EnhancerDB
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Enhancers that regulate C19orf24[ENSG00000228300.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 1174025 1184042 enh17839 1275026 90984
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Stomach Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
chr19 1175432 1175562 vista28146 1275026 99464
VISTA
chr19 1183874 1184237 vista28147 1275026 90789
VISTA
chr19 1187565 1198948 enh17840 1275026 76078
Bone Marrow (K562) Blood (T-cell) Bone (Osteoblast) Placenta Colon (HCT116) Thymus
chr19 1189532 1189666 vista28148 1275026 85360
VISTA
chr19 1201505 1220340 enh17841 1275026 54686
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
chr19 1207906 1208235 vista28149 1275026 66791
VISTA
chr19 1213863 1214369 vista28150 1275026 60657
VISTA
chr19 1214932 1215433 vista28151 1275026 59593
VISTA
chr19 1240232 1240534 vista28152 1275026 34492
VISTA
chr19 1252961 1253429 vista28153 1275026 21597
VISTA
chr19 1257265 1269175 enh4952 1275026 5851
Brain (SK-N-SH) Uterus Blood (T-cell) Blood (Karpas-422)
chr19 1260732 1261171 vista28154 1275026 13855
VISTA
chr19 1262305 1262850 vista28155 1275026 12176
VISTA
chr19 1265810 1266064 vista28156 1275026 8962
VISTA
chr19 1266359 1266798 vista28157 1275026 8228
VISTA
chr19 1280981 1281104 vista28158 1275026 5955
VISTA
chr19 1284432 1284856 vista28159 1275026 9406
VISTA
chr19 1289025 1293175 enh52833 1275026 13999
Large Intestine
chr19 1302385 1328100 enh32871 1275026 27359
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Colon (HCT116) Lung (PC-9) Pancreas
chr19 1349665 1353815 enh76093 1275026 74639
Muscle (A673)
chr19 1359245 1363775 enh76094 1275026 84219
Muscle (A673)
Transcript facotrs that regulate C19orf24[ENSG00000228300.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 1256384 1277455 ZNF274 GTRD no Blood (GM12878) 1275026 2429 108352189
chr19 1256384 1277455 ZNF274 GTRD no Blood (GM12878) 1275026 2429 108352190
chr19 1256384 1277455 ZNF274 GTRD no Blood (GM12878) 1275026 2429 108352191
chr19 1256384 1277455 ZNF274 GTRD no Blood (GM12878) 1275026 2429 108352192
chr19 1264074 1272496 ZNF274 GTRD no Blood (GM12878) 1275026 2530 108352729
chr19 1264074 1272496 ZNF274 GTRD no Blood (GM12878) 1275026 2530 108352730
chr19 1264080 1272041 ZBTB33 GTRD no Lung (A549) 1275026 2985 108352731
chr19 1264080 1272041 ZBTB33 GTRD no Lung (A549) 1275026 2985 108352732
chr19 1264110 1272972 ZNF274 GTRD no Blood (GM12878) 1275026 2054 108352735
chr19 1264110 1272972 ZNF274 GTRD no Blood (GM12878) 1275026 2054 108352736
chr19 1264231 1270619 ZNF274 GTRD no Cervix (HeLa-S3) 1275026 4407 108352737
chr19 1264231 1270619 ZNF274 GTRD no Cervix (HeLa-S3) 1275026 4407 108352738
chr19 1264236 1272666 ZNF274 GTRD no Blood (GM12878) 1275026 2360 108352739
chr19 1264236 1272666 ZNF274 GTRD no Blood (GM12878) 1275026 2360 108352740
chr19 1264280 1272431 TCF7L2 GTRD no Colon (HCT116) 1275026 2595 108352745
chr19 1264280 1272431 TCF7L2 GTRD no Colon (HCT116) 1275026 2595 108352746
chr19 1264388 1270467 ZNF274 GTRD no Bone Marrow (K562) 1275026 4559 108352752
chr19 1264388 1270467 ZNF274 GTRD no Bone Marrow (K562) 1275026 4559 108352753
chr19 1264464 1271597 ZBTB33 GTRD no Lung (A549) 1275026 3429 108352758
chr19 1264464 1271597 ZBTB33 GTRD no Lung (A549) 1275026 3429 108352759
chr19 1264850 1272650 ZNF274 GTRD no Bone Marrow (K562) 1275026 2376 108352781
chr19 1264850 1272650 ZNF274 GTRD no Bone Marrow (K562) 1275026 2376 108352782
chr19 1264907 1270649 TCF7L2 GTRD no Colon (HCT116) 1275026 4377 108352796
chr19 1264907 1270649 TCF7L2 GTRD no Colon (HCT116) 1275026 4377 108352797
chr19 1264982 1277577 ZNF274 GTRD no Bone Marrow (K562) 1275026 2551 108352824
chr19 1264982 1277577 ZNF274 GTRD no Bone Marrow (K562) 1275026 2551 108352825
chr19 1264985 1270515 ZNF143 GTRD no Epithelial (MCF-7) 1275026 4511 108352828
chr19 1264985 1270515 ZNF143 GTRD no Epithelial (MCF-7) 1275026 4511 108352829
chr19 1265021 1271096 ZBTB33 GTRD no Lung (A549) 1275026 3930 108352840
chr19 1265021 1271096 ZBTB33 GTRD no Lung (A549) 1275026 3930 108352841
chr19 1265452 1270485 ZNF143 GTRD no Epithelial (MCF-7) 1275026 4541 108352913
chr19 1265452 1270485 ZNF143 GTRD no Epithelial (MCF-7) 1275026 4541 108352914
chr19 1265747 1277291 ZNF274 GTRD no Bone Marrow (K562) 1275026 2265 108352966
chr19 1265747 1277291 ZNF274 GTRD no Bone Marrow (K562) 1275026 2265 108352967
chr19 1268720 1270503 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4523 21831964
chr19 1268783 1270747 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4279 21831966
chr19 1268835 1270272 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4754 21831967
chr19 1268844 1270607 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4419 21831968
chr19 1268852 1270472 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4554 21831969
chr19 1268859 1270611 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4415 21831970
chr19 1268970 1270830 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4196 21831972
chr19 1269085 1270511 ZBTB33 GTRD no Brain (SK-N-SH) 1275026 4515 21831973
chr19 1277808 1289200 TCF7L2 GTRD no Colon (HCT116) 1275026 2782 108353241
chr19 1277808 1289200 TCF7L2 GTRD no Colon (HCT116) 1275026 2782 108353242
chr19 1278220 1281487 TCF7L2 GTRD no Colon (HCT116) 1275026 3194 108353243
chr19 1278908 1284567 ZNF274 GTRD no Bone Marrow (K562) 1275026 3882 108353244
chr19 1278908 1284567 ZNF274 GTRD no Bone Marrow (K562) 1275026 3882 108353245
chr19 1279115 1281130 ZNF274 GTRD no Blood (GM12878) 1275026 4089 108353246
chr19 1279122 1281032 ZNF274 GTRD no Bone Marrow (K562) 1275026 4096 108353247
chr19 1279169 1284518 ZNF274 GTRD no Bone Marrow (K562) 1275026 4143 108353248
chr19 1279169 1284518 ZNF274 GTRD no Bone Marrow (K562) 1275026 4143 108353249
chr19 1279192 1281363 ZNF274 GTRD no Blood (GM12878) 1275026 4166 108353250
chr19 1279327 1284661 TCF7L2 GTRD no Colon (HCT116) 1275026 4301 108353251
chr19 1279327 1284661 TCF7L2 GTRD no Colon (HCT116) 1275026 4301 108353252
chr19 1279408 1284648 TCF7L2 GTRD no Colon (HCT116) 1275026 4382 108353253
chr19 1279408 1284648 TCF7L2 GTRD no Colon (HCT116) 1275026 4382 108353254
chr19 1279431 1281245 TCF7L2 GTRD no Colon (HCT116) 1275026 4405 108353255
chr19 1279466 1281391 ZNF274 GTRD no Blood (GM12878) 1275026 4440 108353256
chr19 1279489 1281167 ZNF274 GTRD no Blood (GM12878) 1275026 4463 108353257
SNPs associated with C19orf24[ENSG00000228300.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 1271274 rs12609287 C T 3752 Esophagus 4.79016e-13 5374101
chr19 1275987 rs12979308 C G 0 Esophagus 3.43098e-33 5374181
chr19 1277275 rs757292 G C 0 Esophagus 1.63016e-05 5374198
chr19 1268994 rs12980707 A G 6032 Heart 0.000143532 5374058
chr19 1274539 rs8108009 T C 487 Heart 0.00259586 5374144
chr19 1275987 rs12979308 C G 0 Pancreas 5.32047e-22 5374181
chr19 1271274 rs12609287 C T 3752 Breast 1.71187e-08 5374101
chr19 1275088 rs7257836 T G 0 Spleen 0.00340424 5374155
chr19 1268178 rs12975875 G A 6848 Ovary 0.0197865 5374046
chr19 1270231 rs398033678 GC G 4795 Uterus 0.0522071 5374085
chr19 1278611 rs5826729 ACAGGGCC A 0 Thyroid 1.42965e-07 5374221
chr19 1283615 rs2379240 G C 4367 Lung 8.7878e-07 5374305
chr19 1274539 rs8108009 T C 487 Adrenal 2.42684e-05 5374144
Details of C19orf24[ENSG00000228300.9]
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Genomic Location chr19:1275026-1279248[+]
TSS 1275026
Gene Name C19orf24
Ensembl ID ENSG00000228300.9
ENTREZID 55009
Uniprot
Q9BVV8
Protein Name
isoform CRA_a
Chromosome 19 open reading frame 24
Uncharacterized membrane protein C19orf24
Expression levels of C19orf24[ENSG00000228300.9]
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