EnhancerDB
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Enhancers that regulate ABI3[ENSG00000108798.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 47176198 47191535 enh17201 47287589 96054
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 47193211 47197593 enh58761 47287589 89996
Esophagus Skin (Keratinocyte) Prostate (RWPE1)
chr17 47199085 47203235 enh109771 47287589 84354
Stomach
chr17 47213605 47217755 enh112505 47287589 69834
Brain (SK-N-MC)
chr17 47221284 47227835 enh32224 47287589 59754
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast)
chr17 47255785 47265215 enh4457 47287589 22374
Peripheral Blood (MM.1S) Blood (Karpas-422)
chr17 47266125 47276833 enh4458 47287589 10756
Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Pancreas (Panc1) Uterus
chr17 47270202 47270509 vista25058 47287589 17080
VISTA
chr17 47278932 47279253 vista25059 47287589 8336
VISTA
chr17 47290816 47291067 vista25060 47287589 3227
VISTA
chr17 47295492 47295787 vista25061 47287589 7903
VISTA
chr17 47311645 47321315 enh17202 47287589 24056
Bone Marrow (K562) Placenta
chr17 47312786 47313015 vista25062 47287589 25197
VISTA
chr17 47323425 47332255 enh17203 47287589 35836
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Heart
chr17 47335205 47340255 enh48039 47287589 47616
Pancreas (Panc1) Uterus Thymus
chr17 47337469 47337918 vista25063 47287589 49880
VISTA
chr17 47341708 47345868 enh89867 47287589 54119
Prostate (RWPE1)
Transcript facotrs that regulate ABI3[ENSG00000108798.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 47290428 47292151 ZNF274 GTRD no Bone Marrow (K562) 47287589 2839 108269185
chr17 47290452 47292382 ZNF274 GTRD no Bone Marrow (K562) 47287589 2863 108269186
chr17 47290528 47290922 ZNF274 GTRD no Bone Marrow (K562) 47287589 2939 108269187
chr17 47290642 47292408 ZNF274 GTRD no Bone Marrow (K562) 47287589 3053 108269188
chr17 47290698 47292665 ZNF274 GTRD no Bone Marrow (K562) 47287589 3109 108269189
chr17 47290699 47292804 ZNF274 GTRD no Bone Marrow (K562) 47287589 3110 108269190
chr17 47290729 47291188 ZNF274 GTRD no Bone Marrow (K562) 47287589 3140 108269191
chr17 47290730 47292221 ZNF274 GTRD no Bone Marrow (K562) 47287589 3141 108269192
chr17 47290762 47292234 ZNF274 GTRD no Bone Marrow (K562) 47287589 3173 108269193
chr17 47290796 47291106 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3207 108269194
chr17 47290797 47291955 ZNF274 GTRD no Liver (HepG2) 47287589 3208 108269195
chr17 47290803 47291929 ZNF274 GTRD no Liver (HepG2) 47287589 3214 108269196
chr17 47290806 47292114 ZNF274 GTRD no Bone Marrow (K562) 47287589 3217 108269197
chr17 47290811 47292040 ZNF274 GTRD no Bone Marrow (K562) 47287589 3222 108269198
chr17 47290813 47291077 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3224 108269199
chr17 47290816 47292410 ZNF274 GTRD no Liver (HepG2) 47287589 3227 108269200
chr17 47290817 47291717 TEF1 GTRD no Bone (Osteoblast) 47287589 3228 108269201
chr17 47290819 47290834 NR2C2 JASPAR yes 47287589 3230 21251704
chr17 47290829 47290838 ZEB1 JASPAR yes 47287589 3240 21251705
chr17 47290830 47290840 TCF3 JASPAR yes 47287589 3241 21251706
chr17 47290830 47290840 TCF4 JASPAR yes 47287589 3241 21251707
chr17 47290830 47292024 ZNF274 GTRD no Liver (HepG2) 47287589 3241 108269202
chr17 47290831 47290840 SNAI2 JASPAR yes 47287589 3242 21251708
chr17 47290832 47290837 USF2 TRANSFAC yes 47287589 3243 21251709
chr17 47290836 47291318 ZNF274 GTRD no Bone Marrow (K562) 47287589 3247 108269203
chr17 47290841 47290862 ZNF263 JASPAR yes 47287589 3252 21251710
chr17 47290849 47290855 MZF1 JASPAR yes 47287589 3260 21251711
chr17 47290850 47290870 RREB1 JASPAR yes 47287589 3261 21251712
chr17 47290858 47290871 ZBTB18 JASPAR yes 47287589 3269 21251713
chr17 47290862 47291122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3273 108269204
chr17 47290864 47291168 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3275 108269205
chr17 47290865 47290876 STAT1 JASPAR yes 47287589 3276 21251714
chr17 47290865 47290876 STAT3 JASPAR yes 47287589 3276 21251715
chr17 47290880 47290885 TFAP2A TRANSFAC yes 47287589 3291 21251716
chr17 47290880 47290886 MZF1 JASPAR yes 47287589 3291 21251717
chr17 47290889 47290909 ESR1 JASPAR yes 47287589 3300 21251718
chr17 47290890 47290895 ETS2 TRANSFAC yes 47287589 3301 21251719
chr17 47290890 47291051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3301 108269206
chr17 47290895 47291159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3306 108269207
chr17 47290895 47292289 ZNF274 GTRD no Liver (HepG2) 47287589 3306 108269208
chr17 47290897 47290915 ESR1 JASPAR yes 47287589 3308 21251720
chr17 47290898 47290913 ESR2 JASPAR yes 47287589 3309 21251721
chr17 47290898 47290918 ESR1 JASPAR yes 47287589 3309 21251722
chr17 47290901 47290912 ESRRA JASPAR yes 47287589 3312 21251723
chr17 47290901 47290914 NR2F1 JASPAR yes 47287589 3312 21251724
chr17 47290902 47292215 ZNF274 GTRD no Bone Marrow (K562) 47287589 3313 108269209
chr17 47290905 47290909 ESR1 TRANSFAC yes 47287589 3316 21251725
chr17 47290906 47290913 USF2 TRANSFAC yes 47287589 3317 21251726
chr17 47290908 47290913 USF2 TRANSFAC yes 47287589 3319 21251727
chr17 47290911 47291083 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3322 108269210
chr17 47290925 47290944 PAX5 JASPAR yes 47287589 3336 21251728
chr17 47290926 47292044 ZNF274 GTRD no Liver (HepG2) 47287589 3337 108269211
chr17 47290946 47292489 ZNF274 GTRD no Liver (HepG2) 47287589 3357 108269212
chr17 47290953 47290966 POU2F2 JASPAR yes 47287589 3364 21251729
chr17 47290953 47290967 POU1F1 JASPAR yes 47287589 3364 21251730
chr17 47290954 47290966 POU3F1 JASPAR yes 47287589 3365 21251731
chr17 47290954 47290966 POU3F2 JASPAR yes 47287589 3365 21251732
chr17 47290954 47290967 POU3F3 JASPAR yes 47287589 3365 21251733
chr17 47290954 47291965 ZNF274 GTRD no Liver (HepG2) 47287589 3365 108269213
chr17 47290955 47290967 POU2F1 JASPAR yes 47287589 3366 21251734
chr17 47290956 47290963 POU2F1 TRANSFAC yes 47287589 3367 21251735
chr17 47290956 47290963 POU2F2C TRANSFAC yes 47287589 3367 21251736
chr17 47290956 47290963 POU2F2 TRANSFAC yes 47287589 3367 21251737
chr17 47290956 47290965 POU3F4 JASPAR yes 47287589 3367 21251738
chr17 47290956 47290965 POU5F1B JASPAR yes 47287589 3367 21251739
chr17 47290956 47291826 ZNF274 GTRD no Bone Marrow (K562) 47287589 3367 108269214
chr17 47290957 47290969 PBX1 JASPAR yes 47287589 3368 21251740
chr17 47290960 47291248 ZNF274 GTRD no Bone Marrow (K562) 47287589 3371 108269215
chr17 47290964 47292078 ZNF274 GTRD no Liver (HepG2) 47287589 3375 108269216
chr17 47290975 47292008 ZNF274 GTRD no Liver (HepG2) 47287589 3386 108269217
chr17 47290977 47290996 REST JASPAR yes 47287589 3388 21251741
chr17 47290984 47291866 ZNF274 GTRD no Liver (HepG2) 47287589 3395 108269218
chr17 47290987 47291936 ZNF274 GTRD no Liver (HepG2) 47287589 3398 108269219
chr17 47290990 47291008 ESR1 JASPAR yes 47287589 3401 21251742
chr17 47290997 47292079 ZNF274 GTRD no Liver (HepG2) 47287589 3408 108269220
chr17 47290998 47291010 PKNOX1 JASPAR yes 47287589 3409 21251743
chr17 47290998 47291010 PKNOX2 JASPAR yes 47287589 3409 21251744
chr17 47290998 47291010 TGIF1 JASPAR yes 47287589 3409 21251745
chr17 47290998 47291010 TGIF2 JASPAR yes 47287589 3409 21251746
chr17 47290999 47291009 HEY2 JASPAR yes 47287589 3410 21251747
chr17 47290999 47291009 ID4 JASPAR yes 47287589 3410 21251748
chr17 47290999 47291009 MSC JASPAR yes 47287589 3410 21251749
chr17 47290999 47291009 MYF6 JASPAR yes 47287589 3410 21251750
chr17 47291000 47291009 SNAI2 JASPAR yes 47287589 3411 21251751
chr17 47291001 47291006 USF2 TRANSFAC yes 47287589 3412 21251752
chr17 47291004 47291008 NFE TRANSFAC yes 47287589 3415 21251753
chr17 47291005 47291583 ZNF274 GTRD no Cervix (HeLa-S3) 47287589 3416 108269221
chr17 47291008 47291635 ZBTB33 GTRD no Lung (A549) 47287589 3419 108269222
chr17 47291010 47291022 HINFP JASPAR yes 47287589 3421 21251754
chr17 47291012 47291022 HINFP JASPAR yes 47287589 3423 21251755
chr17 47291012 47291977 ZNF274 GTRD no Liver (HepG2) 47287589 3423 108269223
chr17 47291019 47291022 MYB TRANSFAC yes 47287589 3430 21251756
chr17 47291024 47291887 ZNF274 GTRD no Liver (HepG2) 47287589 3435 108269224
chr17 47291025 47291405 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 47287589 3436 108269225
chr17 47291029 47292023 ZNF274 GTRD no Liver (HepG2) 47287589 3440 108269226
chr17 47291035 47291051 GLIS1 JASPAR yes 47287589 3446 21251757
chr17 47291039 47291051 INSM1 JASPAR yes 47287589 3450 21251758
chr17 47291039 47291977 ZNF274 GTRD no Liver (HepG2) 47287589 3450 108269227
SNPs associated with ABI3[ENSG00000108798.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 46663670 rs139496248 A G 623919 Esophagus 0.107207 4910843
chr17 47629921 rs140254115 C T 329334 Esophagus 0.260942 4916679
chr17 48253226 rs73987439 A G,T 952639 Heart 0.29626 4921249
chr17 48038696 rs118120789 G A 738109 Pancreas 0.339678 4919576
chr17 47855767 rs7209058 G C 555180 Breast 0.446467 4917940
chr17 48123321 rs9895404 C T 822734 Spleen 0.303394 4920487
chr17 48114204 rs74788205 C T 813617 Ovary 0.21096 4920377
chr17 47986680 rs59932354 A ATTAG 686093 Uterus 0.356866 4918916
chr17 47855275 rs77378264 A T 554688 Thyroid 0.236462 4917930
chr17 48019891 rs6504626 T C 719304 Stomach 0.425393 4919317
chr17 48169349 rs10570107 CAT C 868762 Adrenal 0.123339 4920756
Details of ABI3[ENSG00000108798.4]
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Genomic Location chr17:47287589-47300587[+]
TSS 47287589
Gene Name ABI3
Ensembl ID ENSG00000108798.4
ENTREZID 51225
Uniprot
Q9P2A4
Protein Name
ABI gene family member 3
Alternative protein ABI3
Expression levels of ABI3[ENSG00000108798.4]
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