EnhancerDB
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Enhancers that regulate PRPH[ENSG00000135406.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 49590445 49597955 enh2325 49687035 89080
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Uterus Thymus Heart
chr12 49591156 49591248 vista13327 49687035 95787
VISTA
chr12 49592771 49592915 vista13328 49687035 94120
VISTA
chr12 49594805 49595186 vista13329 49687035 91849
VISTA
chr12 49595765 49596022 vista13330 49687035 91013
VISTA
chr12 49605493 49611219 enh29565 49687035 75816
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Adrenal Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr12 49614345 49621732 enh14696 49687035 65303
Brain (SK-N-SH) Large Intestine Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Uterus Stomach
chr12 49622598 49622695 vista13331 49687035 64340
VISTA
chr12 49623729 49631475 enh2326 49687035 55560
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
chr12 49624607 49624922 vista13332 49687035 62113
VISTA
chr12 49626851 49627096 vista13333 49687035 59939
VISTA
chr12 49628278 49628526 vista13334 49687035 58509
VISTA
chr12 49635979 49642155 enh14697 49687035 44880
Cervix (HeLa-S3) Astrocyte Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr12 49641026 49641246 vista13335 49687035 45789
VISTA
chr12 49644945 49649095 enh96297 49687035 37940
Epithelial (MCF-7)
chr12 49646906 49646981 vista13336 49687035 40054
VISTA
chr12 49651965 49661224 enh29566 49687035 25811
Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Stomach
chr12 49668765 49679836 enh14698 49687035 7199
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Muscle (A673) Placenta Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
chr12 49678404 49678529 vista13337 49687035 8506
VISTA
chr12 49693665 49700335 enh14699 49687035 6630
Bone Marrow (K562) Placenta
chr12 49695692 49695788 vista13338 49687035 8657
VISTA
chr12 49706632 49711755 enh86104 49687035 19597
Colon (HCT116) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9)
chr12 49739029 49739393 vista13339 49687035 51994
VISTA
chr12 49739970 49740063 vista13340 49687035 52935
VISTA
chr12 49757480 49764795 enh2327 49687035 70445
Uterus Bone (Osteoblast) Blood (Karpas-422)
chr12 49762011 49762098 vista13341 49687035 74976
VISTA
chr12 49766195 49770565 enh86105 49687035 79160
Colon (HCT116)
Transcript facotrs that regulate PRPH[ENSG00000135406.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with PRPH[ENSG00000135406.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 49529465 rs142793011 G C 157570 Esophagus 0.315859 2619411
chr12 50329800 rs149070181 C T 637335 Esophagus 0.330288 2624175
chr12 49678490 rs111996004 G A,T 8545 Breast 0.00327983 2620338
chr12 49143979 rs7954589 C A 543056 Liver 0.431105 2617929
chr12 50319192 rs114055844 C T 626727 Adrenal 0.400145 2624059
Details of PRPH[ENSG00000135406.9]
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Genomic Location chr12:49687035-49692465[+]
TSS 49687035
Gene Name PRPH
Ensembl ID ENSG00000135406.9
ENTREZID 5630
Uniprot
P41219
B3KWQ6
Protein Name
Peripherin
Peripherin-2
Expression levels of PRPH[ENSG00000135406.9]
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