EnhancerDB
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Enhancers that regulate IGFN1[ENSG00000163395.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 201071545 201075695 enh50139 201159953 84258
Large Intestine
chr1 201084133 201084558 vista4536 201159953 75395
VISTA
chr1 201103985 201111635 enh74472 201159953 48318
Muscle (A673) Uterus Stomach
chr1 201122119 201122123 vista4537 201159953 37830
VISTA
chr1 201128685 201132835 enh103187 201159953 27118
Peripheral Blood (MM.1S)
chr1 201134565 201138935 enh90756 201159953 21018
Bone Marrow (K562)
chr1 201139670 201140154 vista4538 201159953 19799
VISTA
chr1 201160901 201161255 vista4539 201159953 948
VISTA
chr1 201208925 201216415 enh74473 201159953 48972
Muscle (A673) Brain (SK-N-MC)
chr1 201221749 201225935 enh61946 201159953 61796
Esophagus Muscle (A673)
chr1 201226502 201247275 enh12516 201159953 66549
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 201236006 201236165 vista4540 201159953 76053
VISTA
chr1 201244405 201244769 vista4541 201159953 84452
VISTA
chr1 201246115 201246382 vista4542 201159953 86162
VISTA
chr1 201249258 201261175 enh12517 201159953 89305
Prostate (PC-3) Prostate (RWPE1) Placenta Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
Transcript facotrs that regulate IGFN1[ENSG00000163395.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 201160744 201161188 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 201159953 791 107856027
chr1 201160758 201161158 FOS UCSC Txn Factor no Conserved 201159953 805 107856028
chr1 201160774 201161170 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 201159953 821 107856029
chr1 201160834 201161154 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 201159953 881 107856030
chr1 201160841 201161181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 201159953 888 107856031
chr1 201160844 201161114 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 201159953 891 107856032
chr1 201160844 201161128 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 201159953 891 107856033
chr1 201160856 201161136 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 201159953 903 107856034
chr1 201160902 201160923 ZNF263 JASPAR yes 201159953 949 118431312
chr1 201160903 201160924 ZNF263 JASPAR yes 201159953 950 118431313
chr1 201160908 201160919 E2F6 JASPAR yes 201159953 955 118431314
chr1 201160942 201160954 HNF1B JASPAR yes 201159953 989 118431315
chr1 201160953 201160957 H1TF2 TRANSFAC yes 201159953 1000 118431316
chr1 201160953 201160957 NFE TRANSFAC yes 201159953 1000 118431317
chr1 201160953 201160957 SRF TRANSFAC yes 201159953 1000 118431318
chr1 201160953 201160959 NFYC TRANSFAC yes 201159953 1000 118431319
chr1 201160961 201160967 JUN TRANSFAC yes 201159953 1008 118431320
chr1 201160965 201160968 MYB TRANSFAC yes 201159953 1012 118431321
chr1 201160975 201160996 REST JASPAR yes 201159953 1022 118431322
chr1 201160993 201161003 GCM2 JASPAR yes 201159953 1040 118431323
chr1 201160998 201161019 ZNF263 JASPAR yes 201159953 1045 118431324
chr1 201161007 201161012 TFAP2A TRANSFAC yes 201159953 1054 118431325
chr1 201161007 201161013 MZF1 JASPAR yes 201159953 1054 118431326
chr1 201161010 201161024 JUN JASPAR yes 201159953 1057 118431327
chr1 201161012 201161023 BATF JASPAR yes 201159953 1059 118431328
chr1 201161013 201161024 FOSL2 JASPAR yes 201159953 1060 118431329
chr1 201161013 201161024 JUNB JASPAR yes 201159953 1060 118431330
chr1 201161014 201161025 FOS JASPAR yes 201159953 1061 118431331
chr1 201161014 201161025 FOSL1 JASPAR yes 201159953 1061 118431332
chr1 201161014 201161025 JUND JASPAR yes 201159953 1061 118431333
chr1 201161015 201161024 JDP2 JASPAR yes 201159953 1062 118431334
chr1 201161015 201161029 JUN JASPAR yes 201159953 1062 118431335
chr1 201161016 201161027 BATF JASPAR yes 201159953 1063 118431336
chr1 201161022 201161028 GATA3 JASPAR yes 201159953 1069 118431337
chr1 201161041 201161057 SOX4 JASPAR yes 201159953 1088 118431338
chr1 201161052 201161062 ZNF740 JASPAR yes 201159953 1099 118431339
chr1 201161059 201161063 ESR1 TRANSFAC yes 201159953 1106 118431340
chr1 201161107 201161127 RREB1 JASPAR yes 201159953 1154 118431341
chr1 201161108 201161128 RREB1 JASPAR yes 201159953 1155 118431342
chr1 201161108 201161129 ZNF263 JASPAR yes 201159953 1155 118431343
chr1 201161111 201161116 SP1 TRANSFAC yes 201159953 1158 118431344
chr1 201161115 201161120 SP1 TRANSFAC yes 201159953 1162 118431345
chr1 201161116 201161126 SP1 JASPAR yes 201159953 1163 118431346
chr1 201161124 201161129 SP1 TRANSFAC yes 201159953 1171 118431347
chr1 201161129 201161496 ZNF274 GTRD no Bone Marrow (K562) 201159953 1176 107856035
chr1 201161136 201161146 SP1 JASPAR yes 201159953 1183 118431348
chr1 201161139 201161151 INSM1 JASPAR yes 201159953 1186 118431349
chr1 201161162 201161166 H4TF2 TRANSFAC yes 201159953 1209 118431350
chr1 201161184 201161195 E2F6 JASPAR yes 201159953 1231 118431351
chr1 201161184 201161205 ZNF263 JASPAR yes 201159953 1231 118431352
chr1 201161185 201161206 ZNF263 JASPAR yes 201159953 1232 118431353
chr1 201161186 201161201 NR2C2 JASPAR yes 201159953 1233 118431354
chr1 201161188 201161199 E2F6 JASPAR yes 201159953 1235 118431355
chr1 201161197 201161205 EHF JASPAR yes 201159953 1244 118431356
chr1 201161199 201161463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 201159953 1246 107856036
chr1 201161207 201161222 ZIC3 JASPAR yes 201159953 1254 118431357
chr1 201161210 201161466 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 201159953 1257 107856037
chr1 201161235 201161243 USF1 TRANSFAC yes 201159953 1282 118431358
SNPs associated with IGFN1[ENSG00000163395.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 201613348 rs147753113 A G 415268 Esophagus 0.267631 856206
chr1 200236037 rs35849136 T C 923916 Esophagus 0.12237 845834
chr1 201096101 rs75919516 AGCCCT A 63852 Pancreas 1.71996e-15 851112
chr1 201861905 rs181811725 G A,C,T 663825 Breast 0.39821 858011
chr1 200274132 rs12039222 A C 885821 Uterus 0.0582476 846296
chr1 200264764 rs61824895 G A 895189 Thyroid 0.039495 846140
chr1 201137500 rs875495 A G 22453 Lung 1.03888e-09 851386
chr1 202042351 rs148361424 G T 844271 Adrenal 0.0935677 859639
Details of IGFN1[ENSG00000163395.12]
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Genomic Location chr1:201159953-201198080[+]
TSS 201159953
Gene Name IGFN1
Ensembl ID ENSG00000163395.12
ENTREZID 91156
Uniprot
Q86VF2
Protein Name
Immunoglobulin-like and fibronectin type III domain-containing protein 1
Expression levels of IGFN1[ENSG00000163395.12]
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