EnhancerDB
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Enhancers that regulate TMEM106A[ENSG00000184988.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 41283945 41296395 enh60671 41363854 67459
Pancreas Liver (HepG2) Blood (OCI-LY7)
chr17 41303305 41307455 enh91157 41363854 56399
Bone Marrow (K562)
chr17 41320999 41326475 enh102568 41363854 37379
Bone (Osteoblast)
chr17 41324260 41324525 vista24838 41363854 39329
VISTA
chr17 41333565 41338195 enh101501 41363854 25659
Thyroid
chr17 41373562 41377622 enh89864 41363854 9708
Prostate (RWPE1)
chr17 41378945 41389375 enh86250 41363854 15091
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Stomach
chr17 41390045 41397335 enh4418 41363854 26191
Bone Marrow (K562) Prostate (RWPE1) Blood (Karpas-422) Uterus Stomach
chr17 41397773 41404212 enh48037 41363854 33919
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (OCI-LY7) Stomach Muscle (A673) Breast Uterus Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 41409196 41409569 vista24839 41363854 45342
VISTA
chr17 41409225 41414464 enh60672 41363854 45371
Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Uterus Pancreas Neural Stem Cells (H9)
chr17 41410079 41410140 vista24840 41363854 46225
VISTA
chr17 41417105 41421375 enh32198 41363854 53251
Astrocyte Prostate (PC-3) Bone (Osteoblast)
chr17 41421158 41421352 vista24841 41363854 57304
VISTA
chr17 41426265 41431415 enh52506 41363854 62411
Bone Marrow (K562) Prostate (PC-3) Large Intestine
chr17 41428275 41428596 vista24842 41363854 64421
VISTA
chr17 41431865 41453035 enh4419 41363854 68011
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
chr17 41441650 41441788 vista24843 41363854 77796
VISTA
chr17 41459789 41468695 enh52507 41363854 95935
Liver (HepG2) Prostate (RWPE1) Large Intestine Esophagus Blood (GM12878) Lung (A549) Uterus
Transcript facotrs that regulate TMEM106A[ENSG00000184988.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with TMEM106A[ENSG00000184988.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 41449294 rs7223460 T A 77233 Esophagus 0.0016848 4882887
chr17 41173226 rs9915489 A T 190628 Esophagus 0.0368889 4881202
chr17 40595927 rs12603201 C T 767927 Heart 0.257964 4878838
chr17 41437398 rs9891977 A G 65337 Heart 0.0265339 4882623
chr17 41511929 rs4792993 T G 139868 Thyroid 0.00176579 4883420
chr17 41167957 rs455055 C A 195897 Liver 0.0282349 4881146
chr17 41443014 rs11080034 T C 70953 Lung 0.000978985 4882750
chr17 41160329 rs143166530 G A,C 203525 Stomach 0.157133 4881129
chr17 42206470 rs72822665 A G 834409 Adrenal 0.416064 4888154
Details of TMEM106A[ENSG00000184988.4]
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Genomic Location chr17:41363854-41372061[+]
TSS 41363854
Gene Name TMEM106A
Ensembl ID ENSG00000184988.4
ENTREZID 113277
Uniprot
B7Z779
Q96A25
Protein Name
Transmembrane protein 106A
Expression levels of TMEM106A[ENSG00000184988.4]
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