EnhancerDB
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Enhancers that regulate ATP2C1[ENSG00000017260.15]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 130475565 130482815 enh7540 130569439 86624
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (Karpas-422) Lung (PC-9)
chr3 130487625 130493935 enh54345 130569439 75504
Cervix (HeLa-S3) Large Intestine
chr3 130506645 130511195 enh54346 130569439 58244
Large Intestine Stomach
chr3 130511550 130516415 enh70842 130569439 53024
Neural Stem Cells (H9) Brain (SK-N-MC)
chr3 130537762 130550495 enh20932 130569439 18944
Prostate (PC-3) Large Intestine Placenta Adrenal Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
chr3 130539887 130540309 vista42435 130569439 29130
VISTA
chr3 130551465 130562522 enh45504 130569439 6917
Peripheral Blood (MM.1S) Adrenal Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr3 130558055 130558328 vista42436 130569439 11111
VISTA
chr3 130560260 130560548 vista42437 130569439 8891
VISTA
chr3 130562630 130562648 vista42438 130569439 6791
VISTA
chr3 130576586 130576789 vista42439 130569439 7147
VISTA
chr3 130617785 130621935 enh97347 130569439 48346
Epithelial (MCF-7)
chr3 130622465 130629115 enh35869 130569439 53026
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Blood (OCI-LY7) Muscle (A673) Peripheral Blood (MM.1S) Blood (T-cell) Stomach
chr3 130632585 130639238 enh7541 130569439 63146
Prostate (PC-3) Brain (SK-N-MC) Blood (Karpas-422) Muscle (Myotube) Heart
chr3 130637982 130638444 vista42440 130569439 68543
VISTA
chr3 130642525 130648735 enh7542 130569439 73086
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Astrocyte Blood (GM12878) Muscle (A673) Blood (Karpas-422)
chr3 130664945 130671715 enh35870 130569439 95506
Astrocyte Prostate (PC-3)
Transcript facotrs that regulate ATP2C1[ENSG00000017260.15]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with ATP2C1[ENSG00000017260.15], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 130548024 rs77265432 A C 21415 Esophagus 0.187264 7031779
chr3 130826604 rs114323548 G A 91048 Heart 0.406915 7032766
chr3 131536810 rs9851479 A G 801254 Heart 0.384117 7035109
chr3 131071714 rs80139861 T C 336158 Thyroid 0.00114796 7033463
Details of ATP2C1[ENSG00000017260.15]
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Genomic Location chr3:130569439-130735556[+]
TSS 130569439
Gene Name ATP2C1
Ensembl ID ENSG00000017260.15
ENTREZID 27032
Uniprot
B4E295
B4E2Q0
P98194
Protein Name
Calcium-transporting ATPase
Calcium-transporting ATPase type 2C member 1
Expression levels of ATP2C1[ENSG00000017260.15]
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