EnhancerDB

Enhancers that regulate YIPF2[ENSG00000130733.6]

Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears
chr19	10949257	10949551	vista28605	11039357	89806	VISTA
chr19	10955666	10955680	vista28606	11039357	83677	VISTA
chr19	10983266	10983642	vista28607	11039357	55715	VISTA
chr19	10983285	11012541	enh5003	11039357	26816	Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19	10983653	10983862	vista28608	11039357	55495	VISTA
chr19	10987245	10987998	vista28609	11039357	51359	VISTA
chr19	10988040	10988081	vista28610	11039357	51276	VISTA
chr19	10989126	10989500	vista28611	11039357	49857	VISTA
chr19	10992105	10992492	vista28612	11039357	46865	VISTA
chr19	10999263	10999360	vista28613	11039357	39997	VISTA
chr19	11044165	11061272	enh17918	11039357	4808	Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr19	11044199	11044446	vista28614	11039357	4842	VISTA
chr19	11061468	11065830	enh17919	11039357	22111	Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
chr19	11069405	11074895	enh5004	11039357	30048	Blood (Karpas-422)
chr19	11077205	11090515	enh5005	11039357	37848	Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Thymus Stomach
chr19	11126493	11132054	enh102599	11039357	87136	Bone (Osteoblast)

Transcript facotrs that regulate YIPF2[ENSG00000130733.6]

Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id
chr19	11044067	11044357	ZNF143	GTRD	no	Epithelial (MCF-7)	11039357	4710	21849164
chr19	11044067	11044357	ZNF143	GTRD	no	Epithelial (MCF-7)	11039357	4710	108384247
chr19	11044208	11044212	NFE	TRANSFAC	yes		11039357	4851	70803594
chr19	11044208	11044212	NFE	TRANSFAC	yes		11039357	4851	112445775
chr19	11044208	11044213	GATA1	TRANSFAC	yes		11039357	4851	70803595
chr19	11044208	11044213	GATA1	TRANSFAC	yes		11039357	4851	112445776
chr19	11044208	11044214	GATA3	JASPAR	yes		11039357	4851	70803596
chr19	11044208	11044214	GATA3	JASPAR	yes		11039357	4851	112445777
chr19	11044212	11044218	LEF1	TRANSFAC	yes		11039357	4855	70803597
chr19	11044212	11044218	SOX10	JASPAR	yes		11039357	4855	70803598
chr19	11044212	11044218	LEF1	TRANSFAC	yes		11039357	4855	112445778
chr19	11044212	11044218	SOX10	JASPAR	yes		11039357	4855	112445779
chr19	11044255	11044265	NFIA	JASPAR	yes		11039357	4898	70803599
chr19	11044255	11044265	NFIA	JASPAR	yes		11039357	4898	112445780
chr19	11044257	11044263	NFIC	JASPAR	yes		11039357	4900	70803600
chr19	11044257	11044263	NFIC	JASPAR	yes		11039357	4900	112445781
chr19	11044257	11044272	HNF4A	JASPAR	yes		11039357	4900	70803601
chr19	11044257	11044272	HNF4A	JASPAR	yes		11039357	4900	112445782
chr19	11044258	11044272	RXRB	JASPAR	yes		11039357	4901	70803602
chr19	11044258	11044272	RXRG	JASPAR	yes		11039357	4901	70803603
chr19	11044258	11044272	RXRB	JASPAR	yes		11039357	4901	112445783
chr19	11044258	11044272	RXRG	JASPAR	yes		11039357	4901	112445784
chr19	11044258	11044273	HNF4G	JASPAR	yes		11039357	4901	70803604
chr19	11044258	11044273	HNF4G	JASPAR	yes		11039357	4901	112445785
chr19	11044261	11044265	YY1	TRANSFAC	yes		11039357	4904	70803605
chr19	11044261	11044265	YY1	TRANSFAC	yes		11039357	4904	112445786
chr19	11044261	11044274	NR2F1	JASPAR	yes		11039357	4904	70803606
chr19	11044261	11044274	NR2F1	JASPAR	yes		11039357	4904	112445787
chr19	11044264	11044279	HNF4A	JASPAR	yes		11039357	4907	70803607
chr19	11044264	11044279	HNF4A	JASPAR	yes		11039357	4907	112445788
chr19	11044265	11044279	NR2F1	JASPAR	yes		11039357	4908	70803608
chr19	11044265	11044279	RXRB	JASPAR	yes		11039357	4908	70803609
chr19	11044265	11044279	RXRG	JASPAR	yes		11039357	4908	70803610
chr19	11044265	11044279	NR2F1	JASPAR	yes		11039357	4908	112445789
chr19	11044265	11044279	RXRB	JASPAR	yes		11039357	4908	112445790
chr19	11044265	11044279	RXRG	JASPAR	yes		11039357	4908	112445791
chr19	11044265	11044280	HNF4G	JASPAR	yes		11039357	4908	70803611
chr19	11044265	11044280	HNF4G	JASPAR	yes		11039357	4908	112445792
chr19	11044271	11044287	POU4F2	JASPAR	yes		11039357	4914	70803612
chr19	11044271	11044287	POU4F3	JASPAR	yes		11039357	4914	70803613
chr19	11044271	11044287	POU4F2	JASPAR	yes		11039357	4914	112445793
chr19	11044271	11044287	POU4F3	JASPAR	yes		11039357	4914	112445794
chr19	11044290	11044305	SCRT1	JASPAR	yes		11039357	4933	70803614
chr19	11044290	11044305	SCRT1	JASPAR	yes		11039357	4933	112445795
chr19	11044294	11044303	SNAI2	JASPAR	yes		11039357	4937	70803615
chr19	11044294	11044303	SNAI2	JASPAR	yes		11039357	4937	112445796
chr19	11044294	11044304	FIGLA	JASPAR	yes		11039357	4937	70803616
chr19	11044294	11044304	ID4	JASPAR	yes		11039357	4937	70803617
chr19	11044294	11044304	MSC	JASPAR	yes		11039357	4937	70803618
chr19	11044294	11044304	MYF6	JASPAR	yes		11039357	4937	70803619
chr19	11044294	11044304	TCF3	JASPAR	yes		11039357	4937	70803620
chr19	11044294	11044304	TCF4	JASPAR	yes		11039357	4937	70803621
chr19	11044294	11044304	TFAP4	JASPAR	yes		11039357	4937	70803622
chr19	11044294	11044304	FIGLA	JASPAR	yes		11039357	4937	112445797
chr19	11044294	11044304	ID4	JASPAR	yes		11039357	4937	112445798
chr19	11044294	11044304	MSC	JASPAR	yes		11039357	4937	112445799
chr19	11044294	11044304	MYF6	JASPAR	yes		11039357	4937	112445800
chr19	11044294	11044304	TCF3	JASPAR	yes		11039357	4937	112445801
chr19	11044294	11044304	TCF4	JASPAR	yes		11039357	4937	112445802
chr19	11044294	11044304	TFAP4	JASPAR	yes		11039357	4937	112445803
chr19	11044294	11044306	TAL1	JASPAR	yes		11039357	4937	70803623
chr19	11044294	11044306	TAL1	JASPAR	yes		11039357	4937	112445804
chr19	11044306	11044324	MAFF	JASPAR	yes		11039357	4949	70803624
chr19	11044306	11044324	MAFF	JASPAR	yes		11039357	4949	112445805
chr19	11044307	11044322	MAFK	JASPAR	yes		11039357	4950	70803625
chr19	11044307	11044322	MAFK	JASPAR	yes		11039357	4950	112445806
chr19	11044311	11044322	NRL	JASPAR	yes		11039357	4954	70803626
chr19	11044311	11044322	NRL	JASPAR	yes		11039357	4954	112445807
chr19	11044330	11044337	SPIB	JASPAR	yes		11039357	4973	70803627
chr19	11044330	11044337	SPIB	JASPAR	yes		11039357	4973	112445808
chr19	11044356	11044366	NFAT4	TRANSFAC	yes		11039357	4999	70803628
chr19	11044356	11044366	NFAT4	TRANSFAC	yes		11039357	4999	112445809
chr19	11044357	11044361	YY1	TRANSFAC	yes		11039357	5000	70803629
chr19	11044357	11044361	YY1	TRANSFAC	yes		11039357	5000	112445810

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id
chr19	11492555	rs117580409	G	A	453198	Esophagus	0.400184	5442933
chr19	10520964	rs115771260	T	C	512480	Breast	0.451305	5436429
chr19	10805160	rs1975161	T	C	228284	Ovary	0.451974	5438371
chr19	11064073	rs55820791	C	T	24716	Thyroid	0.00933445	5440122
chr19	11046671	rs34944696	A	G	7314	Lung	0.00129625	5439913
chr19	10219076	rs11666402	T	C	814368	Adrenal	0.38537	5434722

Genomic Location	chr19:11033444-11039357[-]
TSS	11039357
Gene Name	YIPF2
Ensembl ID	ENSG00000130733.6
ENTREZID	78992
Uniprot
	K7ENM8
	Q9BWQ6
	A0A024R7E1
Protein Name
	Protein YIPF
	Protein YIPF2

EnhancerDB

Enhancers that regulate YIPF2[ENSG00000130733.6]

Transcript facotrs that regulate YIPF2[ENSG00000130733.6]

SNPs associated with YIPF2[ENSG00000130733.6], confirmed by eQTL

Details of YIPF2[ENSG00000130733.6]

Expression levels of YIPF2[ENSG00000130733.6]