EnhancerDB
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Enhancers that regulate OPTC[ENSG00000188770.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 203363045 203367195 enh98597 203463271 96076
Uterus
chr1 203367445 203381955 enh12552 203463271 81316
Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Thymus Heart
chr1 203387485 203391635 enh50142 203463271 71636
Large Intestine
chr1 203392845 203397215 enh50143 203463271 66056
Uterus Large Intestine
chr1 203397707 203397716 vista4635 203463271 65555
VISTA
chr1 203398304 203398692 vista4636 203463271 64579
VISTA
chr1 203407885 203428149 enh12553 203463271 35122
Brain (SK-N-MC) Large Intestine Ovary Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Breast Thyroid Pancreas Uterus Stomach
chr1 203417736 203417980 vista4637 203463271 45291
VISTA
chr1 203428760 203439695 enh12554 203463271 23576
Large Intestine Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Uterus Heart
chr1 203445805 203452129 enh12555 203463271 11142
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr1 203471885 203497995 enh12556 203463271 8614
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 203481982 203482534 vista4638 203463271 18711
VISTA
chr1 203489584 203489741 vista4639 203463271 26313
VISTA
chr1 203491011 203491485 vista4640 203463271 27740
VISTA
chr1 203501205 203511475 enh12557 203463271 37934
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
chr1 203506114 203506504 vista4641 203463271 42843
VISTA
chr1 203511661 203530955 enh12558 203463271 48390
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 203524939 203525564 vista4642 203463271 61668
VISTA
chr1 203525711 203525894 vista4643 203463271 62440
VISTA
chr1 203526746 203526853 vista4644 203463271 63475
VISTA
chr1 203536945 203545112 enh12559 203463271 73674
Large Intestine Ovary Astrocyte Bone (Osteoblast) Placenta Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
chr1 203541292 203541507 vista4645 203463271 78021
VISTA
chr1 203547785 203555455 enh12560 203463271 84514
Pancreas Thyroid Placenta Uterus
chr1 203556465 203587575 enh12561 203463271 93194
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 203561987 203562359 vista4646 203463271 98716
VISTA
Transcript facotrs that regulate OPTC[ENSG00000188770.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with OPTC[ENSG00000188770.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 203510048 rs6691427 G C 32056 Esophagus 0.170248 869120
chr1 202819238 rs35847908 A T 644033 Ovary 0.331752 864007
chr1 202779438 rs2275892 G A,C 683833 Uterus 0.345498 863576
Details of OPTC[ENSG00000188770.5]
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Genomic Location chr1:203463271-203477992[+]
TSS 203463271
Gene Name OPTC
Ensembl ID ENSG00000188770.5
ENTREZID 26254
Uniprot
Q9UBM4
Protein Name
Opticin
Expression levels of OPTC[ENSG00000188770.5]
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