EnhancerDB

Enhancers that regulate VPS53[ENSG00000141252.15]

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Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears	More
chr17	529745	533895	enh16915	624957	91062	Placenta
chr17	568965	574535	enh89835	624957	50422	Stomach Prostate (RWPE1) Lung (PC-9)
chr17	574639	574965	vista23616	624957	49992	VISTA
chr17	576455	576740	vista23617	624957	48217	VISTA
chr17	581785	587375	enh16916	624957	37582	Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Muscle (Myoblast) Muscle (Myotube)
chr17	592721	600015	enh16917	624957	24942	Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr17	594616	594984	vista23618	624957	29973	VISTA
chr17	595370	595681	vista23619	624957	29276	VISTA
chr17	597415	597783	vista23620	624957	27174	VISTA
chr17	654300	654699	vista23621	624957	29343	VISTA
chr17	690489	700425	enh52399	624957	65532	Large Intestine Esophagus Muscle (A673) Colon (HCT116) Pancreas Uterus Stomach
chr17	693293	693510	vista23622	624957	68336	VISTA
chr17	698193	698349	vista23623	624957	73236	VISTA

Transcript facotrs that regulate VPS53[ENSG00000141252.15]

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Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id	More

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id	More
chr17	449447	rs4968139	A	G	0	Esophagus	9.5902e-24	4684192
chr17	449447	rs4968139	A	G	0	Thyroid	1.89278e-51	4684192
chr17	407465	rs11247554	C	A	4443	Liver	6.00812e-08	4684019

Genomic Location	chr17:411908-624957[-]
TSS	624957
Gene Name	VPS53
Ensembl ID	ENSG00000141252.15
ENTREZID	55275
Uniprot
	Q5VIR6
	B3KS06
Protein Name
	Alternative protein VPS53
	VPS53 protein
	Vacuolar protein sorting-associated protein 53 homolog