EnhancerDB
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Enhancers that regulate SLC39A3[ENSG00000141873.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 2605719 2641695 enh4960 2740150 98455
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr19 2646545 2656295 enh48149 2740150 83855
Pancreas Spleen Thymus Stomach
chr19 2661905 2678135 enh4961 2740150 62015
Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
chr19 2664236 2664533 vista28247 2740150 75617
VISTA
chr19 2668275 2668465 vista28248 2740150 71685
VISTA
chr19 2678691 2682883 enh60737 2740150 57267
Blood (OCI-LY7)
chr19 2679436 2679769 vista28249 2740150 60381
VISTA
chr19 2685862 2686043 vista28250 2740150 54107
VISTA
chr19 2691745 2701695 enh60738 2740150 38455
Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Pancreas Heart
chr19 2695163 2695542 vista28251 2740150 44608
VISTA
chr19 2700809 2701070 vista28252 2740150 39080
VISTA
chr19 2708408 2714025 enh32875 2740150 26125
Astrocyte Bone (Osteoblast) Blood (OCI-LY7)
chr19 2711591 2711804 vista28253 2740150 28346
VISTA
chr19 2719845 2720284 vista28254 2740150 19866
VISTA
chr19 2727085 2731235 enh17852 2740150 8915
Placenta
chr19 2745378 2751582 enh60739 2740150 5228
Prostate (RWPE1) Blood (OCI-LY7) Blood (GM12878) Pancreas Spleen
chr19 2750958 2751083 vista28255 2740150 10808
VISTA
chr19 2769885 2777455 enh4962 2740150 29735
Muscle (Myoblast) Blood (Karpas-422) Stomach
chr19 2770206 2770498 vista28256 2740150 30056
VISTA
chr19 2775094 2775492 vista28257 2740150 34944
VISTA
chr19 2775891 2776162 vista28258 2740150 35741
VISTA
chr19 2786045 2790195 enh4963 2740150 45895
Blood (Karpas-422)
chr19 2789518 2789719 vista28259 2740150 49368
VISTA
chr19 2794977 2799127 enh65165 2740150 54827
Heart
chr19 2804437 2804563 vista28260 2740150 64287
VISTA
Transcript facotrs that regulate SLC39A3[ENSG00000141873.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SLC39A3[ENSG00000141873.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 1811477 rs45584038 C A,T 920725 Esophagus 0.187551 5378500
chr19 2774460 rs4624312 T C 34310 Esophagus 0.195481 5388866
chr19 3065029 rs66592260 G A 324879 Esophagus 0.116245 5390859
chr19 3396200 rs146345146 C T 656050 Heart 0.284913 5394029
chr19 2661703 rs55748917 G A 70499 Spleen 0.0743683 5387647
chr19 3492995 rs75918375 G A,C 752845 Liver 0.409348 5394926
chr19 2067027 rs10405303 A G 665175 Stomach 0.276049 5381027
chr19 2469404 rs12982381 C T 262798 Adrenal 0.356153 5384463
Details of SLC39A3[ENSG00000141873.6]
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Genomic Location chr19:2732202-2740150[-]
TSS 2740150
Gene Name SLC39A3
Ensembl ID ENSG00000141873.6
ENTREZID 29985
Uniprot
Q9BRY0
Protein Name
Zinc transporter ZIP3
Expression levels of SLC39A3[ENSG00000141873.6]
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