EnhancerDB
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Enhancers that regulate KRT13[ENSG00000171401.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 39557485 39564854 enh17148 39661957 97103
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
chr17 39567925 39576975 enh17149 39661957 84982
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr17 39572335 39572530 vista24770 39661957 89427
VISTA
chr17 39572748 39572757 vista24771 39661957 89200
VISTA
chr17 39610643 39614687 enh89863 39661957 47270
Prostate (RWPE1)
chr17 39651125 39655275 enh81209 39661957 6682
Prostate (PC-3)
chr17 39653134 39653351 vista24772 39661957 8606
VISTA
chr17 39654597 39654816 vista24773 39661957 7141
VISTA
chr17 39656265 39656585 vista24774 39661957 5372
VISTA
chr17 39662733 39662908 vista24775 39661957 776
VISTA
chr17 39667444 39667684 vista24776 39661957 5487
VISTA
chr17 39682585 39682843 vista24777 39661957 20628
VISTA
chr17 39683248 39683750 vista24778 39661957 21291
VISTA
chr17 39685394 39685532 vista24779 39661957 23437
VISTA
chr17 39686458 39686891 vista24780 39661957 24501
VISTA
chr17 39688905 39708275 enh17150 39661957 26948
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
chr17 39692337 39692600 vista24781 39661957 30380
VISTA
chr17 39695431 39695775 vista24782 39661957 33474
VISTA
chr17 39703664 39703881 vista24783 39661957 41707
VISTA
chr17 39703962 39704520 vista24784 39661957 42005
VISTA
chr17 39705098 39705383 vista24785 39661957 43141
VISTA
chr17 39709405 39718015 enh108667 39661957 47448
Cervix (HeLa-S3) Lung (PC-9)
chr17 39713397 39713795 vista24786 39661957 51440
VISTA
chr17 39731035 39738439 enh17151 39661957 69078
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Placenta Pancreas (Panc1) Epithelial (MCF-7)
chr17 39735892 39736012 vista24787 39661957 73935
VISTA
chr17 39749784 39750088 vista24788 39661957 87827
VISTA
Transcript facotrs that regulate KRT13[ENSG00000171401.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 39655745 39656967 TCF7L2 GTRD no Colon (HCT116) 39661957 4990 108258324
chr17 39656271 39656995 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 39661957 4962 108258328
chr17 39656293 39657076 TCF7L2 GTRD no Colon (HCT116) 39661957 4881 108258331
chr17 39656412 39657056 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 39661957 4901 108258346
chr17 39661849 39662884 ZBTB33 GTRD no Lung (A549) 39661957 108 108258357
chr17 39662022 39664654 ZNF274 GTRD no Bone Marrow (K562) 39661957 65 108258358
chr17 39662309 39662762 ZNF143 GTRD no Epithelial (MCF-7) 39661957 352 108258359
chr17 39662329 39662790 ZBTB33 GTRD no Lung (A549) 39661957 372 108258360
chr17 39662352 39663288 ZNF274 GTRD no Blood (GM12878) 39661957 395 108258361
chr17 39662372 39663270 ZNF274 GTRD no Bone Marrow (K562) 39661957 415 108258362
chr17 39662377 39664477 TCF7L2 GTRD no Colon (HCT116) 39661957 420 108258363
chr17 39662436 39664348 TCF7L2 GTRD no Colon (HCT116) 39661957 479 108258364
chr17 39662448 39662918 ZNF143 GTRD no Epithelial (MCF-7) 39661957 491 108258365
chr17 39662491 39666467 TCF7L2 GTRD no Colon (HCT116) 39661957 534 108258366
chr17 39662498 39663134 ZBTB33 GTRD no Lung (A549) 39661957 541 108258367
chr17 39662571 39664433 TCF7L2 GTRD no Colon (HCT116) 39661957 614 108258368
chr17 39662571 39664649 TCF7L2 GTRD no Colon (HCT116) 39661957 614 108258369
chr17 39662643 39662907 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 39661957 686 108258370
chr17 39662668 39662948 FOXA1 UCSC Txn Factor no Conserved 39661957 711 108258371
chr17 39662668 39662948 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 39661957 711 108258372
chr17 39662669 39663118 TCF7L2 GTRD no Colon (HCT116) 39661957 712 108258373
chr17 39662678 39662968 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 39661957 721 108258374
chr17 39662697 39662897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 39661957 740 108258375
chr17 39662733 39663082 ZNF274 GTRD no Bone Marrow (K562) 39661957 776 108258376
chr17 39662736 39663030 ZNF274 GTRD no Blood (GM12878) 39661957 779 108258377
chr17 39662742 39662756 POU4F1 JASPAR yes 39661957 785 21238023
chr17 39662742 39662758 POU4F3 JASPAR yes 39661957 785 21238024
chr17 39662745 39662749 YY1 TRANSFAC yes 39661957 788 21238025
chr17 39662769 39662783 CREB3 JASPAR yes 39661957 812 21238026
chr17 39662770 39662780 MAX JASPAR yes 39661957 813 21238027
chr17 39662770 39662781 USF1 JASPAR yes 39661957 813 21238028
chr17 39662770 39662781 USF2 JASPAR yes 39661957 813 21238029
chr17 39662770 39662784 XBP1 JASPAR yes 39661957 813 21238030
chr17 39662771 39662781 BHLHE40 JASPAR yes 39661957 814 21238031
chr17 39662771 39662781 BHLHE41 JASPAR yes 39661957 814 21238032
chr17 39662771 39662781 MAX JASPAR yes 39661957 814 21238033
chr17 39662771 39662781 MLXIPL JASPAR yes 39661957 814 21238034
chr17 39662771 39662781 MLX JASPAR yes 39661957 814 21238035
chr17 39662771 39662781 MNT JASPAR yes 39661957 814 21238036
chr17 39662771 39662781 SREBF2 JASPAR yes 39661957 814 21238037
chr17 39662771 39662781 TFE3 JASPAR yes 39661957 814 21238038
chr17 39662771 39662781 TFEB JASPAR yes 39661957 814 21238039
chr17 39662771 39662781 TFEC JASPAR yes 39661957 814 21238040
chr17 39662771 39662782 USF1 JASPAR yes 39661957 814 21238041
chr17 39662772 39662782 MAX JASPAR yes 39661957 815 21238042
chr17 39662773 39662778 MYC TRANSFAC yes 39661957 816 21238043
chr17 39662773 39662778 USF1 TRANSFAC yes 39661957 816 21238044
chr17 39662773 39662778 USF2 TRANSFAC yes 39661957 816 21238045
chr17 39662776 39667641 ZBTB33 GTRD no Lung (A549) 39661957 819 108258378
chr17 39662776 39667641 ZBTB33 GTRD no Lung (A549) 39661957 819 108258379
chr17 39662790 39662804 PAX6 JASPAR yes 39661957 833 21238046
chr17 39662811 39662826 FOXP1 JASPAR yes 39661957 854 21238047
chr17 39662812 39662823 FOXA1 JASPAR yes 39661957 855 21238048
chr17 39662812 39662827 FOXA1 JASPAR yes 39661957 855 21238049
chr17 39662813 39662824 FOXB1 JASPAR yes 39661957 856 21238050
chr17 39662813 39662824 FOXC1 JASPAR yes 39661957 856 21238051
chr17 39662814 39662825 FOXP2 JASPAR yes 39661957 857 21238052
chr17 39662815 39662823 FOXO3 JASPAR yes 39661957 858 21238053
chr17 39662816 39662823 FOXD2 JASPAR yes 39661957 859 21238054
chr17 39662816 39662823 FOXI1 JASPAR yes 39661957 859 21238055
chr17 39662816 39662823 FOXL1 JASPAR yes 39661957 859 21238056
chr17 39662816 39662823 FOXO4 JASPAR yes 39661957 859 21238057
chr17 39662816 39662823 FOXO6 JASPAR yes 39661957 859 21238058
chr17 39662816 39662823 FOXP3 JASPAR yes 39661957 859 21238059
chr17 39662816 39662824 FOXD1 JASPAR yes 39661957 859 21238060
chr17 39662816 39662824 FOXG1 JASPAR yes 39661957 859 21238061
chr17 39662816 39662824 FOXO3 JASPAR yes 39661957 859 21238062
chr17 39662820 39664586 TCF7L2 GTRD no Colon (HCT116) 39661957 863 108258380
chr17 39662822 39662842 TP53 JASPAR yes 39661957 865 21238063
chr17 39662829 39662840 NFKB1 JASPAR yes 39661957 872 21238064
chr17 39662830 39662840 NFKB1 JASPAR yes 39661957 873 21238065
chr17 39662834 39662845 STAT3 JASPAR yes 39661957 877 21238066
chr17 39662835 39662851 ZNF143 JASPAR yes 39661957 878 21238067
chr17 39662840 39662850 TEAD1 JASPAR yes 39661957 883 21238068
chr17 39662840 39662850 TEAD4 JASPAR yes 39661957 883 21238069
chr17 39662840 39662857 ZNF410 JASPAR yes 39661957 883 21238070
chr17 39662841 39662849 TEAD3 JASPAR yes 39661957 884 21238071
chr17 39662853 39662857 H4TF2 TRANSFAC yes 39661957 896 21238072
chr17 39662861 39663561 ZBTB33 GTRD no Lung (A549) 39661957 904 108258381
chr17 39662866 39663512 ZNF143 GTRD no Epithelial (MCF-7) 39661957 909 108258382
chr17 39662873 39662883 EN2 JASPAR yes 39661957 916 21238073
chr17 39662873 39662883 ESX1 JASPAR yes 39661957 916 21238074
chr17 39662873 39662883 HESX1 JASPAR yes 39661957 916 21238075
chr17 39662879 39663593 ZBTB33 GTRD no Lung (A549) 39661957 922 108258383
chr17 39662902 39662905 MYB TRANSFAC yes 39661957 945 21238076
chr17 39663021 39667561 ZBTB33 GTRD no Lung (A549) 39661957 1064 108258384
chr17 39663489 39668956 ZNF274 GTRD no Blood (GM12878) 39661957 1532 108258385
chr17 39663625 39667826 ZBTB33 GTRD no Lung (A549) 39661957 1668 108258386
chr17 39664707 39669020 ZNF274 GTRD no Bone Marrow (K562) 39661957 2750 108258387
chr17 39665327 39668088 ZBTB33 GTRD no Lung (A549) 39661957 3370 108258388
chr17 39665656 39668087 ZBTB33 GTRD no Lung (A549) 39661957 3699 108258389
chr17 39665780 39667906 ZNF274 GTRD no Bone Marrow (K562) 39661957 3823 108258390
chr17 39665824 39668088 ZNF274 GTRD no Bone Marrow (K562) 39661957 3867 108258391
chr17 39665942 39669277 ZNF274 GTRD no Bone Marrow (K562) 39661957 3985 108258392
chr17 39666182 39667845 ZNF274 GTRD no Liver (HepG2) 39661957 4225 108258393
chr17 39666183 39667621 ZNF274 GTRD no Cervix (HeLa-S3) 39661957 4226 108258394
chr17 39666203 39667503 TCF7L2 GTRD no Colon (HCT116) 39661957 4246 108258395
chr17 39666242 39667541 ZBTB33 GTRD no Lung (A549) 39661957 4285 108258396
chr17 39666295 39667785 ZNF274 GTRD no Cervix (HeLa-S3) 39661957 4338 108258397
chr17 39666340 39668844 ZNF274 GTRD no Bone Marrow (K562) 39661957 4383 108258398
chr17 39666348 39668042 ZNF274 GTRD no Bone Marrow (K562) 39661957 4391 108258399
chr17 39666372 39668995 ZNF274 GTRD no Bone Marrow (K562) 39661957 4415 108258400
chr17 39666412 39667962 ZNF274 GTRD no Blood (GM12878) 39661957 4455 108258401
chr17 39666421 39667491 ZNF274 GTRD no Cervix (HeLa-S3) 39661957 4464 108258402
chr17 39666433 39668167 ZBTB33 GTRD no Lung (A549) 39661957 4476 108258403
chr17 39666505 39667704 ZNF274 GTRD no Bone Marrow (K562) 39661957 4548 108258404
chr17 39666545 39669081 ZNF274 GTRD no Bone Marrow (K562) 39661957 4588 108258405
chr17 39666553 39667988 ZNF274 GTRD no Bone Marrow (K562) 39661957 4596 108258406
chr17 39666598 39668047 ZNF274 GTRD no Bone Marrow (K562) 39661957 4641 108258407
chr17 39666620 39668948 ZNF274 GTRD no Bone Marrow (K562) 39661957 4663 108258408
chr17 39666640 39668857 ZNF274 GTRD no Bone Marrow (K562) 39661957 4683 108258409
chr17 39666666 39668002 ZNF274 GTRD no Bone Marrow (K562) 39661957 4709 108258410
chr17 39666676 39667841 ZNF274 GTRD no Bone Marrow (K562) 39661957 4719 108258411
chr17 39666684 39668813 TCF7L2 GTRD no Colon (HCT116) 39661957 4727 108258412
chr17 39666699 39668110 ZNF274 GTRD no Bone Marrow (K562) 39661957 4742 108258413
chr17 39666711 39667938 ZNF274 GTRD no Bone Marrow (K562) 39661957 4754 108258414
chr17 39666742 39668001 ZNF274 GTRD no Bone Marrow (K562) 39661957 4785 108258415
chr17 39666743 39668125 ZNF274 GTRD no Bone Marrow (K562) 39661957 4786 108258416
chr17 39666747 39669031 ZNF274 GTRD no Bone Marrow (K562) 39661957 4790 108258417
chr17 39666756 39667660 ZNF274 GTRD no Bone Marrow (K562) 39661957 4799 108258418
chr17 39666770 39668036 TCF7L2 GTRD no Colon (HCT116) 39661957 4813 108258419
chr17 39666795 39669018 ZNF274 GTRD no Bone Marrow (K562) 39661957 4838 108258420
chr17 39666800 39669094 ZNF274 GTRD no Bone Marrow (K562) 39661957 4843 108258421
chr17 39666819 39668953 ZNF274 GTRD no Bone Marrow (K562) 39661957 4862 108258422
chr17 39666838 39667941 ZNF274 GTRD no Bone Marrow (K562) 39661957 4881 108258423
chr17 39666850 39668077 ZNF274 GTRD no Bone Marrow (K562) 39661957 4893 108258424
chr17 39666887 39668908 ZNF274 GTRD no Bone Marrow (K562) 39661957 4930 108258425
chr17 39666888 39667971 ZNF274 GTRD no Bone Marrow (K562) 39661957 4931 108258426
chr17 39666908 39669204 ZNF274 GTRD no Bone Marrow (K562) 39661957 4951 108258427
SNPs associated with KRT13[ENSG00000171401.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 39614186 rs58396426 C T 43047 Heart 0.359639 4872769
chr17 39954291 rs6503666 G A 292334 Uterus 0.337407 4875402
chr17 39710846 rs1455528 C G 48889 Thyroid 0.073885 4873566
chr17 39232176 rs9900478 T C 425057 Liver 0.169648 4871402
chr17 39113893 rs76393490 C T 543340 Lung 0.0357417 4870772
chr17 40236231 rs112454976 G C 574274 Stomach 0.425581 4876466
chr17 39859769 rs146856513 G A 197812 Adrenal 0.196546 4874833
Details of KRT13[ENSG00000171401.10]
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Genomic Location chr17:39657233-39661957[-]
TSS 39661957
Gene Name KRT13
Ensembl ID ENSG00000171401.10
ENTREZID 3860
Uniprot
A1A4E9
P13646
Protein Name
type I cytoskeletal 13
Keratin
Keratin 13
Expression levels of KRT13[ENSG00000171401.10]
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