EnhancerDB
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Enhancers that regulate HOXB3[ENSG00000120093.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 46553725 46585590 enh4456 46682274 96684
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
chr17 46583139 46583523 vista25028 46682274 98751
VISTA
chr17 46586283 46601895 enh17197 46682274 80379
Bone Marrow (K562) Prostate (PC-3) Large Intestine Esophagus Bone (Osteoblast) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr17 46605931 46606242 vista25029 46682274 76032
VISTA
chr17 46642274 46642589 vista25030 46682274 39685
VISTA
chr17 46643791 46644035 vista25031 46682274 38239
VISTA
chr17 46644443 46644754 vista25032 46682274 37520
VISTA
chr17 46647653 46647800 vista25033 46682274 34474
VISTA
chr17 46648538 46649382 vista25034 46682274 32892
VISTA
chr17 46654606 46654947 vista25035 46682274 27327
VISTA
chr17 46660825 46667135 enh99425 46682274 15139
Uterus
chr17 46662223 46662405 vista25036 46682274 19869
VISTA
chr17 46662684 46663231 vista25037 46682274 19043
VISTA
chr17 46664992 46665342 vista25038 46682274 16932
VISTA
chr17 46680378 46680812 vista25039 46682274 1462
VISTA
chr17 46682250 46682768 vista700 46682274 24
VISTA
chr17 46696942 46697254 vista25040 46682274 14668
VISTA
chr17 46702579 46702749 vista25041 46682274 20305
VISTA
chr17 46708678 46709096 vista25042 46682274 26404
VISTA
chr17 46745530 46751295 enh57708 46682274 63256
Pancreas Pancreas (Panc1) Lung (A549)
chr17 46752305 46761275 enh57709 46682274 70031
Prostate (PC-3) Brain (SK-N-MC) Ovary Lung (A549) Muscle (A673)
chr17 46767725 46768126 vista25043 46682274 85451
VISTA
Transcript facotrs that regulate HOXB3[ENSG00000120093.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 46678870 46680581 EZH2 UCSC Txn Factor no Conserved 46682274 1693 108268444
chr17 46678923 46680581 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46682274 1693 108268445
chr17 46680276 46680740 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 46682274 1534 108268446
chr17 46680411 46680425 ONECUT3 JASPAR yes 46682274 1849 21250940
chr17 46680412 46680423 HOXA10 JASPAR yes 46682274 1851 21250941
chr17 46680423 46680428 GATA2 JASPAR yes 46682274 1846 21250942
chr17 46680425 46680431 MZF1 JASPAR yes 46682274 1843 21250943
chr17 46680439 46680444 SP1 TRANSFAC yes 46682274 1830 21250944
chr17 46680453 46680923 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 46682274 1351 108268447
chr17 46680454 46680457 MYB TRANSFAC yes 46682274 1817 21250945
chr17 46680462 46680466 LFA1 TRANSFAC yes 46682274 1808 21250946
chr17 46680472 46680487 TFAP2A JASPAR yes 46682274 1787 21250947
chr17 46680472 46680487 TFAP2C JASPAR yes 46682274 1787 21250948
chr17 46680473 46680484 TFAP2A JASPAR yes 46682274 1790 21250949
chr17 46680473 46680484 TFAP2B JASPAR yes 46682274 1790 21250950
chr17 46680473 46680484 TFAP2C JASPAR yes 46682274 1790 21250951
chr17 46680474 46680483 TFAP2A JASPAR yes 46682274 1791 21250952
chr17 46680502 46680523 IRF1 JASPAR yes 46682274 1751 21250953
chr17 46680505 46680519 IRF7 JASPAR yes 46682274 1755 21250954
chr17 46680506 46680521 PRDM1 JASPAR yes 46682274 1753 21250955
chr17 46680514 46680525 DUX4 JASPAR yes 46682274 1749 21250956
chr17 46680520 46680530 MAX JASPAR yes 46682274 1744 21250957
chr17 46680520 46680531 USF2 JASPAR yes 46682274 1743 21250958
chr17 46680520 46680540 TBX19 JASPAR yes 46682274 1734 21250959
chr17 46680522 46680538 T JASPAR yes 46682274 1736 21250960
chr17 46680523 46680541 TP53 JASPAR yes 46682274 1733 21250961
chr17 46680525 46680540 TP53 JASPAR yes 46682274 1734 21250962
chr17 46680543 46680555 MEF2B JASPAR yes 46682274 1719 21250963
chr17 46680594 46680609 HSF1 JASPAR yes 46682274 1665 21250964
chr17 46680595 46680608 HSF4 JASPAR yes 46682274 1666 21250965
chr17 46680606 46680612 MZF1 JASPAR yes 46682274 1662 21250966
chr17 46680607 46680621 PLAG1 JASPAR yes 46682274 1653 21250967
chr17 46680627 46680631 YY1 TRANSFAC yes 46682274 1643 21250968
chr17 46680638 46680653 TFAP2A JASPAR yes 46682274 1621 21250969
chr17 46680641 46680653 TFAP2A JASPAR yes 46682274 1621 21250970
chr17 46680641 46680653 TFAP2B JASPAR yes 46682274 1621 21250971
chr17 46680641 46680653 TFAP2C JASPAR yes 46682274 1621 21250972
chr17 46680647 46680660 SMAD2 JASPAR yes 46682274 1614 21250973
chr17 46680687 46680700 SMAD2 JASPAR yes 46682274 1574 21250974
chr17 46680691 46680695 NFE TRANSFAC yes 46682274 1579 21250975
chr17 46680692 46680703 USF2 JASPAR yes 46682274 1571 21250976
chr17 46680692 46680704 PKNOX2 JASPAR yes 46682274 1570 21250977
chr17 46680693 46680700 USF2 TRANSFAC yes 46682274 1574 21250978
chr17 46680695 46680700 USF2 TRANSFAC yes 46682274 1574 21250979
chr17 46680702 46680706 H1TF2 TRANSFAC yes 46682274 1568 21250980
chr17 46680702 46680706 NFE TRANSFAC yes 46682274 1568 21250981
chr17 46680702 46680706 SRF TRANSFAC yes 46682274 1568 21250982
chr17 46680708 46680729 ZNF263 JASPAR yes 46682274 1545 21250983
chr17 46680712 46680717 SP1 TRANSFAC yes 46682274 1557 21250984
chr17 46680715 46680725 ZNF740 JASPAR yes 46682274 1549 21250985
chr17 46680718 46680724 MZF1 JASPAR yes 46682274 1550 21250986
chr17 46680719 46680729 SP1 JASPAR yes 46682274 1545 21250987
chr17 46680722 46680734 INSM1 JASPAR yes 46682274 1540 21250988
chr17 46680722 46680736 GLIS3 JASPAR yes 46682274 1538 21250989
chr17 46680746 46680751 GATA2 JASPAR yes 46682274 1523 21250990
chr17 46680775 46680779 NFE TRANSFAC yes 46682274 1495 21250991
chr17 46680780 46680787 JUN TRANSFAC yes 46682274 1487 21250992
chr17 46682029 46683162 POLR2A UCSC Txn Factor no Conserved 46682274 245 107688229
chr17 46682253 46682257 NFE TRANSFAC yes 46682274 17 14770
chr17 46682269 46682539 USF1 UCSC Txn Factor no Conserved 46682274 5 107688230
chr17 46682271 46682286 MEF2C JASPAR yes 46682274 3 14771
chr17 46682272 46682287 MEF2A JASPAR yes 46682274 2 14772
chr17 46682273 46682543 USF2 UCSC Txn Factor no Conserved 46682274 1 107688231
chr17 46682295 46682310 TFAP2A JASPAR yes 46682274 21 14773
chr17 46682295 46682310 TFAP2C JASPAR yes 46682274 21 14774
chr17 46682323 46682334 TBX20 JASPAR yes 46682274 49 14775
chr17 46682324 46682332 TBX5 JASPAR yes 46682274 50 14776
chr17 46682349 46682353 YY1 TRANSFAC yes 46682274 75 14777
chr17 46682352 46682356 TEAD2 TRANSFAC yes 46682274 78 14778
chr17 46682354 46682357 MYB TRANSFAC yes 46682274 80 14779
chr17 46682367 46682381 GATA2 JASPAR yes 46682274 93 14780
chr17 46682368 46682386 RARA JASPAR yes 46682274 94 14781
chr17 46682392 46682407 RFX5 JASPAR yes 46682274 118 14782
chr17 46682398 46682409 USF1 JASPAR yes 46682274 124 14783
chr17 46682398 46682409 USF2 JASPAR yes 46682274 124 14784
chr17 46682399 46682409 TFE3 JASPAR yes 46682274 125 14785
chr17 46682399 46682409 TFEB JASPAR yes 46682274 125 14786
chr17 46682399 46682409 TFEC JASPAR yes 46682274 125 14787
chr17 46682399 46682410 USF1 JASPAR yes 46682274 125 14788
chr17 46682411 46682426 NFYB JASPAR yes 46682274 137 14789
chr17 46682413 46682429 NFYA JASPAR yes 46682274 139 14790
chr17 46682418 46682422 H1TF2 TRANSFAC yes 46682274 144 14791
chr17 46682418 46682422 NFE TRANSFAC yes 46682274 144 14792
chr17 46682418 46682422 SRF TRANSFAC yes 46682274 144 14793
chr17 46682437 46682448 HOXC13 JASPAR yes 46682274 163 14794
chr17 46682448 46682468 TBX19 JASPAR yes 46682274 174 14795
chr17 46682449 46682453 NFE TRANSFAC yes 46682274 175 14796
chr17 46682450 46682466 T JASPAR yes 46682274 176 14797
chr17 46682454 46682460 SOX10 JASPAR yes 46682274 180 14798
chr17 46682463 46682476 POU2F2 JASPAR yes 46682274 189 14799
chr17 46682463 46682477 POU1F1 JASPAR yes 46682274 189 14800
chr17 46682464 46682476 POU3F1 JASPAR yes 46682274 190 14801
chr17 46682464 46682476 POU3F2 JASPAR yes 46682274 190 14802
chr17 46682464 46682477 POU3F3 JASPAR yes 46682274 190 14803
chr17 46682465 46682477 POU2F1 JASPAR yes 46682274 191 14804
chr17 46682469 46682476 TBP TRANSFAC yes 46682274 195 14805
chr17 46682469 46682476 TFIID TRANSFAC yes 46682274 195 14806
chr17 46682482 46682487 ETS2 TRANSFAC yes 46682274 208 14807
chr17 46682482 46682492 TEAD4 JASPAR yes 46682274 208 14808
chr17 46682486 46682497 HOXA10 JASPAR yes 46682274 212 14809
chr17 46682487 46682496 CDX1 JASPAR yes 46682274 213 14810
chr17 46682487 46682498 CDX2 JASPAR yes 46682274 213 14811
chr17 46682495 46682499 YY1 TRANSFAC yes 46682274 221 14812
chr17 46682534 46682546 YY1 JASPAR yes 46682274 260 14813
chr17 46682537 46682543 YY1 JASPAR yes 46682274 263 14814
chr17 46682539 46682560 ZNF263 JASPAR yes 46682274 265 14815
chr17 46682542 46682563 ZNF263 JASPAR yes 46682274 268 14816
chr17 46682543 46682564 ZNF263 JASPAR yes 46682274 269 14817
chr17 46682545 46682566 ZNF263 JASPAR yes 46682274 271 14818
chr17 46682554 46682569 PRDM1 JASPAR yes 46682274 280 14819
chr17 46682568 46682573 TFAP2A TRANSFAC yes 46682274 294 14820
chr17 46682568 46682574 MZF1 JASPAR yes 46682274 294 14821
chr17 46682568 46682581 NFKB1 JASPAR yes 46682274 294 14822
chr17 46682568 46682581 NFKB2 JASPAR yes 46682274 294 14823
chr17 46682569 46682580 NFKB1 JASPAR yes 46682274 295 14824
chr17 46682570 46682580 NFKB1 JASPAR yes 46682274 296 14825
chr17 46682570 46682580 RELA JASPAR yes 46682274 296 14826
chr17 46682570 46682581 NFKB1 JASPAR yes 46682274 296 14827
chr17 46682571 46682581 RELA JASPAR yes 46682274 297 14828
chr17 46682571 46682581 REL JASPAR yes 46682274 297 14829
chr17 46682578 46682582 H1TF2 TRANSFAC yes 46682274 304 14830
chr17 46682578 46682582 NFE TRANSFAC yes 46682274 304 14831
chr17 46682578 46682582 SRF TRANSFAC yes 46682274 304 14832
chr17 46682586 46682606 RREB1 JASPAR yes 46682274 312 14833
chr17 46682599 46682609 ZNF740 JASPAR yes 46682274 325 14834
chr17 46682600 46682610 ZNF740 JASPAR yes 46682274 326 14835
chr17 46682606 46682610 LFA1 TRANSFAC yes 46682274 332 14836
chr17 46682608 46682619 FLI1 JASPAR yes 46682274 334 14837
chr17 46682609 46682617 FEV JASPAR yes 46682274 335 14838
chr17 46682611 46682626 HNF4G JASPAR yes 46682274 337 14839
chr17 46682612 46682627 HNF4A JASPAR yes 46682274 338 14840
chr17 46682618 46682633 HNF4G JASPAR yes 46682274 344 14841
chr17 46682633 46682636 MYB TRANSFAC yes 46682274 359 14842
chr17 46682646 46682651 ETS2 TRANSFAC yes 46682274 372 14843
chr17 46682660 46682666 ETS1 JASPAR yes 46682274 386 14844
chr17 46682670 46682676 MZF1 JASPAR yes 46682274 396 14845
chr17 46682698 46682713 STAT1 JASPAR yes 46682274 424 14846
chr17 46682700 46682711 STAT1 JASPAR yes 46682274 426 14847
SNPs associated with HOXB3[ENSG00000120093.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 46629006 rs3826542 G A 0 Esophagus 0.000595326 4910622
chr17 46801998 rs56290537 G C 119724 Heart 0.328672 4911818
chr17 46601838 rs143331013 G A 24394 Pancreas 0.00500339 4910548
chr17 46629006 rs3826542 G A 0 Breast 0.220261 4910622
chr17 47196815 rs186481508 C T 514541 Stomach 0.0894618 4913870
chr17 47185444 rs117726862 A G 503170 Adrenal 0.396776 4913716
Details of HOXB3[ENSG00000120093.7]
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Genomic Location chr17:46626232-46682274[-]
TSS 46682274
Gene Name HOXB3
Ensembl ID ENSG00000120093.7
ENTREZID 3213
Uniprot
B3KNJ7
P14651
Protein Name
Homeobox protein Hox-B3
Expression levels of HOXB3[ENSG00000120093.7]
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