EnhancerDB
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Enhancers that regulate EEFSEC[ENSG00000132394.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 127788243 127799375 enh35865 127872297 72922
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Colon (HCT116) Peripheral Blood (MM.1S) Uterus Thymus
chr3 127795566 127796407 vista42347 127872297 75890
VISTA
chr3 127799227 127799458 vista42348 127872297 72839
VISTA
chr3 127811485 127815639 enh35866 127872297 56658
Esophagus Astrocyte
chr3 127813021 127813267 vista42349 127872297 59030
VISTA
chr3 127831332 127831517 vista42350 127872297 40780
VISTA
chr3 127832245 127836395 enh7518 127872297 35902
Blood (Karpas-422)
chr3 127836825 127840975 enh7519 127872297 31322
Blood (Karpas-422)
chr3 127844025 127848175 enh97344 127872297 24122
Epithelial (MCF-7)
chr3 127862165 127866375 enh91464 127872297 5922
Bone Marrow (K562) Spleen
chr3 127884425 127919475 enh7520 127872297 12128
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Liver Bone (Osteoblast) Blood (OCI-LY7) Stomach Uterus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr3 127886942 127887322 vista42351 127872297 14645
VISTA
chr3 127922534 127929015 enh100091 127872297 50237
Uterus Brain (SK-N-SH)
chr3 127934665 127939228 enh77063 127872297 62368
Liver (HepG2) Brain (SK-N-SH) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9)
chr3 127939705 127963935 enh20904 127872297 67408
Cervix (HeLa-S3) Brain (SK-N-SH) Stomach Muscle (A673) Placenta Lung (PC-9) Blood (T-cell) Heart
chr3 127961659 127961905 vista42352 127872297 89362
VISTA
chr3 127962120 127962365 vista42353 127872297 89823
VISTA
chr3 127968819 127975475 enh20905 127872297 96522
Placenta Brain (SK-N-SH)
Transcript facotrs that regulate EEFSEC[ENSG00000132394.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with EEFSEC[ENSG00000132394.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 127991527 rs2811415 A G 0 Esophagus 0.0352707 7018174
chr3 127948060 rs4857877 A G 0 Heart 1.47594e-05 7017833
chr3 127469551 rs142094892 C CTA 402746 Pancreas 0.0811936 7014913
chr3 127287832 rs9873344 A G 584465 Breast 0.25778 7013837
chr3 128149392 rs4857886 C A 21907 Uterus 0.417065 7019757
chr3 128038689 rs12486127 C A 0 Liver 0.328286 7018572
chr3 128596786 rs55734728 C A,G,T 469301 Stomach 0.432591 7023204
Details of EEFSEC[ENSG00000132394.6]
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Genomic Location chr3:127872297-128127485[+]
TSS 127872297
Gene Name EEFSEC
Ensembl ID ENSG00000132394.6
ENTREZID 60678
Uniprot
P57772
Protein Name
Selenocysteine-specific elongation factor
Expression levels of EEFSEC[ENSG00000132394.6]
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