EnhancerDB
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Enhancers that regulate CLDN9[ENSG00000213937.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 2963552 2972058 enh58694 3062457 90399
Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Liver Bone (Osteoblast) Colon (HCT116) Pancreas Spleen Uterus
chr16 2972689 2978595 enh47915 3062457 83862
Esophagus Skin (Keratinocyte) Thymus Stomach
chr16 3000735 3006475 enh60573 3062457 55982
Pancreas Blood (OCI-LY7)
chr16 3013245 3013631 vista21591 3062457 48826
VISTA
chr16 3016425 3020575 enh3850 3062457 41882
Blood (Karpas-422)
chr16 3031604 3031823 vista21592 3062457 30634
VISTA
chr16 3031627 3038255 enh44230 3062457 24202
Muscle (Myotube) Heart
chr16 3035586 3035775 vista21593 3062457 26682
VISTA
chr16 3052825 3056975 enh16506 3062457 5482
Placenta
chr16 3053798 3054225 vista21594 3062457 8232
VISTA
chr16 3055976 3056164 vista21595 3062457 6293
VISTA
chr16 3058105 3058264 vista21596 3062457 4193
VISTA
chr16 3060017 3060177 vista21597 3062457 2280
VISTA
chr16 3101365 3105515 enh107661 3062457 38908
Blood (T-cell)
chr16 3114137 3114295 vista21598 3062457 51680
VISTA
chr16 3117605 3129375 enh47916 3062457 55148
Blood (T-cell) Blood (GM12878) Peripheral Blood (MM.1S) Thymus Stomach
chr16 3124961 3125268 vista21599 3062457 62504
VISTA
chr16 3132605 3138655 enh52192 3062457 70148
Large Intestine
chr16 3136218 3136620 vista21600 3062457 73761
VISTA
chr16 3141480 3145630 enh107662 3062457 79023
Blood (T-cell)
chr16 3145997 3146167 vista21601 3062457 83540
VISTA
chr16 3148559 3148729 vista21602 3062457 86102
VISTA
chr16 3156056 3156304 vista21603 3062457 93599
VISTA
chr16 3156518 3156937 vista21604 3062457 94061
VISTA
Transcript facotrs that regulate CLDN9[ENSG00000213937.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 3056290 3060642 ZNF143 GTRD no Epithelial (MCF-7) 3062457 1815 108174058
chr16 3056290 3060642 ZNF143 GTRD no Epithelial (MCF-7) 3062457 1815 108174059
chr16 3056593 3060170 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2287 108174060
chr16 3056593 3060170 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2287 108174061
chr16 3057271 3060710 ZNF274 GTRD no Blood (GM12878) 3062457 1747 108174062
chr16 3057271 3060710 ZNF274 GTRD no Blood (GM12878) 3062457 1747 108174063
chr16 3057388 3058112 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4345 108174064
chr16 3057557 3060656 ZNF143 GTRD no Epithelial (MCF-7) 3062457 1801 108174065
chr16 3057557 3060656 ZNF143 GTRD no Epithelial (MCF-7) 3062457 1801 108174066
chr16 3057604 3059881 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2576 108174067
chr16 3057609 3060200 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2257 108174068
chr16 3057609 3060200 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2257 108174069
chr16 3057674 3060458 TCF7L2 GTRD no Colon (HCT116) 3062457 1999 108174070
chr16 3057674 3060458 TCF7L2 GTRD no Colon (HCT116) 3062457 1999 108174071
chr16 3057719 3058267 ZNF274 GTRD no Bone Marrow (K562) 3062457 4190 108174072
chr16 3057740 3060224 ZNF274 GTRD no Blood (GM12878) 3062457 2233 108174073
chr16 3057740 3060224 ZNF274 GTRD no Blood (GM12878) 3062457 2233 108174074
chr16 3057776 3060090 TCF7L2 GTRD no Colon (HCT116) 3062457 2367 108174075
chr16 3057776 3060090 TCF7L2 GTRD no Colon (HCT116) 3062457 2367 108174076
chr16 3057791 3059159 POLR2A UCSC Txn Factor no Conserved 3062457 3298 108174077
chr16 3057811 3058161 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 4296 108174078
chr16 3057821 3060157 TCF7L2 GTRD no Colon (HCT116) 3062457 2300 108174079
chr16 3057821 3060157 TCF7L2 GTRD no Colon (HCT116) 3062457 2300 108174080
chr16 3057824 3060233 TCF7L2 GTRD no Colon (HCT116) 3062457 2224 108174081
chr16 3057824 3060233 TCF7L2 GTRD no Colon (HCT116) 3062457 2224 108174082
chr16 3057856 3060121 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2336 108174083
chr16 3057856 3060121 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2336 108174084
chr16 3057863 3059033 ZNF274 GTRD no Blood (GM12878) 3062457 3424 108174085
chr16 3057870 3060057 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2400 108174086
chr16 3057870 3060057 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2400 108174087
chr16 3057898 3060007 ZNF274 GTRD no Bone Marrow (K562) 3062457 2450 108174088
chr16 3057901 3060460 ZNF274 GTRD no Bone Marrow (K562) 3062457 1997 108174089
chr16 3057901 3060460 ZNF274 GTRD no Bone Marrow (K562) 3062457 1997 108174090
chr16 3057915 3058121 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 4336 108174091
chr16 3057928 3059923 ZBTB33 GTRD no Lung (A549) 3062457 2534 108174092
chr16 3057938 3059796 TCF7L2 GTRD no Colon (HCT116) 3062457 2661 108174093
chr16 3057939 3060024 ZNF274 GTRD no Bone Marrow (K562) 3062457 2433 108174094
chr16 3057939 3060024 ZNF274 GTRD no Bone Marrow (K562) 3062457 2433 108174095
chr16 3057965 3060156 TCF7L2 GTRD no Colon (HCT116) 3062457 2301 108174096
chr16 3057965 3060156 TCF7L2 GTRD no Colon (HCT116) 3062457 2301 108174097
chr16 3057982 3060227 TCF7L2 GTRD no Colon (HCT116) 3062457 2230 108174098
chr16 3057982 3060227 TCF7L2 GTRD no Colon (HCT116) 3062457 2230 108174099
chr16 3057986 3058376 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4081 108174100
chr16 3057999 3058275 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 4182 108174101
chr16 3057999 3058293 EGR1 UCSC Txn Factor no Conserved 3062457 4164 108174102
chr16 3058006 3059865 TCF7L2 GTRD no Colon (HCT116) 3062457 2592 108174103
chr16 3058010 3058374 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4083 108174104
chr16 3058015 3060206 TCF7L2 GTRD no Colon (HCT116) 3062457 2251 108174105
chr16 3058015 3060206 TCF7L2 GTRD no Colon (HCT116) 3062457 2251 108174106
chr16 3058016 3058386 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4071 108174107
chr16 3058024 3059901 ZNF274 GTRD no Bone Marrow (K562) 3062457 2556 108174108
chr16 3058033 3058443 ZNF274 GTRD no Bone Marrow (K562) 3062457 4014 108174109
chr16 3058040 3058293 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4164 108174110
chr16 3058045 3058919 AR GTRD no Prostate (PC-3) 3062457 3538 108174111
chr16 3058057 3058333 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4124 108174112
chr16 3058060 3059977 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2480 108174113
chr16 3058060 3060077 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2380 108174114
chr16 3058060 3060077 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2380 108174115
chr16 3058065 3058389 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4068 108174116
chr16 3058073 3058743 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3714 108174117
chr16 3058080 3059606 TCF7L2 GTRD no Colon (HCT116) 3062457 2851 108174118
chr16 3058083 3058905 ZNF143 GTRD no Epithelial (MCF-7) 3062457 3552 108174119
chr16 3058085 3058653 EP300 UCSC Txn Factor no Conserved 3062457 3804 108174120
chr16 3058100 3060051 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2406 108174121
chr16 3058100 3060051 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2406 108174122
chr16 3058103 3060281 ZNF274 GTRD no Bone Marrow (K562) 3062457 2176 108174123
chr16 3058103 3060281 ZNF274 GTRD no Bone Marrow (K562) 3062457 2176 108174124
chr16 3058106 3059837 ZNF274 GTRD no Bone Marrow (K562) 3062457 2620 108174125
chr16 3058113 3058133 ESR1 JASPAR yes 3062457 4324 49328999
chr16 3058115 3058135 PPARG JASPAR yes 3062457 4322 49329000
chr16 3058116 3058134 ESR1 JASPAR yes 3062457 4323 49329001
chr16 3058116 3058136 PPARG JASPAR yes 3062457 4321 49329002
chr16 3058117 3058135 ESR2 JASPAR yes 3062457 4322 49329003
chr16 3058118 3058133 ESR2 JASPAR yes 3062457 4324 49329004
chr16 3058118 3058138 ESR1 JASPAR yes 3062457 4319 49329005
chr16 3058120 3058131 NFE2L2 JASPAR yes 3062457 4326 49329006
chr16 3058120 3059563 TCF7L2 GTRD no Colon (HCT116) 3062457 2894 108174126
chr16 3058122 3058326 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4131 108174127
chr16 3058123 3058379 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 4078 108174128
chr16 3058125 3058136 ESRRA JASPAR yes 3062457 4321 49329007
chr16 3058127 3058139 TFAP2B JASPAR yes 3062457 4318 49329008
chr16 3058127 3058139 TFAP2C JASPAR yes 3062457 4318 49329009
chr16 3058127 3058142 TFAP2A JASPAR yes 3062457 4315 49329010
chr16 3058127 3058142 TFAP2C JASPAR yes 3062457 4315 49329011
chr16 3058146 3058767 ZBTB33 GTRD no Lung (A549) 3062457 3690 108174129
chr16 3058149 3058155 NFE2 TRANSFAC yes 3062457 4302 49329012
chr16 3058150 3058170 RREB1 JASPAR yes 3062457 4287 49329013
chr16 3058152 3058172 RREB1 JASPAR yes 3062457 4285 49329014
chr16 3058152 3058848 ZBTB33 GTRD no Lung (A549) 3062457 3609 108174130
chr16 3058153 3058167 PLAG1 JASPAR yes 3062457 4290 49329015
chr16 3058153 3058173 RREB1 JASPAR yes 3062457 4284 49329016
chr16 3058154 3058174 RREB1 JASPAR yes 3062457 4283 49329017
chr16 3058155 3059784 ZNF274 GTRD no Blood (GM12878) 3062457 2673 108174131
chr16 3058156 3058756 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3701 108174132
chr16 3058157 3059041 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3416 108174133
chr16 3058158 3060141 ZNF274 GTRD no Blood (GM12878) 3062457 2316 108174134
chr16 3058158 3060141 ZNF274 GTRD no Blood (GM12878) 3062457 2316 108174135
chr16 3058159 3058169 SP1 JASPAR yes 3062457 4288 49329018
chr16 3058163 3058173 ZNF740 JASPAR yes 3062457 4284 49329019
chr16 3058167 3058499 ZNF274 GTRD no Bone Marrow (K562) 3062457 3958 108174136
chr16 3058168 3060614 ZNF143 GTRD no Epithelial (MCF-7) 3062457 1843 108174137
chr16 3058168 3060614 ZNF143 GTRD no Epithelial (MCF-7) 3062457 1843 108174138
chr16 3058176 3058444 ZNF274 GTRD no Liver (HepG2) 3062457 4013 108174139
chr16 3058178 3059754 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2703 108174140
chr16 3058186 3060036 TCF7L2 GTRD no Colon (HCT116) 3062457 2421 108174141
chr16 3058186 3060036 TCF7L2 GTRD no Colon (HCT116) 3062457 2421 108174142
chr16 3058190 3060040 ZNF274 GTRD no Bone Marrow (K562) 3062457 2417 108174143
chr16 3058190 3060040 ZNF274 GTRD no Bone Marrow (K562) 3062457 2417 108174144
chr16 3058191 3058206 RFX5 JASPAR yes 3062457 4251 49329020
chr16 3058192 3058207 HSF1 JASPAR yes 3062457 4250 49329021
chr16 3058199 3058202 MYB TRANSFAC yes 3062457 4255 49329022
chr16 3058201 3058208 SPI1 JASPAR yes 3062457 4249 49329023
chr16 3058201 3058209 FEV JASPAR yes 3062457 4248 49329024
chr16 3058203 3058208 ETS2 TRANSFAC yes 3062457 4249 49329025
chr16 3058205 3058213 EHF JASPAR yes 3062457 4244 49329026
chr16 3058207 3058212 ETS2 TRANSFAC yes 3062457 4245 49329027
chr16 3058212 3058217 ETS2 TRANSFAC yes 3062457 4240 49329028
chr16 3058212 3058227 RUNX2 JASPAR yes 3062457 4230 49329029
chr16 3058215 3058221 SOX10 JASPAR yes 3062457 4236 49329030
chr16 3058216 3058226 RUNX3 JASPAR yes 3062457 4231 49329031
chr16 3058216 3059717 CTCF GTRD no Spleen 3062457 2740 108174145
chr16 3058220 3058240 ESR1 JASPAR yes 3062457 4217 49329032
chr16 3058221 3058225 ESR1 TRANSFAC yes 3062457 4232 49329033
chr16 3058222 3058232 SREBF1 JASPAR yes 3062457 4225 49329034
chr16 3058222 3058232 SREBF2 JASPAR yes 3062457 4225 49329035
chr16 3058224 3059776 ZNF274 GTRD no Bone Marrow (K562) 3062457 2681 108174146
chr16 3058227 3059773 ZNF274 GTRD no Blood (GM12878) 3062457 2684 108174147
chr16 3058228 3058604 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3853 108174148
chr16 3058229 3060095 ZNF274 GTRD no Liver (HepG2) 3062457 2362 108174149
chr16 3058229 3060095 ZNF274 GTRD no Liver (HepG2) 3062457 2362 108174150
chr16 3058231 3058241 ETV6 JASPAR yes 3062457 4216 49329036
chr16 3058232 3059840 ZNF274 GTRD no Blood (GM12878) 3062457 2617 108174151
chr16 3058233 3058834 ZBTB33 GTRD no Lung (A549) 3062457 3623 108174152
chr16 3058234 3058244 MZF1 JASPAR yes 3062457 4213 49329037
chr16 3058234 3059841 ZNF274 GTRD no Liver (HepG2) 3062457 2616 108174153
chr16 3058235 3058545 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 3062457 3912 108174154
chr16 3058235 3058626 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3831 108174155
chr16 3058243 3058259 E2F2 JASPAR yes 3062457 4198 49329038
chr16 3058245 3060091 ZNF274 GTRD no Bone Marrow (K562) 3062457 2366 108174156
chr16 3058245 3060091 ZNF274 GTRD no Bone Marrow (K562) 3062457 2366 108174157
chr16 3058248 3060006 ZBTB33 GTRD no Lung (A549) 3062457 2451 108174158
chr16 3058250 3058906 ZNF143 GTRD no Epithelial (MCF-7) 3062457 3551 108174159
chr16 3058251 3058575 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3882 108174160
chr16 3058251 3059993 ZNF274 GTRD no Bone Marrow (K562) 3062457 2464 108174161
chr16 3058252 3058772 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3685 108174162
chr16 3058256 3059853 ZNF274 GTRD no Bone Marrow (K562) 3062457 2604 108174163
chr16 3058257 3058260 MYB TRANSFAC yes 3062457 4197 49329039
chr16 3058257 3059136 ZNF143 GTRD no Epithelial (MCF-7) 3062457 3321 108174164
chr16 3058257 3059803 ZNF274 GTRD no Bone Marrow (K562) 3062457 2654 108174165
chr16 3058259 3059988 ZBTB33 GTRD no Lung (A549) 3062457 2469 108174166
chr16 3058260 3058636 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 3821 108174167
chr16 3058289 3060289 ZBTB33 GTRD no Lung (A549) 3062457 2168 108174168
chr16 3058325 3061433 ZNF274 GTRD no Cervix (HeLa-S3) 3062457 1024 108174169
chr16 3058333 3060070 ZBTB33 GTRD no Lung (A549) 3062457 2387 108174170
chr16 3058334 3060258 ZNF274 GTRD no Blood (GM12878) 3062457 2199 108174171
chr16 3058383 3060154 ZNF274 GTRD no Liver (HepG2) 3062457 2303 108174172
chr16 3058470 3060117 ZNF274 GTRD no Bone Marrow (K562) 3062457 2340 108174173
chr16 3058488 3060126 ZNF274 GTRD no Bone Marrow (K562) 3062457 2331 108174174
chr16 3058490 3060225 ZNF274 GTRD no Bone Marrow (K562) 3062457 2232 108174175
chr16 3058506 3060207 ZBTB33 GTRD no Lung (A549) 3062457 2250 108174176
chr16 3058535 3060028 ZNF274 GTRD no Liver (HepG2) 3062457 2429 108174177
chr16 3058586 3060318 ZNF274 GTRD no Liver (HepG2) 3062457 2139 108174178
chr16 3058610 3060200 ZBTB33 GTRD no Lung (A549) 3062457 2257 108174179
chr16 3058652 3060149 ZNF274 GTRD no Bone Marrow (K562) 3062457 2308 108174180
chr16 3058788 3060544 ZNF274 GTRD no Cervix (HeLa-S3) 3062457 1913 108174181
chr16 3058817 3060227 ZNF274 GTRD no Liver (HepG2) 3062457 2230 108174182
chr16 3058820 3060195 ZNF274 GTRD no Bone Marrow (K562) 3062457 2262 108174183
chr16 3058881 3060064 ZBTB33 GTRD no Lung (A549) 3062457 2393 108174184
chr16 3058912 3060053 ZBTB33 GTRD no Lung (A549) 3062457 2404 108174185
chr16 3058919 3060159 ZNF274 GTRD no Liver (HepG2) 3062457 2298 108174186
chr16 3058924 3060035 ZBTB33 GTRD no Lung (A549) 3062457 2422 108174187
chr16 3058939 3060285 ZNF274 GTRD no Liver (HepG2) 3062457 2172 108174188
chr16 3058955 3060278 ZBTB33 GTRD no Lung (A549) 3062457 2179 108174189
chr16 3058974 3060045 ZNF274 GTRD no Liver (HepG2) 3062457 2412 108174190
chr16 3059004 3060153 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2304 108174191
chr16 3059086 3060041 ZNF274 GTRD no Liver (HepG2) 3062457 2416 108174192
chr16 3059131 3060034 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2423 108174193
chr16 3059135 3060033 ZNF143 GTRD no Epithelial (MCF-7) 3062457 2424 108174194
chr16 3059160 3060059 ZNF274 GTRD no Liver (HepG2) 3062457 2398 108174195
chr16 3059228 3060222 ZNF274 GTRD no Cervix (HeLa-S3) 3062457 2235 108174196
chr16 3059479 3060135 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 3062457 2322 108174197
chr16 3059511 3060543 ZNF274 GTRD no Bone Marrow (K562) 3062457 1914 108174198
chr16 3059655 3060208 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2249 108174199
chr16 3059674 3060274 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2183 108174200
chr16 3059679 3060335 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 3062457 2122 108174201
chr16 3059744 3060314 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 3062457 2143 108174202
chr16 3059798 3060174 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2283 108174203
chr16 3059821 3060177 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2280 108174204
chr16 3059840 3060176 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2281 108174205
chr16 3059844 3060168 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2289 108174206
chr16 3059858 3060168 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2289 108174207
chr16 3059867 3060147 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 3062457 2310 108174208
chr16 3059871 3060115 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2342 108174209
chr16 3059874 3060134 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2323 108174210
chr16 3059881 3060351 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 3062457 2106 108174211
chr16 3059882 3060164 SP1 UCSC Txn Factor no Conserved 3062457 2293 108174212
chr16 3059882 3060164 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2293 108174213
chr16 3059887 3060197 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 3062457 2260 108174214
chr16 3059891 3060114 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2343 108174215
chr16 3059895 3060172 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2285 108174216
chr16 3059899 3060081 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2376 108174217
chr16 3059909 3060118 ZNF274 GTRD no Bone Marrow (K562) 3062457 2339 108174218
chr16 3059938 3060102 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 3062457 2355 108174219
chr16 3059940 3060120 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2337 108174220
chr16 3059948 3060081 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 3062457 2376 108174221
chr16 3059966 3060342 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 3062457 2115 108174222
chr16 3059979 3060094 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2363 108174223
chr16 3060034 3060046 INSM1 JASPAR yes 3062457 2411 49329040
chr16 3060054 3060072 ESR1 JASPAR yes 3062457 2385 49329041
chr16 3060057 3060069 INSM1 JASPAR yes 3062457 2388 49329042
chr16 3060067 3060281 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 3062457 2176 108174224
chr16 3060097 3060103 MZF1 JASPAR yes 3062457 2354 49329043
chr16 3060108 3060641 ZNF274 GTRD no Bone Marrow (K562) 3062457 1816 108174225
chr16 3060120 3060135 TFAP2A JASPAR yes 3062457 2322 49329044
chr16 3060120 3060135 TFAP2C JASPAR yes 3062457 2322 49329045
chr16 3060123 3060134 EBF1 JASPAR yes 3062457 2323 49329046
chr16 3060123 3060134 TFAP2A JASPAR yes 3062457 2323 49329047
chr16 3060123 3060134 TFAP2B JASPAR yes 3062457 2323 49329048
chr16 3060123 3060136 TFAP2A JASPAR yes 3062457 2321 49329049
chr16 3060123 3060136 TFAP2B JASPAR yes 3062457 2321 49329050
chr16 3060123 3060136 TFAP2C JASPAR yes 3062457 2321 49329051
chr16 3060124 3060133 TFAP2A JASPAR yes 3062457 2324 49329052
chr16 3060130 3060140 SP1 JASPAR yes 3062457 2317 49329053
chr16 3060130 3060150 ESR1 JASPAR yes 3062457 2307 49329054
SNPs associated with CLDN9[ENSG00000213937.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 4060661 rs2239310 A G 996155 Esophagus 0.1889 4272591
chr16 3054011 rs2524316 C G 8446 Esophagus 0.000604917 4266190
chr16 3059480 rs8055381 G A 2977 Esophagus 1.33831e-11 4266257
chr16 3056563 rs2526270 A G,T 5894 Heart 4.50308e-07 4266225
chr16 3045187 rs398028582 AG A 17270 Heart 0.217129 4266078
chr16 3060543 rs2023913 T C 1914 Breast 0.0600458 4266267
chr16 3006895 rs6500758 A G 55562 Spleen 0.0764258 4265579
chr16 2968595 rs113445844 A C 93862 Liver 0.467164 4265254
chr16 2908703 rs8046218 C T 153754 Stomach 0.153759 4264453
Details of CLDN9[ENSG00000213937.3]
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Genomic Location chr16:3062457-3064506[+]
TSS 3062457
Gene Name CLDN9
Ensembl ID ENSG00000213937.3
ENTREZID 9080
Uniprot
O95484
Protein Name
Claudin-9
Expression levels of CLDN9[ENSG00000213937.3]
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