
chr1 154940846 154940859 ELF3 JASPAR yes 154936329 4517 32325081
chr1 154940847 154940851 YY1 TRANSFAC yes 154936329 4518 32325082
chr1 154940847 154940860 ELF1 JASPAR yes 154936329 4518 32325083
chr1 154940848 154940856 FEV JASPAR yes 154936329 4519 32325084
chr1 154940907 154940910 MYB TRANSFAC yes 154936329 4578 32325085
chr1 154940917 154940931 PLAG1 JASPAR yes 154936329 4588 32325086
chr1 154940918 154940932 PLAG1 JASPAR yes 154936329 4589 32325087
chr1 154940925 154940936 GCM1 JASPAR yes 154936329 4596 32325088
chr1 154940926 154940936 GCM2 JASPAR yes 154936329 4597 32325089
chr1 154940926 154940940 GLIS2 JASPAR yes 154936329 4597 32325090
chr1 154940937 154940951 STAT1 JASPAR yes 154936329 4608 32325091
chr1 154940945 154940949 H4TF2 TRANSFAC yes 154936329 4616 32325092
chr1 154940965 154940977 GRHL1 JASPAR yes 154936329 4636 32325093
chr1 154940968 154940974 PTF TRANSFAC yes 154936329 4639 32325094
chr1 154940971 154940982 FOXA1 JASPAR yes 154936329 4642 32325095
chr1 154940983 154941001 RARA JASPAR yes 154936329 4654 32325096
chr1 154941011 154941026 PRDM1 JASPAR yes 154936329 4682 32325097
chr1 154941024 154941029 NFY TRANSFAC yes 154936329 4695 32325098
chr1 154941026 154941032 NFIC JASPAR yes 154936329 4697 32325099
chr1 154941028 154941038 TEAD4 JASPAR yes 154936329 4699 32325100
chr1 154941029 154941037 TEAD3 JASPAR yes 154936329 4700 32325101
chr1 154941056 154941062 MZF1 JASPAR yes 154936329 4727 32325102
chr1 154941062 154941067 GATA2 JASPAR yes 154936329 4733 32325103
chr1 154941076 154941081 SP1 TRANSFAC yes 154936329 4747 32325104
chr1 154941095 154941115 PPARG JASPAR yes 154936329 4766 32325105
chr1 154941123 154941134 STAT3 JASPAR yes 154936329 4794 32325106
chr1 154941138 154941147 RUNX2 JASPAR yes 154936329 4809 32325107
chr1 154941138 154941148 RUNX3 JASPAR yes 154936329 4809 32325108
chr1 154941138 154941149 RUNX1 JASPAR yes 154936329 4809 32325109
chr1 154941165 154941171 MZF1 JASPAR yes 154936329 4836 32325110
chr1 154941186 154941207 ZNF263 JASPAR yes 154936329 4857 32325111
chr1 154941188 154941194 MZF1 JASPAR yes 154936329 4859 32325112
chr1 154941189 154941203 PLAG1 JASPAR yes 154936329 4860 32325113
chr1 154941189 154941210 ZNF263 JASPAR yes 154936329 4860 32325114
chr1 154941194 154941200 NFE2 TRANSFAC yes 154936329 4865 32325115
chr1 154941197 154941203 SP1 TRANSFAC yes 154936329 4868 32325116
chr1 154941205 154941209 YY1 TRANSFAC yes 154936329 4876 32325117
chr1 154941205 154941220 STAT1 JASPAR yes 154936329 4876 32325118
chr1 154941207 154941218 STAT1 JASPAR yes 154936329 4878 32325119
chr1 154941207 154941218 STAT3 JASPAR yes 154936329 4878 32325120
chr1 154941223 154941227 NFE TRANSFAC yes 154936329 4894 32325121
chr1 154941224 154941229 GATA2 JASPAR yes 154936329 4895 32325122
chr1 154941224 154941238 EBF1 JASPAR yes 154936329 4895 32325123
chr1 154941226 154941232 MZF1 JASPAR yes 154936329 4897 32325124
chr1 154941236 154941257 ZNF263 JASPAR yes 154936329 4907 32325125
chr1 154941243 154941258 PRDM1 JASPAR yes 154936329 4914 32325126
chr1 154941263 154941277 PLAG1 JASPAR yes 154936329 4934 32325127
chr1 154941264 154941279 RFX5 JASPAR yes 154936329 4935 32325128
chr1 154941267 154941288 REST JASPAR yes 154936329 4938 32325129
chr1 154941268 154941282 MTF1 JASPAR yes 154936329 4939 32325130
chr1 154941268 154941287 REST JASPAR yes 154936329 4939 32325131
chr1 154941300 154941306 YY1 JASPAR yes 154936329 4971 32325132
chr1 154941305 154941319 EBF1 JASPAR yes 154936329 4976 32325133
chr1 154941306 154941321 TFAP2C JASPAR yes 154936329 4977 32325134
chr1 154941307 154941318 EBF1 JASPAR yes 154936329 4978 32325135
chr1 154941311 154941316 TFAP2A TRANSFAC yes 154936329 4982 32325136
chr1 154941311 154941317 MZF1 JASPAR yes 154936329 4982 32325137
chr1 154941318 154941338 PPARG JASPAR yes 154936329 4989 32325138
chr1 154941320 154941338 ESR1 JASPAR yes 154936329 4991 32325139
chr1 154941320 154941338 ESR2 JASPAR yes 154936329 4991 32325140
SNPs associated with PYGO2[ENSG00000163348.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 154808959 rs11264272 C T 120543 Heart 0.312014 641193
chr1 154788112 rs13374415 G A 141390 Spleen 0.394345 640916
chr1 154954466 rs183051150 C T 18137 Uterus 0.231231 642174
chr1 154907129 rs72702218 T G 22373 Thyroid 0.0287272 641913
chr1 154802321 rs6668261 C T 127181 Liver 0.0476731 641120
chr1 154765250 rs1702184 G A 164252 Lung 0.161598 640679
chr1 154941593 rs4845401 C G 5264 Stomach 0.367733 642076
chr1 154630053 rs57513218 C T 299449 Adrenal 0.241892 639682
Details of PYGO2[ENSG00000163348.3]
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Genomic Location chr1:154929502-154936329[-]
TSS 154936329
Gene Name PYGO2
Ensembl ID ENSG00000163348.3
ENTREZID 90780
Uniprot
Q9BRQ0
Q5T170
Protein Name
Pygopus homolog 2
Expression levels of PYGO2[ENSG00000163348.3]
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